data_6JI # _chem_comp.id 6JI _chem_comp.name "5-[(1R,2S,4R,6R,7R,10S,11S,14S,16R)-14-hydroxy-7,11-dimethyl-3-oxapentacyclo[8.8.0.02,4.02,7.011,16]octadecan-6-yl]pyran-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H32 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Resibufogenin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-02-15 _chem_comp.pdbx_modified_date 2022-02-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 384.508 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6JI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7W0Z _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6JI O4 O1 O 0 1 N N N 28.116 37.221 44.098 1.408 -1.370 -0.015 O4 6JI 1 6JI C4 C1 C 0 1 N N N 30.272 30.177 45.700 -4.454 1.009 -1.160 C4 6JI 2 6JI C3 C2 C 0 1 N N N 29.568 31.447 46.170 -4.221 1.354 0.313 C3 6JI 3 6JI O3 O2 O 0 1 N N N 29.407 40.920 48.703 4.905 -1.283 -0.335 O3 6JI 4 6JI C2 C3 C 0 1 N N S 29.694 32.603 45.160 -3.192 0.390 0.906 C2 6JI 5 6JI O2 O3 O 0 1 N N N 29.608 43.012 48.099 6.739 -0.975 0.878 O2 6JI 6 6JI C1 C4 C 0 1 N N N 31.185 32.973 45.027 -2.954 0.739 2.377 C1 6JI 7 6JI O1 O4 O 0 1 N N N 30.731 29.340 43.464 -6.205 -0.542 -0.554 O1 6JI 8 6JI C10 C5 C 0 1 N N R 29.059 34.933 44.510 -0.850 -0.450 0.755 C10 6JI 9 6JI C11 C6 C 0 1 N N S 28.846 33.841 45.568 -1.877 0.503 0.136 C11 6JI 10 6JI C12 C7 C 0 1 N N N 29.022 34.368 47.003 -1.338 1.931 0.204 C12 6JI 11 6JI C13 C8 C 0 1 N N N 29.789 35.701 47.110 -0.092 2.046 -0.676 C13 6JI 12 6JI C14 C9 C 0 1 N N R 29.238 36.854 46.240 1.020 1.147 -0.131 C14 6JI 13 6JI C15 C10 C 0 1 N N N 30.386 37.713 45.693 1.599 1.703 1.172 C15 6JI 14 6JI C16 C11 C 0 1 N N R 28.160 37.791 46.918 2.113 1.007 -1.224 C16 6JI 15 6JI C17 C12 C 0 1 N N N 28.555 39.227 47.186 3.396 0.482 -0.632 C17 6JI 16 6JI C18 C13 C 0 1 N N N 28.385 40.214 46.222 4.206 1.323 0.150 C18 6JI 17 6JI C19 C14 C 0 1 N N N 28.740 41.532 46.471 5.363 0.826 0.674 C19 6JI 18 6JI C20 C15 C 0 1 N N N 29.267 41.909 47.749 5.709 -0.513 0.417 C20 6JI 19 6JI C21 C16 C 0 1 N N N 29.060 39.613 48.442 3.768 -0.796 -0.853 C21 6JI 20 6JI C22 C17 C 0 1 N N N 26.838 37.616 46.143 1.490 -0.029 -2.193 C22 6JI 21 6JI C23 C18 C 0 1 N N R 27.117 36.685 44.994 0.795 -1.045 -1.262 C23 6JI 22 6JI C24 C19 C 0 1 N N S 28.494 36.207 45.080 0.481 -0.287 0.036 C24 6JI 23 6JI C5 C20 C 0 1 N N S 29.685 29.658 44.403 -4.975 -0.426 -1.270 C5 6JI 24 6JI C6 C21 C 0 1 N N N 28.702 30.645 43.797 -3.945 -1.389 -0.677 C6 6JI 25 6JI C7 C22 C 0 1 N N R 29.159 32.110 43.785 -3.714 -1.046 0.796 C7 6JI 26 6JI C8 C23 