data_6LI # _chem_comp.id 6LI _chem_comp.name ;7-[2-(4-chlorophenoxy)ethyl]guanosine 5'-(dihydrogen phosphate) ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H22 Cl N5 O9 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2012-02-22 _chem_comp.pdbx_modified_date 2012-04-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 518.822 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6LI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4DT6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6LI C1 C1 C 0 1 N N R 2.232 -0.733 -24.582 2.630 -1.370 0.348 C1 6LI 1 6LI N1 N1 N 0 1 Y N N 1.254 0.413 -24.498 1.264 -1.714 -0.055 N1 6LI 2 6LI O1 O1 O 0 1 N N N 3.482 -0.384 -23.886 2.830 0.058 0.280 O1 6LI 3 6LI P1 P1 P 0 1 N N N 5.869 3.029 -23.954 4.365 4.204 0.248 P1 6LI 4 6LI CL1 CL1 CL 0 0 N N N 0.333 4.903 -15.923 -8.054 3.119 1.268 CL1 6LI 5 6LI C2 C2 C 0 1 N N R 4.569 -0.529 -24.849 4.260 0.239 0.201 C2 6LI 6 6LI N2 N2 N 1 1 Y N N 0.400 2.372 -24.194 -0.698 -1.570 -0.996 N2 6LI 7 6LI O2 O2 O 0 1 N N N 2.999 -2.321 -26.269 4.196 -3.181 -0.149 O2 6LI 8 6LI C3 C3 C 0 1 N N S 3.868 -0.084 -26.139 4.747 -0.876 -0.751 C3 6LI 9 6LI N3 N3 N 0 1 N N N -2.732 0.682 -25.293 -1.249 -4.840 0.642 N3 6LI 10 6LI O3 O3 O 0 1 N N N 4.672 -0.440 -27.275 6.004 -1.395 -0.312 O3 6LI 11 6LI C4 C4 C 0 1 N N R 2.635 -0.944 -26.050 3.650 -1.959 -0.651 C4 6LI 12 6LI N4 N4 N 0 1 N N N -0.764 -0.737 -25.212 0.866 -3.918 1.041 N4 6LI 13 6LI O4 O4 O 0 1 N N N 5.063 1.655 -24.267 4.172 2.631 0.535 O4 6LI 14 6LI C5 C5 C 0 1 N N N 5.683 0.421 -24.460 4.592 1.616 -0.379 C5 6LI 15 6LI N5 N5 N 0 1 N N N -2.817 -1.611 -25.879 0.329 -5.963 1.987 N5 6LI 16 6LI O5 O5 O 0 1 N N N -2.436 2.884 -24.691 -2.715 -3.741 -0.640 O5 6LI 17 6LI C6 C6 C 0 1 Y N N -0.578 1.578 -24.633 -0.677 -2.742 -0.316 C6 6LI 18 6LI O6 O6 O 0 1 N N N 0.974 4.033 -21.667 -3.902 0.163 -1.628 O6 6LI 19 6LI C7 C7 C 0 1 Y N N -0.028 0.315 -24.806 0.577 -2.845 0.296 C7 6LI 20 6LI O7 O7 O 0 1 N N N 7.222 2.936 -24.622 3.743 4.548 -1.050 O7 6LI 21 6LI C8 C8 C 0 1 Y N N 1.528 1.675 -24.135 0.442 -0.963 -0.843 C8 6LI 22 6LI O8 O8 O 0 1 N N N 5.797 3.209 -22.335 3.663 5.053 1.422 O8 6LI 23 6LI C9 C9 C 0 1 N N N -2.093 -0.570 -25.462 -0.011 -4.883 1.211 C9 6LI 24 6LI O9 O9 O 0 1 N N N 4.880 4.229 -24.481 5.936 4.551 0.199 O9 6LI 25 6LI C10 C10 C 0 1 N N N -1.941 1.769 -24.867 -1.610 -3.789 -0.126 C10 6LI 26 6LI C11 C11 C 0 1 N N N 0.307 3.831 -23.917 -1.828 -1.067 -1.782 