data_6I2 # _chem_comp.id 6I2 _chem_comp.name "{2-[(3-{[4-(2-{[(3-{[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}phenyl)methyl]amino}ethyl)piperazin-1-yl]methyl}phenyl)ethynyl]-5-methyl-1-benzofuran-3-yl}acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C46 H43 N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-08-05 _chem_comp.pdbx_modified_date 2022-08-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 733.850 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6I2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RQ0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6I2 C10 C1 C 0 1 Y N N 4.101 21.881 -26.176 -6.936 1.895 0.173 C10 6I2 1 6I2 C13 C2 C 0 1 Y N N 2.624 22.059 -23.839 -4.837 3.629 0.686 C13 6I2 2 6I2 C15 C3 C 0 1 N N N 4.047 20.224 -22.750 -3.762 3.091 -1.511 C15 6I2 3 6I2 C17 C4 C 0 1 N N N 2.568 18.999 -21.368 -1.717 2.090 -2.335 C17 6I2 4 6I2 C20 C5 C 0 1 N N N 3.024 18.664 -17.598 1.051 0.313 -0.499 C20 6I2 5 6I2 C21 C6 C 0 1 N N N 3.847 19.621 -16.661 1.870 0.774 0.709 C21 6I2 6 6I2 C24 C7 C 0 1 Y N N 1.815 19.455 -13.502 4.823 -0.813 2.381 C24 6I2 7 6I2 C26 C8 C 0 1 Y N N 1.295 19.106 -11.190 7.051 -1.628 1.995 C26 6I2 8 6I2 C28 C9 C 0 1 N N N 1.830 17.430 -9.113 9.367 -1.399 0.824 C28 6I2 9 6I2 C01 C10 C 0 1 N N N 10.679 20.122 -33.921 -14.927 -4.077 -0.604 C01 6I2 10 6I2 C02 C11 C 0 1 Y N N 9.876 20.032 -32.619 -13.634 -3.388 -0.955 C02 6I2 11 6I2 C03 C12 C 0 1 Y N N 10.142 19.022 -31.680 -13.013 -3.660 -2.165 C03 6I2 12 6I2 C04 C13 C 0 1 Y N N 9.402 18.956 -30.491 -11.829 -3.040 -2.506 C04 6I2 13 6I2 C05 C14 C 0 1 Y N N 8.391 19.924 -30.253 -11.247 -2.132 -1.631 C05 6I2 14 6I2 C07 C15 C 0 1 Y N N 6.772 21.117 -29.410 -9.986 -0.644 -0.567 C07 6I2 15 6I2 C08 C16 C 0 1 N N N 5.724 21.511 -28.359 -8.904 0.257 -0.305 C08 6I2 16 6I2 C09 C17 C 0 1 N N N 4.966 21.720 -27.448 -8.017 0.995 -0.090 C09 6I2 17 6I2 C11 C18 C 0 1 Y N N 3.057 22.788 -26.101 -6.896 2.616 1.370 C11 6I2 18 6I2 C12 C19 C 0 1 Y N N 2.312 22.880 -24.925 -5.848 3.478 1.618 C12 6I2 19 6I2 C14 C20 C 0 1 Y N N 3.663 21.152 -23.932 -4.869 2.919 -0.502 C14 6I2 20 6I2 C18 C21 C 0 1 N N N 2.285 18.609 -19.912 -0.670 1.009 -2.054 C18 6I2 21 6I2 C23 C22 C 0 1 N N N 2.579 18.983 -14.766 3.743 0.209 2.135 C23 6I2 22 6I2 C25 C23 C 0 1 Y N N 1.966 18.721 -12.340 6.050 -0.679 1.766 C25 6I2 23 6I2 C27 C24 C 0 1 N N N 1.547 18.220 -9.965 8.323 -1.502 1.352 C27 6I2 24 6I2 C29 C25 C 0 1 Y N N 2.263 