data_6MX # _chem_comp.id 6MX _chem_comp.name "2-[(3~{R})-1-[6-cyclohexylsulfanyl-5-[[(1~{R},3~{S})-5-oxidanyl-2-adamantyl]carbamoyl]pyridin-2-yl]pyrrolidin-3-yl]ethanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H39 N3 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-05-30 _chem_comp.pdbx_modified_date 2016-12-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 513.692 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6MX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5L58 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6MX O2 O1 O 0 1 N N N 15.155 25.639 181.487 -2.207 -1.453 0.223 O2 6MX 1 6MX C17 C1 C 0 1 N N N 15.173 24.423 181.592 -2.070 -0.244 0.220 C17 6MX 2 6MX N2 N1 N 0 1 N N N 16.227 23.714 181.198 -3.144 0.556 0.371 N2 6MX 3 6MX C18 C2 C 0 1 N N R 17.459 24.383 180.828 -4.476 -0.030 0.540 C18 6MX 4 6MX C23 C3 C 0 1 N N S 18.485 24.261 181.946 -5.376 0.956 1.286 C23 6MX 5 6MX C22 C4 C 0 1 N N N 18.844 22.796 182.172 -5.488 2.253 0.482 C22 6MX 6 6MX C24 C5 C 0 1 N N N 19.748 25.028 181.573 -6.767 0.345 1.462 C24 6MX 7 6MX C25 C6 C 0 1 N N N 20.330 24.445 180.288 -7.370 0.043 0.089 C25 6MX 8 6MX O3 O2 O 0 1 N N N 21.507 25.172 179.923 -8.669 -0.529 0.253 O3 6MX 9 6MX C26 C7 C 0 1 N N N 20.683 22.980 180.514 -7.481 1.339 -0.716 C26 6MX 10 6MX C21 C8 C 0 1 N N N 19.427 22.201 180.894 -6.090 1.952 -0.892 C21 6MX 11 6MX C20 C9 C 0 1 N N N 18.401 22.325 179.770 -5.190 0.965 -1.638 C20 6MX 12 6MX C27 C10 C 0 1 N N N 19.306 24.550 179.160 -6.469 -0.944 -0.657 C27 6MX 13 6MX C19 C11 C 0 1 N N R 18.042 23.791 179.552 -5.078 -0.332 -0.834 C19 6MX 14 6MX C9 C12 C 0 1 Y N N 13.978 23.735 182.185 -0.732 0.344 0.056 C9 6MX 15 6MX C8 C13 C 0 1 Y N N 12.824 24.472 182.421 -0.561 1.736 0.051 C8 6MX 16 6MX C7 C14 C 0 1 Y N N 11.714 23.847 182.974 0.702 2.240 -0.104 C7 6MX 17 6MX C10 C15 C 0 1 Y N N 14.004 22.388 182.511 0.398 -0.481 -0.091 C10 6MX 18 6MX S S1 S 0 1 N N N 15.379 21.433 182.252 0.213 -2.233 -0.082 S 6MX 19 6MX C11 C16 C 0 1 N N N 14.866 19.743 182.321 1.939 -2.733 -0.301 C11 6MX 20 6MX C16 C17 C 0 1 N N N 14.850 19.268 183.771 2.014 -4.254 -0.449 C16 6MX 21 6MX C15 C18 C 0 1 N N N 14.371 17.824 183.854 3.473 -4.677 -0.634 C15 6MX 22 6MX C14 C19 C 0 1 N N N 15.258 16.912 183.015 4.288 -4.242 0.585 C14 6MX 23 6MX C13 C20 C 0 1 N N