C11 6LI 27 6LI C12 C12 C 0 1 N N N -0.171 4.170 -22.524 -2.801 -0.328 -0.862 C12 6LI 28 6LI C13 C13 C 0 1 Y N N 0.748 4.266 -20.332 -4.865 0.848 -0.957 C13 6LI 29 6LI C14 C14 C 0 1 Y N N -0.453 4.786 -19.836 -5.962 1.353 -1.639 C14 6LI 30 6LI C15 C15 C 0 1 Y N N -0.600 4.983 -18.472 -6.940 2.049 -0.955 C15 6LI 31 6LI C16 C16 C 0 1 Y N N 0.451 4.649 -17.623 -6.825 2.243 0.410 C16 6LI 32 6LI C17 C17 C 0 1 Y N N 1.637 4.159 -18.104 -5.731 1.741 1.093 C17 6LI 33 6LI C18 C18 C 0 1 Y N N 1.780 3.961 -19.451 -4.754 1.040 0.413 C18 6LI 34 6LI H1 H1 H 0 1 N N N 1.790 -1.653 -24.171 2.831 -1.734 1.356 H1 6LI 35 6LI H2 H2 H 0 1 N N N 4.928 -1.566 -24.926 4.713 0.122 1.186 H2 6LI 36 6LI HO2 HO2 H 0 1 N N N 3.247 -2.443 -27.178 4.843 -3.594 -0.737 HO2 6LI 37 6LI H3 H3 H 0 1 N N N 3.620 0.987 -26.110 4.825 -0.501 -1.771 H3 6LI 38 6LI HN3 HN3 H 0 1 N N N -3.710 0.792 -25.470 -1.872 -5.568 0.788 HN3 6LI 39 6LI HO3 HO3 H 0 1 N N N 4.235 -0.163 -28.072 6.357 -2.099 -0.874 HO3 6LI 40 6LI H4 H4 H 0 1 N N N 1.846 -0.598 -26.734 3.182 -2.123 -1.622 H4 6LI 41 6LI H5 H5 H 0 1 N N N 6.170 0.085 -23.533 5.667 1.693 -0.539 H5 6LI 42 6LI H5A H5A H 0 1 N N N 6.431 0.487 -25.264 4.073 1.745 -1.328 H5A 6LI 43 6LI HN5 HN5 H 0 1 N N N -2.383 -2.503 -26.005 -0.308 -6.681 2.124 HN5 6LI 44 6LI HN5A HN5A H 0 0 N N N -3.793 -1.499 -26.065 1.206 -6.007 2.399 HN5A 6LI 45 6LI H8 H8 H 0 1 N N N 2.496 2.057 -23.846 0.699 -0.007 -1.275 H8 6LI 46 6LI H11 H11 H 0 1 N N N 1.305 4.272 -24.056 -1.462 -0.384 -2.548 H11 6LI 47 6LI H11A H11A H 0 0 N N N -0.394 4.275 -24.639 -2.341 -1.903 -2.257 H11A 6LI 48 6LI H12 H12 H 0 1 N N N -0.966 3.476 -22.213 -2.287 0.508 -0.387 H12 6LI 49 6LI H12A H12A H 0 0 N N N -0.551 5.202 -22.491 -3.167 -1.012 -0.096 H12A 6LI 50 6LI H14 H14 H 0 1 N N N -1.259 5.032 -20.511 -6.052 1.202 -2.705 H14 6LI 51 6LI H15 H15 H 0 1 N N N -1.518 5.390 -18.073 -7.794 2.442 -1.486 H15 6LI 52 6LI H17 H17 H 0 1 N N N 2.449 3.932 -17.429 -5.643 1.893 2.158 H17 6LI 53 6LI H18 H18 H 0 1 N N N 2.707 3.562 -19.835 -3.902 0.644 0.946 H18 6LI 54 6LI HO8 HO8 H 0 1 N N N 6.678 3.236 -21.979 3.740 6.011 1.314 HO8 6LI 55 6LI HO9 HO9 H 0 1 N N N 5.317 4.722 -25.166 6.409 4.351 1.018 HO9 6LI 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6LI C1 N1 SING N N 1 6LI C1 O1 SING N N 2 6LI C1 C4 SING N N 3 6LI N1 C7 SING Y N 4 6LI N1 C8 SING Y N 5 6LI O1 C2 SING N N 6 6LI P1 O4 SING N N 7 6LI P1 O7 DOUB N N 8 6LI P1 O8 SING N N 9 6LI P1 O9 SING N N 10 6LI