16.367 -8.094 10.640 -1.273 0.181 C29 6I2 25 6I2 C30 C26 C 0 1 Y N N 1.624 16.120 -6.866 10.994 -0.268 -0.665 C30 6I2 26 6I2 C31 C27 C 0 1 N N N 0.380 16.798 -6.290 10.141 0.898 -1.094 C31 6I2 27 6I2 C32 C28 C 0 1 N N N -0.866 15.875 -6.437 10.338 2.044 -0.135 C32 6I2 28 6I2 C35 C29 C 0 1 Y N N 2.399 15.047 -6.288 12.370 -0.549 -1.075 C35 6I2 29 6I2 C36 C30 C 0 1 Y N N 2.301 14.334 -5.095 13.285 0.090 -1.914 C36 6I2 30 6I2 C37 C31 C 0 1 Y N N 3.228 13.334 -4.821 14.531 -0.445 -2.090 C37 6I2 31 6I2 C38 C32 C 0 1 N N N 3.097 12.565 -3.498 15.520 0.243 -2.996 C38 6I2 32 6I2 C39 C33 C 0 1 Y N N 4.252 13.046 -5.732 14.890 -1.617 -1.441 C39 6I2 33 6I2 C40 C34 C 0 1 Y N N 4.358 13.761 -6.928 14.000 -2.263 -0.607 C40 6I2 34 6I2 C41 C35 C 0 1 Y N N 3.415 14.766 -7.201 12.729 -1.738 -0.414 C41 6I2 35 6I2 C43 C36 C 0 1 Y N N 0.469 20.220 -11.177 6.798 -2.707 2.848 C43 6I2 36 6I2 C44 C37 C 0 1 Y N N 0.320 20.952 -12.352 5.570 -2.821 3.464 C44 6I2 37 6I2 C45 C38 C 0 1 Y N N 0.991 20.570 -13.515 4.582 -1.881 3.227 C45 6I2 38 6I2 C46 C39 C 0 1 N N N 3.572 20.461 -19.107 -0.995 1.314 0.326 C46 6I2 39 6I2 C47 C40 C 0 1 N N N 3.927 20.920 -20.526 -2.041 2.395 0.044 C47 6I2 40 6I2 C48 C41 C 0 1 Y N N 4.415 21.062 -25.099 -5.910 2.054 -0.765 C48 6I2 41 6I2 C49 C42 C 0 1 Y N N 7.039 21.741 -30.638 -11.031 -0.879 0.272 C49 6I2 42 6I2 C50 C43 C 0 1 N N N 6.393 22.981 -31.269 -11.264 -0.257 1.625 C50 6I2 43 6I2 C51 C44 C 0 1 N N N 7.330 24.185 -31.174 -12.071 1.006 1.464 C51 6I2 44 6I2 C54 C45 C 0 1 Y N N 8.132 20.923 -31.183 -11.881 -1.859 -0.404 C54 6I2 45 6I2 C55 C46 C 0 1 Y N N 8.878 20.982 -32.372 -13.083 -2.493 -0.080 C55 6I2 46 6I2 N16 N1 N 0 1 N N N 3.120 20.350 -21.601 -2.697 2.116 -1.241 N16 6I2 47 6I2 N19 N2 N 0 1 N N N 3.363 19.016 -19.025 -0.014 1.288 -0.769 N19 6I2 48 6I2 N22 N3 N 0 1 N N N 2.979 20.133 -15.578 2.935 -0.201 0.979 N22 6I2 49 6I2 O06 O1 O 0 1 Y N N 7.560 20.082 -29.226 -10.124 -1.387 -1.684 O06 6I2 50 6I2 O33 O2 O 0 1 N N N -1.234 15.518 -7.593 11.094 1.926 0.800 O33 6I2 51 6I2 O34 O3 O 0 1 N N N -1.505 15.468 -5.416 9.675 3.196 -0.321 O34 6I2 52 6I2 O42 O4 O 0 1 Y N N 3.287 15.576 -8.250 11.672 -2.129 0.326 O42 6I2 53 6I2 O52 O5 O 0 1 N N N 7.713 24.802 -32.200 -12.420 1.364 0.364 O52 6I2 54 6I2 O53 O6 O 0 1 N N N 7.741 24.545 -30.048 -12.401 1.733 2.542 O53 6I2 55 6I2 H1 H1 H 0 1 N N N 2.053 22.133 -22.925 -4.018 4.305 0.885 H1 6I2 56 6I2 H2 H2 H 0 1 N N N 4.032 19.182 -23.101 -4.157 2.929 -2.514 H2 6I2 57 6I2 H3 H3 H 0 1 N N N 5.062 20.484 -22.414 -3.358 4.100 -1.438 H3 6I2 58 6I2 H4 H4 H 0 1 N N N 1.620 18.927 -21.922 -1.226 3.061 -2.406 H4 6I2 59 6I2 H5 H5 H 0 1 N N N 3.286 18.272 -21.774 -2.224 1.869 -3.274 H5 6I2 60 6I2 H6 H6 H 0 1 N N N 1.947 18.804 -17.423 1.701 0.235 -1.370 H6 6I2 61 6I2 H7 H7 H 0 1 N N N 3.295 17.617 -17.396 0.607 -0.660 -0.287 H7 6I2 62 6I2 H8 H8 H 0 1 N N N 4.689 19.066 -16.222 2.313 1.747 0.497 H8 6I2 63 6I2 H9 H9 H 0 1 N N N 4.232 20.466 -17.250 1.219 0.852 1.580 H9 6I2 64 6I2 H10 H10 H 0 1 N N N 11.564 20.756 -33.763 -15.766 -3.483 -0.966 H10 6I2 65 6I2 H11 H11 H 0 1 N N N 10.999 19.114 -34.225 -14.952 -5.062 -1.071 H11 6I2 66 6I2 H12 H12 H 0 1 N N N 10.050 20.560 -34.710 -14.999 -4.186 0.478 H12 6I2 67 6I2 H13 H13 H 0 1 N N N 10.917 18.296 -31.874 -13.462 -4.366 -2.849 H13 6I2 68 6I2 H14 H14 H 0 1 N N N 9.598 18.180 -29.766 -11.355 -3.261 -3.451 H14 6I2 69 6I2 H15 H15 H 0 1 N N N 2.822 23.419 -26.946 -7.685 2.500 2.098 H15 6I2 70 6I2 H16 H16 H 0 1 N N N 1.496 23.584 -24.855 -5.816 4.035 2.542 H16 6I2 71 6I2 H17 H17 H 0 1 N N N 1.354 19.096 -19.587 -1.157 0.035 -2.009 H17 6I2 72 6I2 H18 H18 H 0 1 N N N 2.168 17.517 -19.852 0.074 1.008 -2.850 H18 6I2 73 6I2 H19 H19 H 0 1 N N N 1.926 18.328 -15.361 3.106 0.284 3.016 H19 6I2 74 6I2 H20 H20 H 0 1 N N N 3.476 18.425 -14.460 4.200 1.178 1.933 H20 6I2 75 6I2 H21 H21 H 0 1 N N N 2.605 17.850 -12.329 6.238 0.157 1.108 H21 6I2 76 6I2 H22 H22 H 0 1 N N N 0.547 17.013 -5.224 10.430 1.210 -2.098 H22 6I2 77 6I2 H23 H23 H 0 1 N N N 0.198 17.739 -6.830 9.092 0.601 -1.094 H23 6I2 78 6I2 H24 H24 H 0 1 N N N 1.513 14.556 -4.390 13.010 1.003 -2.422 H24 6I2 79 6I2 H25 H25 H 0 1 N N N 3.677 13.077 -2.716 16.107 0.956 -2.417 H25 6I2 80 6I2 H26 H26 H 0 1 N N N 2.039 12.524 -3.201 16.184 -0.500 -3.438 H26 6I2 81 6I2 H27 H27 H 0 1 N N N 3.481 11.543 -3.629 14.985 0.768 -3.786 H27 6I2 82 6I2 H28 H28 H 0 1 N N N 4.965 12.266 -5.509 15.878 -2.029 -1.589 H28 6I2 83 6I2 H29 H29 H 0 1 N N N 5.150 13.545 -7.630 14.291 -3.175 -0.107 H29 6I2 84 6I2 H30 H30 H 0 1 N N N -0.047 20.513 -10.275 7.563 -3.449 3.024 H30 6I2 85 6I2 H31 H31 H 0 1 N N N -0.320 21.822 -12.364 5.373 -3.654 4.123 H31 6I2 86 6I2 H32 H32 H 0 1 N N N 0.869 21.142 -14.423 3.619 -1.980 3.706 H32 6I2 87 6I2 H33 H33 H 0 1 N N N 4.394 20.738 -18.430 -0.487 1.535 1.264 H33 6I2 88 6I2 H34 H34 H 0 1 N N N 2.649 20.970 -18.791 -1.485 0.343 0.397 H34 6I2 89 6I2 