data_6PX # _chem_comp.id 6PX _chem_comp.name "methyl N-[4-amino-3-(L-arginylamino)benzene-1-carbonyl]-L-tyrosinate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H31 N7 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-05-19 _chem_comp.pdbx_modified_date 2017-03-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 485.536 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6PX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5K1V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6PX C1 C1 C 0 1 N N S 18.641 4.583 1.522 4.185 0.213 1.484 C1 6PX 1 6PX C2 C2 C 0 1 N N N 20.039 4.233 0.987 2.811 0.128 0.872 C2 6PX 2 6PX C4 C3 C 0 1 N N N 16.608 3.244 2.614 6.635 0.143 1.001 C4 6PX 3 6PX C6 C4 C 0 1 N N N 13.857 3.563 5.130 10.140 -0.129 -0.290 C6 6PX 4 6PX C8 C5 C 0 1 Y N N 21.953 2.778 2.116 1.083 1.054 -0.480 C8 6PX 5 6PX C10 C6 C 0 1 Y N N 24.383 1.561 2.879 -1.363 0.831 -1.788 C10 6PX 6 6PX C13 C7 C 0 1 Y N N 22.152 1.404 1.935 0.070 0.306 0.090 C13 6PX 7 6PX C19 C8 C 0 1 Y N N 19.931 -1.708 2.003 -5.656 1.473 -0.787 C19 6PX 8 6PX C21 C9 C 0 1 Y N N 19.908 -2.473 0.871 -5.867 2.766 -0.351 C21 6PX 9 6PX C23 C10 C 0 1 N N N 21.377 -1.133 8.255 -4.986 -5.251 -0.327 C23 6PX 10 6PX N1 N1 N 0 1 N N N 17.705 4.789 0.407 4.305 -0.781 2.558 N1 6PX 11 6PX O1 O1 O 0 1 N N N 20.600 4.953 0.170 2.145 -0.877 1.013 O1 6PX 12 6PX C3 C11 C 0 1 N N N 18.146 3.474 2.498 5.239 -0.065 0.411 C3 6PX 13 6PX C5 C12 C 0 1 N N N 15.945 3.956 3.803 7.690 -0.135 -0.072 C5 6PX 14 6PX N2 N2 N 0 1 N N N 14.969 3.113 4.529 9.026 0.065 0.493 N2 6PX 15 6PX N3 N3 N 0 1 N N N 13.530 4.856 5.084 10.006 -0.490 -1.535 N3 6PX 16 6PX N4 N4 N 0 1 N N N 13.052 2.716 5.770 11.394 0.058 0.240 N4 6PX 17 6PX C7 C13 C 0 1 N N N 23.554 -0.685 2.227 -2.245 -0.607 0.041 C7 6PX 18 6PX N5 N5 N 0 1 N N N 20.720 3.338 1.689 2.320 1.168 0.168 N5 6PX 19 6PX O2 O2 O 0 1 N N N 24.462 -1.205 1.539 -2.069 -1.163 1.108 O2 6PX 20 6PX C9 C14 C 0 1 Y N N 22.982 3.541 2.680 0.874 1.692 -1.706 C9 6PX 21 6PX N6 N6 N 0 1 N N N 22.824 4.917 2.888 1.894 2.446 -2.280 N6 6PX 22 6PX C11 C15 C 0 1 Y N N 23.356 0.787 2.309 -1.161 0.191 -0.563 C11 6PX 23 6PX C12 C16 C 0 1 Y N N 24.188 2.928 3.056 -0.351 1.576 -2.353 C12 6PX 24 6PX N7 N7 N 0 1 N N N 23.202 -0.962 3.653 -3.432 -0.717 -0.588 N7 6PX 25 6PX C14 C17 C 0 1 N N S 22.158 -0.542 4.626 -4.509 -1.509 0.012 C14 6PX 26 6PX C15 C18 C 0 1 N N N 