data_6MG # _chem_comp.id 6MG _chem_comp.name "N~2~-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-[(2S)-2,3,3-trimethylbutyl]-L-leucinamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H38 N3 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-05-09 _chem_comp.pdbx_modified_date 2016-12-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 455.528 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6MG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5JS3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6MG C2 C1 C 0 1 N N S 10.096 38.416 -3.565 -1.879 -0.820 0.398 C2 6MG 1 6MG C3 C2 C 0 1 N N N 8.927 39.341 -3.868 -3.041 0.068 0.762 C3 6MG 2 6MG C7 C3 C 0 1 N N N 6.724 43.557 -3.636 -7.425 1.930 -0.490 C7 6MG 3 6MG C8 C4 C 0 1 N N N 7.541 44.723 -4.159 -8.447 1.924 -1.629 C8 6MG 4 6MG C12 C5 C 0 1 N N N 5.937 44.115 -2.473 -6.895 3.351 -0.287 C12 6MG 5 6MG C16 C6 C 0 1 N N N 5.753 43.081 -4.789 -8.094 1.447 0.798 C16 6MG 6 6MG C20 C7 C 0 1 N N N 8.672 42.789 -2.170 -6.795 -0.423 -1.045 C20 6MG 7 6MG O28 O1 O 0 1 N N N 7.764 38.938 -3.892 -3.045 0.658 1.821 O28 6MG 8 6MG C30 C8 C 0 1 N N N 9.280 37.917 -1.184 -3.326 -2.477 -0.786 C30 6MG 9 6MG C31 C9 C 0 1 N N N 9.129 36.399 -1.303 -2.595 -2.295 -2.118 C31 6MG 10 6MG C35 C10 C 0 1 N N N 9.523 38.322 0.281 -3.915 -3.887 -0.716 C35 6MG 11 6MG N1 N1 N 0 1 N N N 11.302 38.779 -4.303 -0.813 -0.665 1.398 N1 6MG 12 6MG N4 N2 N 0 1 N N N 9.268 40.657 -4.065 -4.076 0.205 -0.091 N4 6MG 13 6MG C5 C11 C 0 1 N N N 8.272 41.678 -4.386 -5.242 1.003 0.296 C5 6MG 14 6MG C6 C12 C 0 1 N N S 7.642 42.361 -3.167 -6.264 0.998 -0.842 C6 6MG 15 6MG C29 C13 C 0 1 N N N 10.417 38.453 -2.077 -2.341 -2.278 0.368 C29 6MG 16 6MG P44 P1 P 0 1 N N N 11.514 38.490 -5.917 0.706 -0.806 0.686 P44 6MG 17 6MG O45 O2 O 0 1 N N N 10.168 38.072 -6.505 0.912 0.311 -0.262 O45 6MG 18 6MG C46 C14 C 0 1 N N N 11.982 40.115 -6.585 1.990 -0.750 1.979 C46 6MG 19 6MG C50 C15 C 0 1 N N N 13.648 41.614 -10.834 5.943 1.354 0.196 C50 6MG 20 6MG C51 C16 C 0 1 Y N N 15.005 41.197 -11.402 7.274 1.032 -0.433 C51 6MG 21 6MG C52 C17 C 0 1 Y N N 15.106 40.687 -12.694 8.389 0.849 0.364 C52 6MG 22 6MG C54 C18 C 0 1 Y N N 16.359 40.336 -13.211 9.610 0.554 -0.213 C54 6MG 23 6MG C56 C19 C 0 1 Y N N 17.524 40.458 -12.444 9.716 0.442 -1.586 C56 6MG 24 6MG C58 C20 C 0 1 Y N N 17.424 41.002 -11.157 8.601 0.624 -2.383 C58 6MG 25 6MG C60 C21 C 0 1 Y N N 16.184 41.364 -10.641 7.379 0.914 -1.806 C60 6MG 26 6MG O68 O3 O 0 1 N N N 12.593 37.493 -6.182 0.800 -2.205 -0.104 O68 6MG 27 6MG N47 N3 N 0 1 N N N 12.007 40.028 -8.029 3.312 -0.873 1.360 N47 6MG 28 6MG C48 C22 C 0 1 N N N 12.975 40.779 -8.747 4.021 0.233 1.060 C48 6MG 29 6MG O49 O4 O 0 1 N N N 12.843 40.641 -10.158 5.236 0.120 0.491 O49 6MG 30 6MG O64 O5 O 0 1 N N N 13.710 41.630 -8.203 3.564 1.332 1.304 O64 6MG 31 6MG H1 H1 H 0 1 N N N 9.804 37.389 -3.831 -1.500 -0.538 -0.584 H1 6MG 32 6MG H2 H2 H 0 1 N N N 8.226 45.073 -3.373 -8.825 0.912 -1.773 H2 6MG 33 6MG H3 H3 H 0 1 N N N 8.123 44.399 -5.035 -9.274 2.589 -1.378 H3 6MG 34 6MG H4 H4 H 0 1 N N N 6.867 45.542 -4.449 -7.970 2.269 -2.547 H4 6MG 35 6MG H5 H5 H 0 1 N N N 6.630 44.440 -1.683 -6.418 3.695 -1.205 H5 6MG 36 6MG H6 H6 H 0 1 N N N 5.340 44.974 -2.813 -7.722 4.015 -0.037 H6 6MG 37 6MG H7 H7 H 0 1 N N N 5.268 43.337 -2.076 -6.167 3.354 0.524 H7 6MG 38 6MG H8 H8 H 0 1 N N N 5.148 42.234 -4.433 -7.366 1.450 1.609 H8 6MG 39 6MG H9 H9 H 0 1 N N N 5.090 43.910 -5.075 -8.922 2.111 1.049 H9 6MG 40 6MG H10 H10 H 0 1 N N N 6.346 42.768 -5.661 -8.472 0.434 0.654 H10 6MG 41 6MG H11 H11 H 0 1 N N N 8.177 43.273 -1.315 -7.523 -0.427 -1.856 H11 6MG 42 6MG H12 H12 H 0 1 N N N 9.231 41.909 -1.820 -5.968 -1.087 -1.296 H12 6MG 43 6MG H13 H13 H 0 1 N N N 9.366 43.500 -2.642 -7.271 -0.767 -0.127 H13 6MG 44 6MG H14 H14 H 0 1 N N N 8.340 38.382 -1.515 -4.128 -1.743 -0.709 H14 6MG 45 6MG H15 H15 H 0 1 N N N 8.310 36.059 -0.652 -1.846 -3.078 -2.231 H15 6MG 46 6MG H16 H16 H 0 1 N N N 8.902 36.134 -2.346 -3.312 -2.356 -2.937 H16 6MG 47 6MG H17 H17 H 0 1 N N N 10.067 35.912 -0.997 -2.107 -1.320 -2.134 H17 6MG 48 6MG H18 H18 H 0 1 N N N 8.707 37.935 0.909 -3.113 -4.621 -0.793 H18 6MG 49 6MG H19 H19 H 0 1 N N N 10.480 37.902 0.624 -4.436 -4.017 0.233 H19 6MG 50 6MG H20 H20 H 0 1 N N N 9.556 39.419 0.357 -4.617 -4.029 -1.538 H20 6MG 51 6MG H21 H21 H 0 1 N N N 12.055 38.310 -3.841 -0.923 -1.328 2.150 H21 6MG 52 6MG H22 H22 H 0 1 N N N 10.228 40.925 -3.986 -4.048 -0.223 -0.960 H22 6MG 53 6MG H23 H23 H 0 1 N N N 8.758 42.451 -4.999 -5.694 0.576 1.192 H23 6MG 54 6MG H24 H24 H 0 1 N N N 7.468 41.202 -4.966 -4.931 2.027 0.500 H24 6MG 55 6MG H25 H25 H 0 1 N N N 6.985 41.625 -2.680 -5.787 1.342 -1.760 H25 6MG 56 6MG H26 H26 H 0 1 N N N 11.315 37.842 -1.900 -1.478 -2.930 0.225 H26 6MG 57 6MG H27 H27 H 0 1 N N N 10.621 39.496 -1.792 -2.830 -2.524 1.310 H27 6MG 58 6MG H28 H28 H 0 1 N N N 12.978 40.396 -6.213 1.926 0.197 2.514 H28 6MG 59 6MG H29 H29 H 0 1 N N N 11.247 40.871 -6.272 1.838 -1.573 2.678 H29 6MG 60 6MG H30 H30 H 0 1 N N N 13.836 42.428 -10.119 6.102 1.911 1.119 H30 6MG 61 6MG H31 H31 H 0 1 N N N 13.051 41.996 -11.676 5.351 1.956 -0.494 H31 6MG 62 6MG H32 H32 H 0 1 N N N 14.219 40.562 -13.297 8.305 0.936 1.437 H32 6MG 63 6MG H33 H33 H 0 1 N N N 16.428 39.963 -14.222 10.481 0.412 0.410 H33 6MG 64 6MG H34 H34 H 0 1 N N N 18.479 40.140 -12.836 10.670 0.212 -2.037 H34 6MG 65 6MG H35 H35 H 0 1 N N N 18.315 41.141 -10.562 8.684 0.537 -3.456 H35 6MG 66 6MG H36 H36 H 0 1 N N N 16.121 41.778 -9.646 6.507 1.053 -2.428 H36 6MG 67 6MG H37 H37 H 0 1 N N N 12.237 36.765 -6.679 0.601 -2.979 0.440 H37 6MG 68 6MG H38 H38 H 0 1 N N N 11.353 39.448 -8.514 3.677 -1.751 1.166 H38 6MG 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6MG C54 C52 DOUB Y