data_6K6 # _chem_comp.id 6K6 _chem_comp.name ;N-(furan-2-ylmethyl)adenosine 5'-(dihydrogen phosphate) ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H18 N5 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-06-10 _chem_comp.pdbx_modified_date 2014-01-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 427.306 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6K6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4KXN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6K6 C66 C66 C 0 1 Y N N 4.301 -7.615 44.833 7.475 -1.095 -1.310 C66 6K6 1 6K6 C65 C65 C 0 1 Y N N 5.340 -7.677 45.668 8.239 -2.285 -1.320 C65 6K6 2 6K6 C64 C64 C 0 1 Y N N 6.470 -7.628 44.965 8.103 -2.846 -0.105 C64 6K6 3 6K6 O63 O63 O 0 1 Y N N 6.134 -7.540 43.640 7.301 -2.063 0.636 O63 6K6 4 6K6 C62 C62 C 0 1 Y N N 4.772 -7.535 43.594 6.922 -0.998 -0.088 C62 6K6 5 6K6 C61 C61 C 0 1 N N N 4.003 -7.431 42.280 6.021 0.114 0.386 C61 6K6 6 6K6 N6 N6 N 0 1 N N N 3.939 -5.998 41.948 4.628 -0.226 0.086 N6 6K6 7 6K6 C6 C6 C 0 1 Y N N 4.789 -5.434 41.101 3.613 0.650 0.431 C6 6K6 8 6K6 N1 N1 N 0 1 Y N N 5.845 -6.117 40.601 3.885 1.803 1.034 N1 6K6 9 6K6 C2 C2 C 0 1 Y N N 6.694 -5.567 39.747 2.923 2.644 1.367 C2 6K6 10 6K6 N3 N3 N 0 1 Y N N 6.545 -4.317 39.351 1.653 2.397 1.126 N3 6K6 11 6K6 C4 C4 C 0 1 Y N N 5.519 -3.573 39.811 1.285 1.269 0.526 C4 6K6 12 6K6 C5 C5 C 0 1 Y N N 4.603 -4.121 40.701 2.271 0.343 0.147 C5 6K6 13 6K6 N7 N7 N 0 1 Y N N 3.707 -3.184 40.989 1.635 -0.702 -0.435 N7 6K6 14 6K6 C8 C8 C 0 1 Y N N 4.035 -2.085 40.304 0.353 -0.482 -0.436 C8 6K6 15 6K6 N9 N9 N 0 1 Y N N 5.141 -2.316 39.575 0.086 0.723 0.142 N9 6K6 16 6K6 "C1'" "C1'" C 0 1 N N R 5.843 -1.361 38.664 -1.238 1.324 0.322 "C1'" 6K6 17 6K6 "O4'" "O4'" O 0 1 N N N 5.048 -0.144 38.588 -2.261 0.306 0.287 "O4'" 6K6 18 6K6 "C2'" "C2'" C 0 1 N N R 6.025 -1.854 37.207 -1.569 2.260 -0.861 "C2'" 6K6 19 6K6 "O2'" "O2'" O 0 1 N N N 7.411 -1.797 36.847 -1.300 3.620 -0.514 "O2'" 6K6 20 6K6 "C3'" "C3'" C 0 1 N N S 5.257 -0.855 36.357 -3.081 2.048 -1.097 "C3'" 6K6 21 6K6 "O3'" "O3'" O 0 1 N N N 6.020 -0.477 35.205 -3.795 3.270 -0.902 "O3'" 6K6 22 6K6 "C4'" "C4'" C 0 1 N N R 5.141 0.358 37.269 -3.485 1.007 -0.026 "C4'" 6K6 23 6K6 "C5'" "C5'" C 0 1 N N N 3.808 0.902 36.830 -4.525 0.037 -0.591 "C5'" 6K6 24 6K6 "O5'" "O5'" O 0 1 N N N 3.216 1.874 37.705 -4.970 -0.841 0.445 "O5'" 6K6 25 6K6 PA PA P 0 1 N N N 1.579 1.709 37.627 -6.068 -1.994 0.206 PA 6K6 26 6K6 O2 O2 O 0 1 N N N 0.857 1.348 38.980 -6.422 -2.698 1.610 O2 6K6 27 6K6 O3 O3 O 0 1 N N N 0.805 2.534 36.441 -7.293 -1.396 -0.370 O3 6K6 28 6K6 O1 O1 O 0 1 N N N 1.546 3.065 38.223 -5.478 -3.093 -0.812 O1 6K6 29 6K6 H1 H1 H 0 1 N N N 3.259 -7.628 45.116 7.361 -0.396 -2.126 H1 6K6 30 6K6 H2 H2 H 0 1 N N N 5.275 -7.755 46.743 8.820 -2.670 -2.146 H2 6K6 31 6K6 H3 H3 H 0 1 N N N 7.472 -7.653 45.368 8.560 -3.769 0.219 H3 6K6 32 6K6 H4 H4 H 0 1 N N N 2.989 -7.839 42.399 6.140 0.244 1.461 H4 6K6 33 6K6 H5 H5 H 0 1 N N N 4.529 -7.982 41.487 6.287 1.039 -0.124 H5 6K6 34 6K6 H6 H6 H 0 1 N N N 4.038 -5.506 42.813 4.417 -1.064 -0.353 H6 6K6 35 6K6 H7 H7 H 0 1 N N N 7.521 -6.150 39.369 3.189 3.570 1.856 H7 6K6 36 6K6 H8 H8 H 0 1 N N N 3.493 -1.151 40.332 -0.391 -1.155 -0.839 H8 6K6 37 6K6 H9 H9 H 0 1 N N N 6.835 -1.130 39.079 -1.280 1.873 1.263 H9 6K6 38 6K6 H10 H10 H 0 1 N N N 5.609 -2.866 37.091 -1.000 1.974 -1.746 H10 6K6 39 6K6 H11 H11 H 0 1 N N N 7.901 -2.418 37.373 -1.490 4.252 -1.221 H11 6K6 40 6K6 H12 H12 H 0 1 N N N 4.263 -1.245 36.091 -3.260 1.656 -2.098 H12 6K6 41 6K6 H13 H13 H 0 1 N N N 5.525 0.147 34.687 -3.537 3.977 -1.508 H13 6K6 42 6K6 H14 H14 H 0 1 N N N 5.961 1.075 37.117 -3.873 1.507 0.861 H14 6K6 43 6K6 H15 H15 H 0 1 N N N 3.942 1.371 35.844 -5.373 0.600 -0.979 H15 6K6 44 6K6 H16 H16 H 0 1 N N N 3.110 0.056 36.742 -4.078 -0.547 -1.395 H16 6K6 45 6K6 H17 H17 H 0 1 N N N -0.034 1.678 38.962 -7.078 -3.404 1.541 H17 6K6 46 6K6 H18 H18 H 0 1 N N N 1.113 3.663 37.626 -4.673 -3.527 -0.500 H18 6K6 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6K6 "O3'" "C3'" SING N N 1 6K6 "C3'" "C2'" SING N N 2 6K6 "C3'" "C4'" SING N N 3 6K6 O3 PA DOUB N N 4 6K6 "C5'" "C4'" SING N N 5 6K6 "C5'" "O5'" SING N N 6 6K6 "O2'" "C2'" SING N N 7 6K6 "C2'" "C1'" SING N N 8 6K6 "C4'" "O4'" SING N N 9 6K6 PA "O5'" SING N N 10 6K6 PA O1 SING N N 11 6K6 PA O2 SING N N 12 6K6 "O4'" "C1'" SING N N 13 6K6 "C1'" N9 SING N N 14 6K6 N3 C2 DOUB Y N 15 6K6 N3 C4 SING Y N 16 6K6 N9 C4 SING Y N 17 6K6 N9 C8 SING Y N 18 6K6 C2 N1 SING Y N 19 6K6 C4 C5 DOUB Y N 20 6K6 C8 N7 DOUB Y N 21 6K6 N1 C6 DOUB Y N 22 6K6 C5 N7 SING Y N 23 6K6 C5 C6 SING Y N 24 6K6 C6 N6 SING N N 25 6K6 N6 C61 SING N N 26 6K6 C61 C62 SING N N 27 6K6 C62 O63 SING Y N 28 6K6 C62 C66 DOUB Y N 29 6K6 O63 C64 SING Y N 30 6K6 C66 C65 SING Y N 31 6K6 C64 C65 DOUB Y N 32 6K6 C66 H1 SING N N 33 6K6 C65 H2 SING N N 34 6K6 C64 H3 SING N N 35 6K6 C61 H4 SING N N 36 6K6 C61 H5 SING N N 37 6K6 N6 H6 SING N N 38 6K6 C2 H7 SING N N 39 6K6 C8 H8 SING N N 40 6K6 "C1'" H9 SING N N 41 6K6 "C2'" H10 SING N N 42 6K6 "O2'" H11 SING N N 43 6K6 "C3'" H12 SING N N 44 6K6 "O3'" H13 SING N N 45 6K6 "C4'" H14 SING N N 46 6K6 "C5'" H15 SING N N 47 6K6 "C5'" H16 SING N N 48 6K6 O2 H17 SING N N 49 6K6 O1 H18 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6K6 SMILES ACDLabs 12.01 "O=P(O)(O)OCC4OC(n2cnc1c(ncnc12)NCc3occc3)C(O)C4O" 6K6 InChI InChI 1.03 "InChI=1S/C15H18N5O8P/c21-11-9(5-27-29(23,24)25)28-15(12(11)22)20-7-19-10-13(17-6-18-14(10)20)16-4-8-2-1-3-26-8/h1-3,6-7,9,11-12,15,21-22H,4-5H2,(H,16,17,18)(H2,23,24,25)/t9-,11-,12-,15-/m1/s1" 6K6 InChIKey InChI 1.03 WDFCXEWULSQTFC-SDBHATRESA-N 6K6 SMILES_CANONICAL CACTVS 3.370 "O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3c(NCc4occc4)ncnc23" 6K6 SMILES CACTVS 3.370 "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3c(NCc4occc4)ncnc23" 6K6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(oc1)CNc2c3c(ncn2)n(cn3)[C@H]4[C@@H]([C@@H]([C@H](O4)COP(=O)(O)O)O)O" 6K6 SMILES "OpenEye OEToolkits" 1.7.6 "c1cc(oc1)CNc2c3c(ncn2)n(cn3)C4C(C(C(O4)COP(=O)(O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6K6 "SYSTEMATIC NAME" ACDLabs 12.01 ;N-(furan-2-ylmethyl)adenosine 5'-(dihydrogen phosphate) ; 6K6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R)-5-[6-(furan-2-ylmethylamino)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6K6 "Create component" 2013-06-10 RCSB 6K6 "Initial release" 2014-02-05 RCSB #