data_6N2 # _chem_comp.id 6N2 _chem_comp.name "N-(2-{[2-(morpholin-4-yl)ethyl]amino}-1H-benzimidazol-5-yl)guanidine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H21 N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-05-10 _chem_comp.pdbx_modified_date 2017-05-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 303.363 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6N2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5JT7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6N2 N1 N1 N 0 1 N N N 104.202 16.559 24.775 7.770 0.653 0.189 N1 6N2 1 6N2 C2 C1 C 0 1 Y N N 107.533 17.000 21.911 3.814 -1.975 -0.199 C2 6N2 2 6N2 N3 N2 N 0 1 Y N N 108.591 17.953 18.476 0.269 -0.761 -0.219 N3 6N2 3 6N2 C4 C2 C 0 1 Y N N 107.964 17.533 19.636 1.638 -0.976 -0.150 C4 6N2 4 6N2 N4 N3 N 0 1 N N N 107.914 18.728 16.383 -1.188 1.158 0.131 N4 6N2 5 6N2 C5 C3 C 0 1 Y N N 107.610 18.237 17.589 0.050 0.551 0.087 C5 6N2 6 6N2 C6 C4 C 0 1 N N N 106.942 19.398 15.530 -2.395 0.380 -0.154 C6 6N2 7 6N2 C C5 C 0 1 N N N 105.290 16.829 24.059 6.424 0.513 -0.059 C 6N2 8 6N2 N N4 N 0 1 N N N 106.552 17.006 24.672 5.760 1.485 -0.618 N 6N2 9 6N2 N2 N5 N 0 1 N N N 105.195 16.941 22.701 5.779 -0.653 0.284 N2 6N2 10 6N2 C1 C6 C 0 1 Y N N 106.159 17.069 21.665 4.389 -0.753 0.141 C1 6N2 11 6N2 C13 C7 C 0 1 Y N N 105.684 17.304 20.376 3.595 0.362 0.338 C13 6N2 12 6N2 C12 C8 C 0 1 Y N N 106.599 17.575 19.361 2.210 0.260 0.194 C12 6N2 13 6N2 C3 C9 C 0 1 Y N N 108.447 17.217 20.894 2.447 -2.084 -0.349 C3 6N2 14 6N2 N6 N6 N 0 1 Y N N 106.395 18.019 18.052 1.191 1.150 0.324 N6 6N2 15 6N2 H1 H1 H 0 1 N N N 104.266 16.477 25.770 8.224 1.475 -0.053 H1 6N2 16 6N2 H2 H2 H 0 1 N N N 103.320 16.438 24.319 8.263 -0.068 0.609 H2 6N2 17 6N2 H3 H3 H 0 1 N N N 107.886 16.775 22.906 4.442 -2.840 -0.351 H3 6N2 18 6N2 H4 H4 H 0 1 N N N 109.576 18.031 18.323 -0.406 -1.421 -0.442 H4 6N2 19 6N2 H5 H5 H 0 1 N N N 108.261 17.956 15.851 -1.258 2.100 0.351 H5 6N2 20 6N2 H6 H6 H 0 1 N N N 106.976 20.446 15.862 -2.337 -0.025 -1.164 H6 6N2 21 6N2 H7 H7 H 0 1 N N N 107.375 19.319 14.522 -2.478 -0.439 0.561 H7 6N2 22 6N2 H9 H9 H 0 1 N N N 106.504 16.903 25.666 6.214 2.307 -0.860 H9 6N2 23 6N2 H10 H10 H 0 1 N N N 104.252 16.931 22.367 6.287 -1.406 0.625 H10 6N2 24 6N2 H11 H11 H 0 1 N N N 104.625 17.276 20.168 4.045 1.308 0.602 H11 6N2 25 6N2 H12 H12 H 0 1 N N N 109.509 17.142 21.077 2.007 -3.034 -0.613 H12 6N2 26 6N2 C7 C10 C 0 1 N N N ? ? ? -3.624 1.284 -0.038 C7 6N2 27 6N2 N5 N7 N 0 1 N N N ? ? ? -4.835 0.504 -0.324 N5 6N2 28 6N2 C9 C11 C 0 1 N N N ? ? ? -6.046 1.270 0.007 C9 6N2 29 6N2 C10 C12 C 0 1 N N N ? ? ? -7.282 0.445 -0.362 C10 6N2 30 6N2 O1 O1 O 0 1 N N N ? ? ? -7.232 -0.810 0.322 O1 6N2 31 6N2 C14 C14 C 0 1 N N N ? ? ? -6.066 -1.583 0.023 C14 6N2 32 6N2 