N 1 6MG C54 C56 SING Y N 2 6MG C52 C51 SING Y N 3 6MG C56 C58 DOUB Y N 4 6MG C51 C50 SING N N 5 6MG C51 C60 DOUB Y N 6 6MG C58 C60 SING Y N 7 6MG C50 O49 SING N N 8 6MG O49 C48 SING N N 9 6MG C48 O64 DOUB N N 10 6MG C48 N47 SING N N 11 6MG N47 C46 SING N N 12 6MG C46 P44 SING N N 13 6MG O45 P44 DOUB N N 14 6MG O68 P44 SING N N 15 6MG P44 N1 SING N N 16 6MG C16 C7 SING N N 17 6MG C5 N4 SING N N 18 6MG C5 C6 SING N N 19 6MG N1 C2 SING N N 20 6MG C8 C7 SING N N 21 6MG N4 C3 SING N N 22 6MG O28 C3 DOUB N N 23 6MG C3 C2 SING N N 24 6MG C7 C6 SING N N 25 6MG C7 C12 SING N N 26 6MG C2 C29 SING N N 27 6MG C6 C20 SING N N 28 6MG C29 C30 SING N N 29 6MG C31 C30 SING N N 30 6MG C30 C35 SING N N 31 6MG C2 H1 SING N N 32 6MG C8 H2 SING N N 33 6MG C8 H3 SING N N 34 6MG C8 H4 SING N N 35 6MG C12 H5 SING N N 36 6MG C12 H6 SING N N 37 6MG C12 H7 SING N N 38 6MG C16 H8 SING N N 39 6MG C16 H9 SING N N 40 6MG C16 H10 SING N N 41 6MG C20 H11 SING N N 42 6MG C20 H12 SING N N 43 6MG C20 H13 SING N N 44 6MG C30 H14 SING N N 45 6MG C31 H15 SING N N 46 6MG C31 H16 SING N N 47 6MG C31 H17 SING N N 48 6MG C35 H18 SING N N 49 6MG C35 H19 SING N N 50 6MG C35 H20 SING N N 51 6MG N1 H21 SING N N 52 6MG N4 H22 SING N N 53 6MG C5 H23 SING N N 54 6MG C5 H24 SING N N 55 6MG C6 H25 SING N N 56 6MG C29 H26 SING N N 57 6MG C29 H27 SING N N 58 6MG C46 H28 SING N N 59 6MG C46 H29 SING N N 60 6MG C50 H30 SING N N 61 6MG C50 H31 SING N N 62 6MG C52 H32 SING N N 63 6MG C54 H33 SING N N 64 6MG C56 H34 SING N N 65 6MG C58 H35 SING N N 66 6MG C60 H36 SING N N 67 6MG O68 H37 SING N N 68 6MG N47 H38 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6MG SMILES ACDLabs 12.01 "C(CC(C)C)(C(=O)NCC(C(C)(C)C)C)NP(=O)(CNC(=O)OCc1ccccc1)O" 6MG InChI InChI 1.03 "InChI=1S/C22H38N3O5P/c1-16(2)12-19(20(26)23-13-17(3)22(4,5)6)25-31(28,29)15-24-21(27)30-14-18-10-8-7-9-11-18/h7-11,16-17,19H,12-15H2,1-6H3,(H,23,26)(H,24,27)(H2,25,28,29)/t17-,19+/m1/s1" 6MG InChIKey InChI 1.03 XXIXMIAOXNBYOY-MJGOQNOKSA-N 6MG SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)NC[C@@H](C)C(C)(C)C" 6MG SMILES CACTVS 3.385 "CC(C)C[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)NC[CH](C)C(C)(C)C" 6MG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "C[C@H](CNC(=O)[C@H](CC(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O)C(C)(C)C" 6MG SMILES "OpenEye OEToolkits" 2.0.4 "CC(C)CC(C(=O)NCC(C)C(C)(C)C)NP(=O)(CNC(=O)OCc1ccccc1)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6MG "SYSTEMATIC NAME" ACDLabs 12.01 "N~2~-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-[(2S)-2,3,3-trimethylbutyl]-L-leucinamide" 6MG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}-[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-2,3,3-trimethylbutyl]amino]pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6MG "Create component" 2016-05-09 EBI 6MG "Initial release" 2016-12-21 RCSB #