H35 H35 H 0 1 N N N 4.977 20.652 -20.714 -2.786 2.396 0.840 H35 6I2 90 6I2 H36 H36 H 0 1 N N N 3.815 22.014 -20.564 -1.554 3.369 0.000 H36 6I2 91 6I2 H37 H37 H 0 1 N N N 5.235 20.362 -25.167 -5.933 1.500 -1.691 H37 6I2 92 6I2 H38 H38 H 0 1 N N N 5.456 23.209 -30.739 -11.809 -0.957 2.258 H38 6I2 93 6I2 H39 H39 H 0 1 N N N 6.175 22.776 -32.327 -10.306 -0.019 2.086 H39 6I2 94 6I2 H40 H40 H 0 1 N N N 8.682 21.760 -33.095 -13.572 -2.281 0.859 H40 6I2 95 6I2 H43 H43 H 0 1 N N N 3.482 20.790 -15.017 2.553 -1.125 1.115 H43 6I2 96 6I2 H45 H45 H 0 1 N N N -2.223 14.911 -5.693 9.834 3.903 0.320 H45 6I2 97 6I2 H46 H46 H 0 1 N N N 8.325 25.287 -30.146 -12.920 2.535 2.389 H46 6I2 98 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6I2 C01 C02 SING N N 1 6I2 C02 C55 DOUB Y N 2 6I2 C02 C03 SING Y N 3 6I2 C55 C54 SING Y N 4 6I2 O52 C51 DOUB N N 5 6I2 C03 C04 DOUB Y N 6 6I2 C50 C51 SING N N 7 6I2 C50 C49 SING N N 8 6I2 C54 C49 SING Y N 9 6I2 C54 C05 DOUB Y N 10 6I2 C51 O53 SING N N 11 6I2 C49 C07 DOUB Y N 12 6I2 C04 C05 SING Y N 13 6I2 C05 O06 SING Y N 14 6I2 C07 O06 SING Y N 15 6I2 C07 C08 SING N N 16 6I2 C08 C09 TRIP N N 17 6I2 C09 C10 SING N N 18 6I2 C10 C11 DOUB Y N 19 6I2 C10 C48 SING Y N 20 6I2 C11 C12 SING Y N 21 6I2 C48 C14 DOUB Y N 22 6I2 C12 C13 DOUB Y N 23 6I2 C14 C13 SING Y N 24 6I2 C14 C15 SING N N 25 6I2 C15 N16 SING N N 26 6I2 N16 C17 SING N N 27 6I2 N16 C47 SING N N 28 6I2 C17 C18 SING N N 29 6I2 C47 C46 SING N N 30 6I2 C18 N19 SING N N 31 6I2 C46 N19 SING N N 32 6I2 N19 C20 SING N N 33 6I2 C20 C21 SING N N 34 6I2 C21 N22 SING N N 35 6I2 N22 C23 SING N N 36 6I2 C23 C24 SING N N 37 6I2 C45 C24 DOUB Y N 38 6I2 C45 C44 SING Y N 39 6I2 C24 C25 SING Y N 40 6I2 C44 C43 DOUB Y N 41 6I2 C25 C26 DOUB Y N 42 6I2 C26 C43 SING Y N 43 6I2 C26 C27 SING N N 44 6I2 C27 C28 TRIP N N 45 6I2 C28 C29 SING N N 46 6I2 O42 C29 SING Y N 47 6I2 O42 C41 SING Y N 48 6I2 C29 C30 DOUB Y N 49 6I2 O33 C32 DOUB N N 50 6I2 C41 C40 DOUB Y N 51 6I2 C41 C35 SING Y N 52 6I2 C40 C39 SING Y N 53 6I2 C30 C31 SING N N 54 6I2 C30 C35 SING Y N 55 6I2 C32 C31 SING N N 56 6I2 C32 O34 SING N N 57 6I2 C35 C36 DOUB Y N 58 6I2 C39 C37 DOUB Y N 59 6I2 C36 C37 SING Y N 60 6I2 C37 C38 SING N N 61 6I2 C13 H1 SING N N 62 6I2 C15 H2 SING N N 63 6I2 C15 H3 SING N N 64 6I2 C17 H4 SING N N 65 6I2 C17 H5 SING N N 66 6I2 C20 H6 SING N N 67 6I2 C20 H7 SING N N 68 6I2 C21 H8 SING N N 69 6I2 C21 H9 SING N N 70 6I2 C01 H10 SING N N 71 6I2 C01 H11 SING