N 15.343 17.409 181.575 4.213 -2.721 0.733 C13 6MX 24 6MX C12 C21 C 0 1 N N N 15.818 18.857 181.528 2.754 -2.298 0.918 C12 6MX 25 6MX N1 N2 N 0 1 Y N N 12.915 21.800 183.048 1.601 0.054 -0.238 N1 6MX 26 6MX C6 C22 C 0 1 Y N N 11.783 22.493 183.281 1.779 1.367 -0.251 C6 6MX 27 6MX N N3 N 0 1 N N N 10.688 21.828 183.841 3.055 1.880 -0.407 N 6MX 28 6MX C4 C23 C 0 1 N N N 10.795 20.433 184.235 3.467 2.656 0.790 C4 6MX 29 6MX C3 C24 C 0 1 N N N 9.583 20.283 185.145 5.012 2.686 0.679 C3 6MX 30 6MX C5 C25 C 0 1 N N N 9.414 22.492 184.059 4.050 0.794 -0.546 C5 6MX 31 6MX C2 C26 C 0 1 N N R 8.781 21.579 185.104 5.346 1.280 0.128 C2 6MX 32 6MX C1 C27 C 0 1 N N N 7.329 21.279 184.754 6.478 1.367 -0.898 C1 6MX 33 6MX C C28 C 0 1 N N N 6.739 20.407 185.836 7.764 1.725 -0.198 C 6MX 34 6MX O1 O3 O 0 1 N N N 6.869 20.710 187.011 8.898 1.857 -0.905 O1 6MX 35 6MX O O4 O 0 1 N N N 6.068 19.302 185.526 7.774 1.893 0.998 O 6MX 36 6MX H1 H1 H 0 1 N N N 16.170 22.716 181.157 -3.035 1.520 0.368 H1 6MX 37 6MX H2 H2 H 0 1 N N N 17.257 25.451 180.656 -4.396 -0.954 1.113 H2 6MX 38 6MX H3 H3 H 0 1 N N N 18.065 24.680 182.873 -4.947 1.172 2.265 H3 6MX 39 6MX H4 H4 H 0 1 N N N 17.939 22.238 182.454 -6.129 2.956 1.013 H4 6MX 40 6MX H5 H5 H 0 1 N N N 19.587 22.723 182.980 -4.497 2.689 0.356 H5 6MX 41 6MX H6 H6 H 0 1 N N N 20.485 24.939 182.384 -6.688 -0.579 2.035 H6 6MX 42 6MX H7 H7 H 0 1 N N N 19.501 26.089 181.417 -7.409 1.048 1.994 H7 6MX 43 6MX H8 H8 H 0 1 N N N 22.148 25.110 180.622 -9.111 -0.746 -0.579 H8 6MX 44 6MX H9 H9 H 0 1 N N N 21.109 22.560 179.591 -7.910 1.125 -1.694 H9 6MX 45 6MX H10 H10 H 0 1 N N N 21.421 22.903 181.326 -8.123 2.043 -0.184 H10 6MX 46 6MX H11 H11 H 0 1 N N N 19.678 21.142 181.055 -6.169 2.875 -1.465 H11 6MX 47 6MX H12 H12 H 0 1 N N N 17.494 21.764 180.041 -5.619 0.750 -2.616 H12 6MX 48 6MX H13 H13 H 0 1 N N N 18.825 21.912 178.843 -4.199 1.401 -1.763 H13 6MX 49 6MX H14 H14 H 0 1 N N N 19.726 24.114 178.241 -6.390 -1.868 -0.084 H14 6MX 50 6MX H15 H15 H 0 1 N N N 19.060 25.608 178.985 -6.898 -1.159 -1.636 H15 6MX 51 6MX H16 H16 H 0 1 N N N 17.303 23.869 178.741 -4.437 -1.035 -1.365 H16 6MX 52 6MX H17 H17 H 0 1 N N N 12.791 25.523 182.176 -1.408 2.396 0.165 H17 6MX 53 6MX H18 H18 H 0 1 N N N 10.809 24.405 183.163 0.863 3.308 -0.112 H18 6MX 54 6MX H19 H19 H 0 1 N N