22.578 -0.856 6.064 -4.337 -2.958 -0.365 C15 6PX 27 6PX O3 O3 O 0 1 N N N 23.772 -0.819 6.392 -3.410 -3.295 -1.063 O3 6PX 28 6PX C16 C19 C 0 1 N N N 20.786 -1.205 4.341 -5.859 -1.005 -0.502 C16 6PX 29 6PX C17 C20 C 0 1 Y N N 20.743 -2.055 3.076 -6.085 0.405 -0.021 C17 6PX 30 6PX C18 C21 C 0 1 Y N N 21.516 -3.218 2.966 -6.721 0.629 1.187 C18 6PX 31 6PX C20 C22 C 0 1 Y N N 21.502 -3.981 1.830 -6.929 1.921 1.630 C20 6PX 32 6PX C22 C23 C 0 1 Y N N 20.704 -3.608 0.793 -6.510 2.994 0.857 C22 6PX 33 6PX O4 O4 O 0 1 N N N 20.719 -4.391 -0.326 -6.718 4.266 1.289 O4 6PX 34 6PX O5 O5 O 0 1 N N N 21.445 -1.115 6.838 -5.213 -3.874 0.075 O5 6PX 35 6PX H1 H1 H 0 1 N N N 18.722 5.519 2.094 4.339 1.211 1.894 H1 6PX 36 6PX H2 H2 H 0 1 N N N 16.136 3.607 1.689 6.733 1.172 1.348 H2 6PX 37 6PX H3 H3 H 0 1 N N N 16.429 2.164 2.717 6.781 -0.538 1.839 H3 6PX 38 6PX H4 H4 H 0 1 N N N 25.313 1.100 3.176 -2.314 0.743 -2.293 H4 6PX 39 6PX H5 H5 H 0 1 N N N 21.364 0.808 1.499 0.229 -0.188 1.036 H5 6PX 40 6PX H6 H6 H 0 1 N N N 19.312 -0.825 2.064 -5.160 1.295 -1.730 H6 6PX 41 6PX H7 H7 H 0 1 N N N 19.274 -2.196 0.042 -5.531 3.600 -0.950 H7 6PX 42 6PX H8 H8 H 0 1 N N N 20.350 -1.367 8.570 -5.764 -5.886 0.096 H8 6PX 43 6PX H9 H9 H 0 1 N N N 22.064 -1.899 8.645 -5.010 -5.320 -1.414 H9 6PX 44 6PX H10 H10 H 0 1 N N N 21.665 -0.147 8.648 -4.012 -5.579 0.036 H10 6PX 45 6PX H11 H11 H 0 1 N N N 16.800 5.016 0.768 4.167 -1.716 2.203 H11 6PX 46 6PX H12 H12 H 0 1 N N N 18.032 5.539 -0.168 5.195 -0.701 3.027 H12 6PX 47 6PX H14 H14 H 0 1 N N N 18.596 2.525 2.172 5.142 -1.094 0.064 H14 6PX 48 6PX H15 H15 H 0 1 N N N 18.516 3.730 3.502 5.094 0.616 -0.427 H15 6PX 49 6PX H16 H16 H 0 1 N N N 16.732 4.262 4.508 7.592 -1.164 -0.419 H16 6PX 50 6PX H17 H17 H 0 1 N N N 15.422 4.848 3.427 7.544 0.546 -0.910 H17 6PX 51 6PX H18 H18 H 0 1 N N N 15.153 2.131 4.575 9.126 0.333 1.420 H18 6PX 52 6PX H19 H19 H 0 1 N N N 12.672 5.043 5.563 10.792 -0.627 -2.088 H19 6PX 53 6PX H20 H20 H 0 1 N N N 12.218 3.052 6.206 11.494 0.327 1.167 H20 6PX 54 6PX H21 H21 H 0 1 N N N 13.282 1.744 5.814 12.180 -0.078 -0.312 H21 6PX 55 6PX H22 H22 H 0 1 N N N 20.020 2.784 2.140 2.824 1.995 0.111 H22 6PX 56 6PX H23 H23 H 0 1 N N N 23.657 5.291 3.296 2.749 2.528 -1.829 H23 6PX 57 6PX H24 H24 H 0 1 N N N 22.650 5.369 2.013 1.750 2.889 -3.130 H24 6PX 58 6PX H25 H25 H 0 1 N N N 24.976 3.526 3.489 -0.509 2.070 -3.300 H25 6PX 