C 0 1 N N N 28.043 32.999 43.229 -2.687 -2.013 1.388 C8 6JI 27 6JI C9 C24 C 0 1 N N N 28.392 34.487 43.211 -1.361 -1.885 0.633 C9 6JI 28 6JI H1 H1 H 0 1 N N N 30.166 29.403 46.474 -5.188 1.695 -1.582 H1 6JI 29 6JI H2 H2 H 0 1 N N N 31.339 30.397 45.546 -3.516 1.098 -1.707 H2 6JI 30 6JI H3 H3 H 0 1 N N N 30.013 31.764 47.125 -3.850 2.375 0.392 H3 6JI 31 6JI H4 H4 H 0 1 N N N 28.501 31.224 46.319 -5.160 1.265 0.859 H4 6JI 32 6JI H5 H5 H 0 1 N N N 31.565 33.322 45.999 -2.576 1.759 2.452 H5 6JI 33 6JI H6 H6 H 0 1 N N N 31.755 32.088 44.707 -3.893 0.658 2.926 H6 6JI 34 6JI H7 H7 H 0 1 N N N 31.299 33.773 44.280 -2.225 0.049 2.801 H7 6JI 35 6JI H8 H8 H 0 1 N N N 31.335 28.723 43.859 -6.906 0.041 -0.877 H8 6JI 36 6JI H9 H9 H 0 1 N N N 30.138 35.058 44.336 -0.722 -0.207 1.810 H9 6JI 37 6JI H10 H10 H 0 1 N N N 27.794 33.530 45.482 -2.043 0.230 -0.906 H10 6JI 38 6JI H11 H11 H 0 1 N N N 28.023 34.511 47.440 -2.100 2.625 -0.153 H11 6JI 39 6JI H12 H12 H 0 1 N N N 29.570 33.610 47.582 -1.079 2.174 1.234 H12 6JI 40 6JI H13 H13 H 0 1 N N N 30.831 35.518 46.810 -0.338 1.741 -1.693 H13 6JI 41 6JI H14 H14 H 0 1 N N N 29.761 36.025 48.161 0.252 3.080 -0.683 H14 6JI 42 6JI H15 H15 H 0 1 N N N 30.925 38.181 46.530 2.007 2.698 0.993 H15 6JI 43 6JI H16 H16 H 0 1 N N N 31.078 37.078 45.121 0.811 1.764 1.922 H16 6JI 44 6JI H17 H17 H 0 1 N N N 29.978 38.495 45.036 2.390 1.044 1.528 H17 6JI 45 6JI H18 H18 H 0 1 N N N 27.978 37.345 47.907 2.282 1.959 -1.727 H18 6JI 46 6JI H19 H19 H 0 1 N N N 27.969 39.950 45.261 3.918 2.348 0.332 H19 6JI 47 6JI H20 H20 H 0 1 N N N 28.619 42.277 45.698 6.003 1.451 1.278 H20 6JI 48 6JI H21 H21 H 0 1 N N N 29.178 38.869 49.216 3.141 -1.437 -1.455 H21 6JI 49 6JI H22 H22 H 0 1 N N N 26.491 38.589 45.764 0.762 0.450 -2.848 H22 6JI 50 6JI H23 H23 H 0 1 N N N 26.070 37.184 46.801 2.267 -0.517 -2.781 H23 6JI 51 6JI H24 H24 H 0 1 N N N 26.318 36.027 44.622 0.082 -1.740 -1.705 H24 6JI 52 6JI H25 H25 H 0 1 N N N 29.130 28.737 44.634 -5.140 -0.672 -2.319 H25 6JI 53 6JI H26 H26 H 0 1 N N N 27.766 30.587 44.371 -4.316 -2.411 -0.757 H26 6JI 54 6JI H27 H27 H 0 1 N N N 28.514 30.340 42.757 -3.007 -1.299 -1.223 H27 6JI 55 6JI H28 H28 H 0 1 N N N 30.000 32.175 43.079 -4.653 -1.134 1.342 H28 6JI 56 6JI H29 H29 H 0 1 N N N 27.147 32.860 43.851 -2.529 -1.775 2.440 H29 6JI 57 6JI H30 H30 H 0 1 N N N 27.827 32.681 42.198 -3.057 -3.034 1.299 H30 6JI 58 6JI H31 H31 H 0 1 N N N 29.079 34.681 42.374 -1.515 -2.129 -0.418 H31 6JI 59 6JI H32 H32 H 0 1 N N N 27.468 35.067 43.069 -0.630 -2.570 1.063 H32 6JI 60 