data_6LG # _chem_comp.id 6LG _chem_comp.name "(1R)-1-{3-[3-(dimethylcarbamoyl)phenoxy]-4-nitrophenyl}ethyl bis[(aziridin-1-yl)]phosphinate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H25 N4 O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-05-12 _chem_comp.pdbx_modified_date 2017-04-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 460.420 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6LG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5JM5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6LG C10 C1 C 0 1 Y N N 20.965 -0.243 35.639 0.829 -1.753 0.259 C10 6LG 1 6LG C13 C2 C 0 1 N N R 17.370 0.802 36.336 -1.880 0.519 -1.076 C13 6LG 2 6LG C17 C3 C 0 1 N N N 15.961 -3.349 37.667 -5.991 -0.174 -1.131 C17 6LG 3 6LG C20 C4 C 0 1 N N N 17.229 -3.058 33.077 -2.477 0.854 2.091 C20 6LG 4 6LG C21 C5 C 0 1 N N N 18.339 -2.946 33.995 -3.543 1.838 2.576 C21 6LG 5 6LG C24 C6 C 0 1 Y N N 19.632 1.702 37.164 -1.591 -1.967 -1.063 C24 6LG 6 6LG C26 C7 C 0 1 Y N N 21.702 0.662 36.405 0.332 -3.002 -0.082 C26 6LG 7 6LG O01 O1 O 0 1 N N N 22.521 -6.915 34.227 5.985 2.630 0.244 O01 6LG 8 6LG C02 C8 C 0 1 N N N 21.752 -6.066 33.811 5.146 1.901 -0.249 C02 6LG 9 6LG N03 N1 N 0 1 N N N 21.232 -6.164 32.465 5.218 1.578 -1.555 N03 6LG 10 6LG C04 C9 C 0 1 N N N 20.316 -5.200 31.922 6.373 1.999 -2.351 C04 6LG 11 6LG C05 C10 C 0 1 N N N 21.616 -7.256 31.603 4.140 0.806 -2.179 C05 6LG 12 6LG C06 C11 C 0 1 Y N N 21.369 -4.925 34.754 4.047 1.369 0.586 C06 6LG 13 6LG C07 C12 C 0 1 Y N N 21.646 -3.607 34.400 3.543 0.090 0.347 C07 6LG 14 6LG C08 C13 C 0 1 Y N N 21.306 -2.557 35.250 2.514 -0.402 1.133 C08 6LG 15 6LG O09 O2 O 0 1 N N N 21.609 -1.228 34.848 2.021 -1.647 0.904 O09 6LG 16 6LG C11 C14 C 0 1 Y N N 19.572 -0.159 35.623 0.110 -0.611 -0.064 C11 6LG 17 6LG C12 C15 C 0 1 Y N N 18.895 0.798 36.386 -1.098 -0.721 -0.724 C12 6LG 18 6LG O14 O3 O 0 1 N N N 16.986 -0.071 35.302 -3.272 0.283 -0.857 O14 6LG 19 6LG P15 P1 P 0 1 N N N 16.125 -1.429 35.351 -4.167 1.176 0.140 P15 6LG 20 6LG N16 N2 N 0 1 N N N 15.758 -2.183 36.800 -5.795 0.973 -0.234 N16 6LG 21 6LG C18 C16 C 0 1 N N N 14.649 -2.751 37.565 -6.050 1.262 -1.658 C18 6LG 22 6LG N19 N3 N 0 1 N N N 17.018 -2.470 34.394 -3.891 0.691 1.728 N19 6LG 23 6LG O22 O4 O 0 1 N N N 14.828 -1.151 34.691 -3.799 2.602 -0.010 O22 6LG 24 6LG C23 C17 C 0 1 N N N 16.843 2.159 35.958 -1.647 0.869 -2.547 C23 6LG 25 6LG C25 C18 C 0 1 Y N N 21.030 1.627 37.165 -0.880 -3.107 -0.737 C25 6LG 26 6LG N27 N4 N 1 1 N N N 23.132 0.592 36.439 1.099 -4.222 0.255 N27 6LG 27 6LG O28 O5 