data_6IO # _chem_comp.id 6IO _chem_comp.name "~{N}1,~{N}4-bis[2-(trifluoromethyl)pyrimidin-4-yl]cyclohexane-1,4-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H16 F6 N6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-08-02 _chem_comp.pdbx_modified_date 2021-11-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 406.329 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6IO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7PAV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6IO C1 C1 C 0 1 Y N N 58.047 1.240 96.991 -3.606 1.507 0.762 C1 6IO 1 6IO C2 C2 C 0 1 Y N N 58.250 9.542 98.732 4.072 1.745 0.833 C2 6IO 2 6IO C3 C3 C 0 1 Y N N 57.635 0.100 96.344 -4.812 1.466 1.434 C3 6IO 3 6IO C7 C4 C 0 1 Y N N 56.053 -0.208 97.902 -5.391 -0.427 0.262 C7 6IO 4 6IO C8 C5 C 0 1 Y N N 57.798 9.831 101.329 5.273 -0.580 0.257 C8 6IO 5 6IO C9 C6 C 0 1 N N N 55.957 3.971 99.694 -0.273 1.733 -1.884 C9 6IO 6 6IO C10 C7 C 0 1 N N N 58.186 4.135 100.755 -0.278 1.167 0.550 C10 6IO 7 6IO C11 C8 C 0 1 N N N 56.234 5.247 98.917 0.766 2.826 -1.627 C11 6IO 8 6IO C12 C9 C 0 1 N N N 58.490 5.403 99.981 0.761 2.260 0.806 C12 6IO 9 6IO C13 C10 C 0 1 N N N 57.241 3.218 99.999 -1.152 1.563 -0.642 C13 6IO 10 6IO C14 C11 C 0 1 N N N 57.216 6.148 99.636 1.639 2.430 -0.435 C14 6IO 11 6IO C15 C12 C 0 1 N N N 54.925 -1.001 98.458 -6.397 -1.516 -0.010 C15 6IO 12 6IO C16 C13 C 0 1 N N N 57.528 9.923 102.789 5.954 -1.886 -0.061 C16 6IO 13 6IO N18 N1 N 0 1 Y N N 58.282 10.904 100.702 5.826 0.234 1.133 N18 6IO 14 6IO C4 C14 C 0 1 Y N N 58.491 10.719 99.398 5.260 1.393 1.442 C4 6IO 15 6IO C5 C15 C 0 1 Y N N 57.389 1.626 98.136 -3.340 0.515 -0.184 C5 6IO 16 6IO C6 C16 C 0 1 Y N N 57.761 8.487 99.468 3.512 0.860 -0.090 C6 6IO 17 6IO N17 N2 N 0 1 Y N N 56.629 -0.655 96.780 -5.671 0.495 1.161 N17 6IO 18 6IO N19 N3 N 0 1 Y N N 56.374 0.885 98.596 -4.250 -0.430 -0.399 N19 6IO 19 6IO N20 N4 N 0 1 Y N N 57.535 8.644 100.781 4.140 -0.284 -0.347 N20 6IO 20 6IO N21 N5 N 0 1 N N N 57.875 2.810 98.750 -2.147 0.516 -0.888 N21 6IO 21 6IO N22 N6 N 0 1 N N N 57.528 7.275 98.771 2.321 1.167 -0.728 N22 6IO 22 6IO F23 F1 F 0 1 N N N 53.720 -0.434 98.208 -6.061 -2.176 -1.197 F23 6IO 23 6IO F24 F2 F 0 1 N N N 55.000 -1.153 99.800 -6.392 -2.430 1.049 F24 6IO 24 6IO F25 F3 F 0 1 N N N 54.850 -2.268 97.991 -7.671 -0.952 -0.134 F25 6IO 25 6IO F26 F4 F 0 1 N N N 56.208 10.126 103.032 6.924 -2.155 0.910 F26 6IO 26 6IO F27 F5 F 0 1 N N N 57.847 8.783 103.456 5.006 -2.915 -0.072 F27 6IO 27 6IO F28 F6 F 0 1 N N N 58.204 10.918 103.425 6.563 -1.800 -1.317 F28 6IO 28 6IO H1 H1 H 0 1 N N N 58.872 1.822 96.608 -2.888 2.289 0.961 H1 6IO 29 6IO H2 H2 H 0 1 N N N 58.437 9.448 97.672 3.586 2.680 1.068 H2 6IO 30 6IO H3 H3 H 0 1 N N N 58.150 -0.197 95.442 -5.052 2.217 2.172 H3 6IO 31 6IO H4 H4 H 0 1 N N N 55.460 4.229 100.641 -0.896 2.015 -2.733 H4 6IO 32 6IO H5 H5 H 0 1 N N N 55.296 3.325 