N N 72 6I2 C01 H12 SING N N 73 6I2 C03 H13 SING N N 74 6I2 C04 H14 SING N N 75 6I2 C11 H15 SING N N 76 6I2 C12 H16 SING N N 77 6I2 C18 H17 SING N N 78 6I2 C18 H18 SING N N 79 6I2 C23 H19 SING N N 80 6I2 C23 H20 SING N N 81 6I2 C25 H21 SING N N 82 6I2 C31 H22 SING N N 83 6I2 C31 H23 SING N N 84 6I2 C36 H24 SING N N 85 6I2 C38 H25 SING N N 86 6I2 C38 H26 SING N N 87 6I2 C38 H27 SING N N 88 6I2 C39 H28 SING N N 89 6I2 C40 H29 SING N N 90 6I2 C43 H30 SING N N 91 6I2 C44 H31 SING N N 92 6I2 C45 H32 SING N N 93 6I2 C46 H33 SING N N 94 6I2 C46 H34 SING N N 95 6I2 C47 H35 SING N N 96 6I2 C47 H36 SING N N 97 6I2 C48 H37 SING N N 98 6I2 C50 H38 SING N N 99 6I2 C50 H39 SING N N 100 6I2 C55 H40 SING N N 101 6I2 N22 H43 SING N N 102 6I2 O34 H45 SING N N 103 6I2 O53 H46 SING N N 104 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6I2 SMILES ACDLabs 12.01 "O=C(O)Cc1c2cc(C)ccc2oc1C#Cc1cccc(c1)CNCCN1CCN(CC1)Cc1cccc(c1)C#Cc1oc2ccc(C)cc2c1CC(=O)O" 6I2 InChI InChI 1.03 "InChI=1S/C46H43N3O6/c1-31-9-13-41-37(23-31)39(27-45(50)51)43(54-41)15-11-33-5-3-7-35(25-33)29-47-17-18-48-19-21-49(22-20-48)30-36-8-4-6-34(26-36)12-16-44-40(28-46(52)53)38-24-32(2)10-14-42(38)55-44/h3-10,13-14,23-26,47H,17-22,27-30H2,1-2H3,(H,50,51)(H,52,53)" 6I2 InChIKey InChI 1.03 PQJUNYNNRHSPEP-UHFFFAOYSA-N 6I2 SMILES_CANONICAL CACTVS 3.385 "Cc1ccc2oc(C#Cc3cccc(CNCCN4CCN(CC4)Cc5cccc(c5)C#Cc6oc7ccc(C)cc7c6CC(O)=O)c3)c(CC(O)=O)c2c1" 6I2 SMILES CACTVS 3.385 "Cc1ccc2oc(C#Cc3cccc(CNCCN4CCN(CC4)Cc5cccc(c5)C#Cc6oc7ccc(C)cc7c6CC(O)=O)c3)c(CC(O)=O)c2c1" 6I2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1)c(c(o2)C#Cc3cccc(c3)CNCCN4CCN(CC4)Cc5cccc(c5)C#Cc6c(c7cc(ccc7o6)C)CC(=O)O)CC(=O)O" 6I2 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc2c(c1)c(c(o2)C#Cc3cccc(c3)CNCCN4CCN(CC4)Cc5cccc(c5)C#Cc6c(c7cc(ccc7o6)C)CC(=O)O)CC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6I2 "SYSTEMATIC NAME" ACDLabs 12.01 "{2-[(3-{[4-(2-{[(3-{[3-(carboxymethyl)-5-methyl-1-benzofuran-2-yl]ethynyl}phenyl)methyl]amino}ethyl)piperazin-1-yl]methyl}phenyl)ethynyl]-5-methyl-1-benzofuran-3-yl}acetic acid" 6I2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[2-[2-[3-[[2-[4-[[3-[2-[3-(2-hydroxy-2-oxoethyl)-5-methyl-1-benzofuran-2-yl]ethynyl]phenyl]methyl]piperazin-1-yl]ethylamino]methyl]phenyl]ethynyl]-5-methyl-1-benzofuran-3-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6I2 "Create component" 2021-08-05 RCSB 6I2 "Initial release" 2022-08-10 RCSB #