C15 C15 C 0 1 N N N ? ? ? -4.818 -0.778 0.395 C15 6N2 33 6N2 H8 H8 H 0 1 N N N ? ? ? -3.683 1.689 0.972 H8 6N2 34 6N2 H13 H13 H 0 1 N N N ? ? ? -3.542 2.103 -0.753 H13 6N2 35 6N2 H14 H14 H 0 1 N N N ? ? ? -6.058 1.488 1.074 H14 6N2 36 6N2 H15 H15 H 0 1 N N N ? ? ? -6.051 2.204 -0.556 H15 6N2 37 6N2 H16 H16 H 0 1 N N N ? ? ? -8.181 0.985 -0.066 H16 6N2 38 6N2 H17 H17 H 0 1 N N N ? ? ? -7.297 0.273 -1.438 H17 6N2 39 6N2 H18 H18 H 0 1 N N N ? ? ? -6.087 -2.509 0.597 H18 6N2 40 6N2 H19 H19 H 0 1 N N N ? ? ? -6.046 -1.814 -1.042 H19 6N2 41 6N2 H20 H20 H 0 1 N N N ? ? ? -3.927 -1.340 0.116 H20 6N2 42 6N2 H21 H21 H 0 1 N N N ? ? ? -4.811 -0.593 1.469 H21 6N2 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6N2 C6 N4 SING N N 1 6N2 N4 C5 SING N N 2 6N2 C5 N6 DOUB Y N 3 6N2 C5 N3 SING Y N 4 6N2 N6 C12 SING Y N 5 6N2 N3 C4 SING Y N 6 6N2 C12 C4 DOUB Y N 7 6N2 C12 C13 SING Y N 8 6N2 C4 C3 SING Y N 9 6N2 C13 C1 DOUB Y N 10 6N2 C3 C2 DOUB Y N 11 6N2 C1 C2 SING Y N 12 6N2 C1 N2 SING N N 13 6N2 N2 C SING N N 14 6N2 C N DOUB N N 15 6N2 C N1 SING N N 16 6N2 N1 H1 SING N N 17 6N2 N1 H2 SING N N 18 6N2 C2 H3 SING N N 19 6N2 N3 H4 SING N N 20 6N2 N4 H5 SING N N 21 6N2 C6 H6 SING N N 22 6N2 C6 H7 SING N N 23 6N2 N H9 SING N N 24 6N2 N2 H10 SING N N 25 6N2 C13 H11 SING N N 26 6N2 C3 H12 SING N N 27 6N2 C6 C7 SING N N 28 6N2 C7 N5 SING N N 29 6N2 N5 C9 SING N N 30 6N2 C9 C10 SING N N 31 6N2 C10 O1 SING N N 32 6N2 O1 C14 SING N N 33 6N2 C14 C15 SING N N 34 6N2 C15 N5 SING N N 35 6N2 C7 H8 SING N N 36 6N2 C7 H13 SING N N 37 6N2 C9 H14 SING N N 38 6N2 C9 H15 SING N N 39 6N2 C10 H16 SING N N 40 6N2 C10 H17 SING N N 41 6N2 C14 H18 SING N N 42 6N2 C14 H19 SING N N 43 6N2 C15 H20 SING N N 44 6N2 C15 H21 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6N2 SMILES ACDLabs 12.01 "N\C(=N)Nc3ccc2nc(NCCN1CCOCC1)nc2c3" 6N2 InChI InChI 1.03 "InChI=1S/C14H21N7O/c15-13(16)18-10-1-2-11-12(9-10)20-14(19-11)17-3-4-21-5-7-22-8-6-21/h1-2,9H,3-8H2,(H4,15,16,18)(H2,17,19,20)" 6N2 InChIKey InChI 1.03 GUEKBGQUTZFSQX-UHFFFAOYSA-N 6N2 SMILES_CANONICAL CACTVS 3.385 "NC(=N)Nc1ccc2[nH]c(NCCN3CCOCC3)nc2c1" 6N2 SMILES CACTVS 3.385 "NC(=N)Nc1ccc2[nH]c(NCCN3CCOCC3)nc2c1" 6N2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "[H]/N=C(/N)\Nc1ccc2c(c1)nc([nH]2)NCCN3CCOCC3" 6N2 SMILES "OpenEye OEToolkits" 2.0.4 "c1cc2c(cc1NC(=N)N)nc([nH]2)NCCN3CCOCC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6N2 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(2-{[2-(morpholin-4-yl)ethyl]amino}-1H-benzimidazol-5-yl)guanidine" 6N2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "1-[2-(2-morpholin-4-ylethylamino)-1~{H}-benzimidazol-5-yl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6N2 "Create component" 2016-05-10 RCSB 6N2 "Initial release" 2017-05-24 RCSB #