CL1 C16 SING N N 11 6LI C2 C3 SING N N 12 6LI C2 C5 SING N N 13 6LI N2 C6 SING Y N 14 6LI N2 C8 DOUB Y N 15 6LI N2 C11 SING N N 16 6LI O2 C4 SING N N 17 6LI C3 O3 SING N N 18 6LI C3 C4 SING N N 19 6LI N3 C9 SING N N 20 6LI N3 C10 SING N N 21 6LI N4 C7 SING N N 22 6LI N4 C9 DOUB N N 23 6LI O4 C5 SING N N 24 6LI N5 C9 SING N N 25 6LI O5 C10 DOUB N N 26 6LI C6 C7 DOUB Y N 27 6LI C6 C10 SING N N 28 6LI O6 C12 SING N N 29 6LI O6 C13 SING N N 30 6LI C11 C12 SING N N 31 6LI C13 C14 DOUB Y N 32 6LI C13 C18 SING Y N 33 6LI C14 C15 SING Y N 34 6LI C15 C16 DOUB Y N 35 6LI C16 C17 SING Y N 36 6LI C17 C18 DOUB Y N 37 6LI C1 H1 SING N N 38 6LI C2 H2 SING N N 39 6LI O2 HO2 SING N N 40 6LI C3 H3 SING N N 41 6LI N3 HN3 SING N N 42 6LI O3 HO3 SING N N 43 6LI C4 H4 SING N N 44 6LI C5 H5 SING N N 45 6LI C5 H5A SING N N 46 6LI N5 HN5 SING N N 47 6LI N5 HN5A SING N N 48 6LI C8 H8 SING N N 49 6LI C11 H11 SING N N 50 6LI C11 H11A SING N N 51 6LI C12 H12 SING N N 52 6LI C12 H12A SING N N 53 6LI C14 H14 SING N N 54 6LI C15 H15 SING N N 55 6LI C17 H17 SING N N 56 6LI C18 H18 SING N N 57 6LI O8 HO8 SING N N 58 6LI O9 HO9 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6LI SMILES ACDLabs 12.01 "Clc4ccc(OCC[n+]2c1c(N=C(N)NC1=O)n(c2)C3OC(C(O)C3O)COP(=O)(O)O)cc4" 6LI InChI InChI 1.03 "InChI=1S/C18H21ClN5O9P/c19-9-1-3-10(4-2-9)31-6-5-23-8-24(15-12(23)16(27)22-18(20)21-15)17-14(26)13(25)11(33-17)7-32-34(28,29)30/h1-4,8,11,13-14,17,25-26H,5-7H2,(H4-,20,21,22,27,28,29,30)/p+1/t11-,13-,14-,17-/m1/s1" 6LI InChIKey InChI 1.03 QWFXGVANFMDSMH-LSCFUAHRSA-O 6LI SMILES_CANONICAL CACTVS 3.370 "NC1=Nc2n(c[n+](CCOc3ccc(Cl)cc3)c2C(=O)N1)[C@@H]4O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]4O" 6LI SMILES CACTVS 3.370 "NC1=Nc2n(c[n+](CCOc3ccc(Cl)cc3)c2C(=O)N1)[CH]4O[CH](CO[P](O)(O)=O)[CH](O)[CH]4O" 6LI SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1OCC[n+]2cn(c3c2C(=O)NC(=N3)N)[C@H]4[C@@H]([C@@H]([C@H](O4)COP(=O)(O)O)O)O)Cl" 6LI SMILES "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1OCC[n+]2cn(c3c2C(=O)NC(=N3)N)C4C(C(C(O4)COP(=O)(O)O)O)O)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6LI "SYSTEMATIC NAME" ACDLabs 12.01 ;7-[2-(4-chlorophenoxy)ethyl]guanosine 5'-(dihydrogen phosphate) ; 6LI "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3S,4R,5R)-5-[2-azanyl-7-[2-(4-chloranylphenoxy)ethyl]-6-oxidanylidene-1H-purin-7-ium-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6LI "Create component" 2012-02-22 RCSB #