O 0 1 N N N 23.770 -0.587 36.111 2.168 -4.130 0.833 O28 6LG 28 6LG O29 O6 O -1 1 N N N 23.768 1.580 36.797 0.662 -5.319 -0.044 O29 6LG 29 6LG C30 C19 C 0 1 Y N N 20.678 -2.847 36.467 1.987 0.377 2.154 C30 6LG 30 6LG C31 C20 C 0 1 Y N N 20.399 -4.162 36.820 2.485 1.645 2.391 C31 6LG 31 6LG C32 C21 C 0 1 Y N N 20.739 -5.202 35.964 3.514 2.142 1.618 C32 6LG 32 6LG H131 H1 H 0 0 N N N 16.960 0.490 37.308 -1.548 1.347 -0.449 H131 6LG 33 6LG H172 H2 H 0 0 N N N 16.150 -4.337 37.223 -5.116 -0.771 -1.387 H172 6LG 34 6LG H171 H3 H 0 0 N N N 16.540 -3.248 38.597 -6.930 -0.722 -1.052 H171 6LG 35 6LG H202 H4 H 0 0 N N N 17.192 -2.423 32.180 -1.792 1.193 1.314 H202 6LG 36 6LG H201 H5 H 0 0 N N N 16.807 -4.047 32.843 -2.059 0.160 2.820 H201 6LG 37 6LG H211 H6 H 0 0 N N N 18.761 -3.849 34.460 -3.829 1.795 3.627 H211 6LG 38 6LG H212 H7 H 0 0 N N N 19.146 -2.225 33.796 -3.562 2.828 2.121 H212 6LG 39 6LG H241 H8 H 0 0 N N N 19.126 2.449 37.757 -2.539 -2.051 -1.575 H241 6LG 40 6LG H041 H9 H 0 0 N N N 20.107 -4.427 32.676 7.145 1.231 -2.307 H041 6LG 41 6LG H043 H10 H 0 0 N N N 20.761 -4.733 31.031 6.066 2.146 -3.387 H043 6LG 42 6LG H042 H11 H 0 0 N N N 19.378 -5.702 31.643 6.768 2.934 -1.953 H042 6LG 43 6LG H053 H12 H 0 0 N N N 22.315 -7.917 32.137 3.342 0.645 -1.454 H053 6LG 44 6LG H051 H13 H 0 0 N N N 20.721 -7.827 31.313 3.748 1.356 -3.035 H051 6LG 45 6LG H052 H14 H 0 0 N N N 22.104 -6.857 30.702 4.529 -0.156 -2.512 H052 6LG 46 6LG H071 H15 H 0 0 N N N 22.129 -3.397 33.457 3.954 -0.514 -0.448 H071 6LG 47 6LG H111 H16 H 0 0 N N N 19.006 -0.845 35.010 0.495 0.363 0.201 H111 6LG 48 6LG H182 H17 H 0 0 N N N 14.231 -2.197 38.418 -5.213 1.615 -2.260 H182 6LG 49 6LG H181 H18 H 0 0 N N N 13.841 -3.286 37.045 -7.028 1.663 -1.925 H181 6LG 50 6LG H231 H19 H 0 0 N N N 17.115 2.888 36.735 -0.577 0.962 -2.733 H231 6LG 51 6LG H232 H20 H 0 0 N N N 17.281 2.467 34.997 -2.058 0.080 -3.177 H232 6LG 52 6LG H233 H21 H 0 0 N N N 15.748 2.114 35.865 -2.140 1.813 -2.778 H233 6LG 53 6LG H251 H22 H 0 0 N N N 21.599 2.325 37.761 -1.267 -4.079 -1.003 H251 6LG 54 6LG H301 H23 H 0 0 N N N 20.408 -2.043 37.136 1.184 -0.009 2.765 H301 6LG 55 6LG H311 H24 H 0 0 N N N 19.917 -4.376 37.762 2.070 2.246 3.187 H311 6LG 56 6LG H321 H25 H 0 0 N N N 20.515 -6.223 36.237 3.903 3.132 1.809 H321 6LG 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6LG C05 N03 SING N N 1 6LG C04 N03 SING N N 2 6LG N03 C02 SING N N 3 6LG C20 C21 SING N N 4 6LG C20 N19 SING N N 5 6LG C02 O01 DOUB N N 6 6LG C02 C06 SING N N 7 6LG C21 N19 SING N N 8 6LG N19 P15 SING N N 9 