99.097 0.234 0.793 -2.101 H5 6IO 33 6IO H6 H6 H 0 1 N N N 59.128 3.598 100.941 0.229 0.227 0.332 H6 6IO 34 6IO H7 H7 H 0 1 N N N 57.724 4.408 101.715 -0.904 1.046 1.434 H7 6IO 35 6IO H8 H8 H 0 1 N N N 55.288 5.791 98.779 1.391 2.947 -2.512 H8 6IO 36 6IO H9 H9 H 0 1 N N N 56.650 4.981 97.934 0.258 3.766 -1.410 H9 6IO 37 6IO H10 H10 H 0 1 N N N 59.016 5.140 99.051 0.253 3.200 1.024 H10 6IO 38 6IO H11 H11 H 0 1 N N N 59.132 6.053 100.594 1.383 1.978 1.656 H11 6IO 39 6IO H12 H12 H 0 1 N N N 57.012 2.337 100.617 -1.659 2.502 -0.425 H12 6IO 40 6IO H13 H13 H 0 1 N N N 56.753 6.511 100.565 2.379 3.209 -0.252 H13 6IO 41 6IO H14 H14 H 0 1 N N N 58.876 11.551 98.827 5.723 2.053 2.161 H14 6IO 42 6IO H15 H15 H 0 1 N N N 58.848 2.675 98.936 -1.970 -0.177 -1.543 H15 6IO 43 6IO H16 H16 H 0 1 N N N 56.760 7.414 98.146 1.939 0.547 -1.367 H16 6IO 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6IO C3 N17 DOUB Y N 1 6IO C3 C1 SING Y N 2 6IO N17 C7 SING Y N 3 6IO C1 C5 DOUB Y N 4 6IO C7 C15 SING N N 5 6IO C7 N19 DOUB Y N 6 6IO F25 C15 SING N N 7 6IO C5 N19 SING Y N 8 6IO C5 N21 SING N N 9 6IO F23 C15 SING N N 10 6IO C15 F24 SING N N 11 6IO C2 C4 DOUB Y N 12 6IO C2 C6 SING Y N 13 6IO N21 C13 SING N N 14 6IO N22 C6 SING N N 15 6IO N22 C14 SING N N 16 6IO C11 C14 SING N N 17 6IO C11 C9 SING N N 18 6IO C4 N18 SING Y N 19 6IO C6 N20 DOUB Y N 20 6IO C14 C12 SING N N 21 6IO C9 C13 SING N N 22 6IO C12 C10 SING N N 23 6IO C13 C10 SING N N 24 6IO N18 C8 DOUB Y N 25 6IO N20 C8 SING Y N 26 6IO C8 C16 SING N N 27 6IO C16 F26 SING N N 28 6IO C16 F28 SING N N 29 6IO C16 F27 SING N N 30 6IO C1 H1 SING N N 31 6IO C2 H2 SING N N 32 6IO C3 H3 SING N N 33 6IO C9 H4 SING N N 34 6IO C9 H5 SING N N 35 6IO C10 H6 SING N N 36 6IO C10 H7 SING N N 37 6IO C11 H8 SING N N 38 6IO C11 H9 SING N N 39 6IO C12 H10 SING N N 40 6IO C12 H11 SING N N 41 6IO C13 H12 SING N N 42 6IO C14 H13 SING N N 43 6IO C4 H14 SING N N 44 6IO N21 H15 SING N N 45 6IO N22 H16 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6IO InChI InChI 1.03 "InChI=1S/C16H16F6N6/c17-15(18,19)13-23-7-5-11(27-13)25-9-1-2-10(4-3-9)26-12-6-8-24-14(28-12)16(20,21)22/h5-10H,1-4H2,(H,23,25,27)(H,24,26,28)/t9-,10+" 6IO InChIKey InChI 1.03 AWHJAHLJFNFTGF-AOOOYVTPSA-N 6IO SMILES_CANONICAL CACTVS 3.385 "FC(F)(F)c1nccc(N[C@@H]2CC[C@@H](CC2)Nc3ccnc(n3)C(F)(F)F)n1" 6IO SMILES CACTVS 3.385 "FC(F)(F)c1nccc(N[CH]2CC[CH](CC2)Nc3ccnc(n3)C(F)(F)F)n1" 6IO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cnc(nc1NC2CCC(CC2)Nc3ccnc(n3)C(F)(F)F)C(F)(F)F" 6IO SMILES "OpenEye OEToolkits" 2.0.7 "c1cnc(nc1NC2CCC(CC2)Nc3ccnc(n3)C(F)(F)F)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id 6IO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}1,~{N}4-bis[2-(trifluoromethyl)pyrimidin-4-yl]cyclohexane-1,4-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6IO "Create component" 2021-08-02 PDBE 6IO "Initial release" 2021-11-17 RCSB ##