N 13.854 19.691 181.894 2.343 -2.261 -1.196 H19 6MX 55 6MX H20 H20 H 0 1 N N N 15.867 19.337 184.186 1.610 -4.727 0.446 H20 6MX 56 6MX H21 H21 H 0 1 N N N 14.172 19.908 184.354 1.433 -4.564 -1.317 H21 6MX 57 6MX H22 H22 H 0 1 N N N 13.338 17.765 183.482 3.526 -5.760 -0.740 H22 6MX 58 6MX H23 H23 H 0 1 N N N 14.402 17.493 184.903 3.877 -4.204 -1.530 H23 6MX 59 6MX H24 H24 H 0 1 N N N 14.837 15.896 183.021 3.884 -4.714 1.480 H24 6MX 60 6MX H25 H25 H 0 1 N N N 16.268 16.893 183.450 5.328 -4.543 0.453 H25 6MX 61 6MX H26 H26 H 0 1 N N N 14.348 17.341 181.111 4.794 -2.411 1.601 H26 6MX 62 6MX H27 H27 H 0 1 N N N 16.052 16.779 181.017 4.617 -2.248 -0.162 H27 6MX 63 6MX H28 H28 H 0 1 N N N 16.826 18.924 181.963 2.701 -1.215 1.023 H28 6MX 64 6MX H29 H29 H 0 1 N N N 15.847 19.197 180.482 2.350 -2.771 1.813 H29 6MX 65 6MX H30 H30 H 0 1 N N N 10.730 19.763 183.365 3.059 3.666 0.753 H30 6MX 66 6MX H31 H31 H 0 1 N N N 11.732 20.239 184.778 3.157 2.148 1.704 H31 6MX 67 6MX H32 H32 H 0 1 N N N 8.957 19.449 184.795 5.334 3.460 -0.017 H32 6MX 68 6MX H33 H33 H 0 1 N N N 9.915 20.085 186.175 5.467 2.837 1.659 H33 6MX 69 6MX H34 H34 H 0 1 N N N 9.552 23.513 184.445 3.688 -0.106 -0.049 H34 6MX 70 6MX H35 H35 H 0 1 N N N 8.814 22.527 183.137 4.233 0.591 -1.601 H35 6MX 71 6MX H36 H36 H 0 1 N N N 8.826 22.067 186.089 5.623 0.611 0.942 H36 6MX 72 6MX H37 H37 H 0 1 N N N 6.763 22.220 184.687 6.591 0.405 -1.396 H37 6MX 73 6MX H38 H38 H 0 1 N N N 7.282 20.753 183.789 6.240 2.133 -1.636 H38 6MX 74 6MX H39 H39 H 0 1 N N N 6.439 20.061 187.555 9.697 2.088 -0.412 H39 6MX 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6MX C27 C19 SING N N 1 6MX C27 C25 SING N N 2 6MX C19 C20 SING N N 3 6MX C19 C18 SING N N 4 6MX C20 C21 SING N N 5 6MX O3 C25 SING N N 6 6MX C25 C26 SING N N 7 6MX C25 C24 SING N N 8 6MX C26 C21 SING N N 9 6MX C18 N2 SING N N 10 6MX C18 C23 SING N N 11 6MX C21 C22 SING N N 12 6MX N2 C17 SING N N 13 6MX O2 C17 DOUB N N 14 6MX C12 C13 SING N N 15 6MX C12 C11 SING N N 16 6MX C24 C23 SING N N 17 6MX C13 C14 SING N N 18 6MX C17 C9 SING N N 19 6MX C23 C22 SING N N 20 6MX C9 C8 DOUB Y N 21 6MX C9 C10 SING Y N 22 6MX S C11 SING N N 23 6MX S C10 SING N N 24 6MX C11 C16 SING N N 25 6MX C8 C7 SING Y N 26 6MX C10 N1 DOUB Y N 27 6MX C7 C6 DOUB Y N 28 6MX C14 C15 SING N N 29 6MX N1 C6 SING