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6JI C9 C8 SING N N 1 6JI C9 C10 SING N N 2 6JI C8 C7 SING N N 3 6JI O1 C5 SING N N 4 6JI C7 C6 SING N N 5 6JI C7 C2 SING N N 6 6JI C6 C5 SING N N 7 6JI O4 C23 SING N N 8 6JI O4 C24 SING N N 9 6JI C5 C4 SING N N 10 6JI C10 C24 SING N N 11 6JI C10 C11 SING N N 12 6JI C23 C24 SING N N 13 6JI C23 C22 SING N N 14 6JI C1 C2 SING N N 15 6JI C24 C14 SING N N 16 6JI C2 C11 SING N N 17 6JI C2 C3 SING N N 18 6JI C11 C12 SING N N 19 6JI C15 C14 SING N N 20 6JI C4 C3 SING N N 21 6JI C22 C16 SING N N 22 6JI C18 C19 DOUB N N 23 6JI C18 C17 SING N N 24 6JI C14 C16 SING N N 25 6JI C14 C13 SING N N 26 6JI C19 C20 SING N N 27 6JI C16 C17 SING N N 28 6JI C12 C13 SING N N 29 6JI C17 C21 DOUB N N 30 6JI C20 O2 DOUB N N 31 6JI C20 O3 SING N N 32 6JI C21 O3 SING N N 33 6JI C4 H1 SING N N 34 6JI C4 H2 SING N N 35 6JI C3 H3 SING N N 36 6JI C3 H4 SING N N 37 6JI C1 H5 SING N N 38 6JI C1 H6 SING N N 39 6JI C1 H7 SING N N 40 6JI O1 H8 SING N N 41 6JI C10 H9 SING N N 42 6JI C11 H10 SING N N 43 6JI C12 H11 SING N N 44 6JI C12 H12 SING N N 45 6JI C13 H13 SING N N 46 6JI C13 H14 SING N N 47 6JI C15 H15 SING N N 48 6JI C15 H16 SING N N 49 6JI C15 H17 SING N N 50 6JI C16 H18 SING N N 51 6JI C18 H19 SING N N 52 6JI C19 H20 SING N N 53 6JI C21 H21 SING N N 54 6JI C22 H22 SING N N 55 6JI C22 H23 SING N N 56 6JI C23 H24 SING N N 57 6JI C5 H25 SING N N 58 6JI C6 H26 SING N N 59 6JI C6 H27 SING N N 60 6JI C7 H28 SING N N 61 6JI C8 H29 SING N N 62 6JI C8 H30 SING N N 63 6JI C9 H31 SING N N 64 6JI C9 H32 SING N N 65 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6JI InChI InChI 1.03 "InChI=1S/C24H32O4/c1-22-9-7-16(25)11-15(22)4-5-18-17(22)8-10-23(2)19(12-20-24(18,23)28-20)14-3-6-21(26)27-13-14/h3,6,13,15-20,25H,4-5,7-12H2,1-2H3/t15-,16+,17+,18-,19-,20-,22+,23-,24-/m1/s1" 6JI InChIKey InChI 1.03 ATLJNLYIJOCWJE-CWMZOUAVSA-N 6JI SMILES_CANONICAL CACTVS 3.385 "C[C@]12CC[C@H](O)C[C@H]1CC[C@@H]3[C@@H]2CC[C@]4(C)[C@H](C[C@H]5O[C@@]345)C6=COC(=O)C=C6" 6JI SMILES CACTVS 3.385 "C[C]12CC[CH](O)C[CH]1CC[CH]3[CH]2CC[C]4(C)[CH](C[CH]5O[C]345)C6=COC(=O)C=C6" 6JI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@]12CC[C@@H](C[C@H]1CC[C@@H]3[C@@H]2CC[C@]4([C@]35[C@H](O5)C[C@@H]4C6=COC(=O)C=C6)C)O" 6JI SMILES "OpenEye OEToolkits" 2.0.7 "CC12CCC(CC1CCC3C2CCC4(C35C(O5)CC4C6=COC(=O)C=C6)C)O" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 6JI _pdbx_chem_comp_synonyms.name Resibufogenin _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6JI "Create component" 2022-02-15 PDBJ 6JI "Initial release" 2022-03-02 RCSB ##