6LG C07 C06 DOUB Y N 10 6LG C07 C08 SING Y N 11 6LG O22 P15 DOUB N N 12 6LG C06 C32 SING Y N 13 6LG O09 C08 SING N N 14 6LG O09 C10 SING N N 15 6LG C08 C30 DOUB Y N 16 6LG O14 P15 SING N N 17 6LG O14 C13 SING N N 18 6LG P15 N16 SING N N 19 6LG C11 C10 DOUB Y N 20 6LG C11 C12 SING Y N 21 6LG C10 C26 SING Y N 22 6LG C23 C13 SING N N 23 6LG C32 C31 DOUB Y N 24 6LG O28 N27 DOUB N N 25 6LG C13 C12 SING N N 26 6LG C12 C24 DOUB Y N 27 6LG C26 N27 SING N N 28 6LG C26 C25 DOUB Y N 29 6LG N27 O29 SING N N 30 6LG C30 C31 SING Y N 31 6LG N16 C18 SING N N 32 6LG N16 C17 SING N N 33 6LG C24 C25 SING Y N 34 6LG C18 C17 SING N N 35 6LG C13 H131 SING N N 36 6LG C17 H172 SING N N 37 6LG C17 H171 SING N N 38 6LG C20 H202 SING N N 39 6LG C20 H201 SING N N 40 6LG C21 H211 SING N N 41 6LG C21 H212 SING N N 42 6LG C24 H241 SING N N 43 6LG C04 H041 SING N N 44 6LG C04 H043 SING N N 45 6LG C04 H042 SING N N 46 6LG C05 H053 SING N N 47 6LG C05 H051 SING N N 48 6LG C05 H052 SING N N 49 6LG C07 H071 SING N N 50 6LG C11 H111 SING N N 51 6LG C18 H182 SING N N 52 6LG C18 H181 SING N N 53 6LG C23 H231 SING N N 54 6LG C23 H232 SING N N 55 6LG C23 H233 SING N N 56 6LG C25 H251 SING N N 57 6LG C30 H301 SING N N 58 6LG C31 H311 SING N N 59 6LG C32 H321 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6LG SMILES ACDLabs 12.01 "c3(c([N+]([O-])=O)ccc(C(OP(N1CC1)(N2CC2)=O)C)c3)Oc4cc(C(=O)N(C)C)ccc4" 6LG InChI InChI 1.03 "InChI=1S/C21H25N4O6P/c1-15(31-32(29,23-9-10-23)24-11-12-24)16-7-8-19(25(27)28)20(14-16)30-18-6-4-5-17(13-18)21(26)22(2)3/h4-8,13-15H,9-12H2,1-3H3/t15-/m1/s1" 6LG InChIKey InChI 1.03 NWGZZGNICQFUHV-OAHLLOKOSA-N 6LG SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O[P](=O)(N1CC1)N2CC2)c3ccc(c(Oc4cccc(c4)C(=O)N(C)C)c3)[N+]([O-])=O" 6LG SMILES CACTVS 3.385 "C[CH](O[P](=O)(N1CC1)N2CC2)c3ccc(c(Oc4cccc(c4)C(=O)N(C)C)c3)[N+]([O-])=O" 6LG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "C[C@H](c1ccc(c(c1)Oc2cccc(c2)C(=O)N(C)C)[N+](=O)[O-])OP(=O)(N3CC3)N4CC4" 6LG SMILES "OpenEye OEToolkits" 2.0.4 "CC(c1ccc(c(c1)Oc2cccc(c2)C(=O)N(C)C)[N+](=O)[O-])OP(=O)(N3CC3)N4CC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6LG "SYSTEMATIC NAME" ACDLabs 12.01 "(1R)-1-{3-[3-(dimethylcarbamoyl)phenoxy]-4-nitrophenyl}ethyl bis[(aziridin-1-yl)]phosphinate" 6LG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "3-[5-[(1~{R})-1-[bis(aziridin-1-yl)phosphoryloxy]ethyl]-2-nitro-phenoxy]-~{N},~{N}-dimethyl-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6LG "Create component" 2016-05-12 RCSB 6LG "Initial release" 2017-05-03 RCSB #