Y N 30 6MX C6 N SING N N 31 6MX C16 C15 SING N N 32 6MX N C5 SING N N 33 6MX N C4 SING N N 34 6MX C5 C2 SING N N 35 6MX C4 C3 SING N N 36 6MX C1 C2 SING N N 37 6MX C1 C SING N N 38 6MX C2 C3 SING N N 39 6MX O C DOUB N N 40 6MX C O1 SING N N 41 6MX N2 H1 SING N N 42 6MX C18 H2 SING N N 43 6MX C23 H3 SING N N 44 6MX C22 H4 SING N N 45 6MX C22 H5 SING N N 46 6MX C24 H6 SING N N 47 6MX C24 H7 SING N N 48 6MX O3 H8 SING N N 49 6MX C26 H9 SING N N 50 6MX C26 H10 SING N N 51 6MX C21 H11 SING N N 52 6MX C20 H12 SING N N 53 6MX C20 H13 SING N N 54 6MX C27 H14 SING N N 55 6MX C27 H15 SING N N 56 6MX C19 H16 SING N N 57 6MX C8 H17 SING N N 58 6MX C7 H18 SING N N 59 6MX C11 H19 SING N N 60 6MX C16 H20 SING N N 61 6MX C16 H21 SING N N 62 6MX C15 H22 SING N N 63 6MX C15 H23 SING N N 64 6MX C14 H24 SING N N 65 6MX C14 H25 SING N N 66 6MX C13 H26 SING N N 67 6MX C13 H27 SING N N 68 6MX C12 H28 SING N N 69 6MX C12 H29 SING N N 70 6MX C4 H30 SING N N 71 6MX C4 H31 SING N N 72 6MX C3 H32 SING N N 73 6MX C3 H33 SING N N 74 6MX C5 H34 SING N N 75 6MX C5 H35 SING N N 76 6MX C2 H36 SING N N 77 6MX C1 H37 SING N N 78 6MX C1 H38 SING N N 79 6MX O1 H39 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6MX InChI InChI 1.03 "InChI=1S/C28H39N3O4S/c32-24(33)12-17-8-9-31(16-17)23-7-6-22(27(29-23)36-21-4-2-1-3-5-21)26(34)30-25-19-10-18-11-20(25)15-28(35,13-18)14-19/h6-7,17-21,25,35H,1-5,8-16H2,(H,30,34)(H,32,33)/t17-,18-,19-,20+,25-,28-/m1/s1" 6MX InChIKey InChI 1.03 IYMNIQIFFGLPGI-MYDIHDSKSA-N 6MX SMILES_CANONICAL CACTVS 3.385 "OC(=O)C[C@H]1CCN(C1)c2ccc(C(=O)N[C@H]3[C@H]4CC5C[C@@H]3CC(O)(C5)C4)c(SC6CCCCC6)n2" 6MX SMILES CACTVS 3.385 "OC(=O)C[CH]1CCN(C1)c2ccc(C(=O)N[CH]3[CH]4CC5C[CH]3CC(O)(C5)C4)c(SC6CCCCC6)n2" 6MX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "c1cc(nc(c1C(=O)NC2[C@@H]3CC4C[C@H]2CC(C3)(C4)O)SC5CCCCC5)N6CC[C@@H](C6)CC(=O)O" 6MX SMILES "OpenEye OEToolkits" 2.0.5 "c1cc(nc(c1C(=O)NC2C3CC4CC2CC(C4)(C3)O)SC5CCCCC5)N6CCC(C6)CC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6MX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "2-[(3~{R})-1-[6-cyclohexylsulfanyl-5-[[(1~{R},3~{S})-5-oxidanyl-2-adamantyl]carbamoyl]pyridin-2-yl]pyrrolidin-3-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6MX "Create component" 2016-05-30 EBI 6MX "Initial release" 2016-12-14 RCSB #