59 6PX H26 H26 H 0 1 N N N 23.845 -1.607 4.067 -3.573 -0.273 -1.439 H26 6PX 60 6PX H27 H27 H 0 1 N N N 22.025 0.547 4.544 -4.472 -1.409 1.097 H27 6PX 61 6PX H28 H28 H 0 1 N N N 20.033 -0.409 4.245 -5.863 -1.022 -1.591 H28 6PX 62 6PX H29 H29 H 0 1 N N N 20.532 -1.849 5.196 -6.654 -1.649 -0.125 H29 6PX 63 6PX H30 H30 H 0 1 N N N 22.137 -3.519 3.797 -7.055 -0.207 1.784 H30 6PX 64 6PX H31 H31 H 0 1 N N N 22.116 -4.867 1.758 -7.427 2.095 2.572 H31 6PX 65 6PX H32 H32 H 0 1 N N N 21.318 -5.117 -0.197 -7.557 4.647 0.997 H32 6PX 66 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6PX O4 C22 SING N N 1 6PX O1 C2 DOUB N N 2 6PX N1 C1 SING N N 3 6PX C22 C21 DOUB Y N 4 6PX C22 C20 SING Y N 5 6PX C21 C19 SING Y N 6 6PX C2 C1 SING N N 7 6PX C2 N5 SING N N 8 6PX C1 C3 SING N N 9 6PX O2 C7 DOUB N N 10 6PX N5 C8 SING N N 11 6PX C20 C18 DOUB Y N 12 6PX C13 C8 DOUB Y N 13 6PX C13 C11 SING Y N 14 6PX C19 C17 DOUB Y N 15 6PX C8 C9 SING Y N 16 6PX C7 C11 SING N N 17 6PX C7 N7 SING N N 18 6PX C11 C10 DOUB Y N 19 6PX C3 C4 SING N N 20 6PX C4 C5 SING N N 21 6PX C9 N6 SING N N 22 6PX C9 C12 DOUB Y N 23 6PX C10 C12 SING Y N 24 6PX C18 C17 SING Y N 25 6PX C17 C16 SING N N 26 6PX N7 C14 SING N N 27 6PX C5 N2 SING N N 28 6PX C16 C14 SING N N 29 6PX N2 C6 SING N N 30 6PX C14 C15 SING N N 31 6PX N3 C6 DOUB N N 32 6PX C6 N4 SING N N 33 6PX C15 O3 DOUB N N 34 6PX C15 O5 SING N N 35 6PX O5 C23 SING N N 36 6PX C1 H1 SING N N 37 6PX C4 H2 SING N N 38 6PX C4 H3 SING N N 39 6PX C10 H4 SING N N 40 6PX C13 H5 SING N N 41 6PX C19 H6 SING N N 42 6PX C21 H7 SING N N 43 6PX C23 H8 SING N N 44 6PX C23 H9 SING N N 45 6PX C23 H10 SING N N 46 6PX N1 H11 SING N N 47 6PX N1 H12 SING N N 48 6PX C3 H14 SING N N 49 6PX C3 H15 SING N N 50 6PX C5 H16 SING N N 51 6PX C5 H17 SING N N 52 6PX N2 H18 SING N N 53 6PX N3 H19 SING N N 54 6PX N4 H20 SING N N 55 6PX N4 H21 SING N N 56 6PX N5 H22 SING N N 57 6PX N6 H23 SING N N 58 6PX N6 H24 SING N N 59 6PX C12 H25 SING N N 60 6PX N7 H26 SING N N 61 6PX C14 H27 SING N N 62 6PX C16 H28 SING N N 63 6PX C16 H29 SING N N 64 6PX C18 H30 SING N N 65 6PX C20 H31 SING N N 66 6PX O4 H32 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6PX SMILES ACDLabs 12.01 "C(CCCNC(\N)=N)(C(Nc1c(N)ccc(c1)C(NC(C(=O)OC)Cc2ccc(cc2)O)=O)=O)N" 6PX InChI InChI 1.03 "InChI=1S/C23H31N7O5/c1-35-22(34)19(11-13-4-7-15(31)8-5-13)30-20(32)14-6-9-16(24)18(12-14)29-21(33)17(25)3-2-10-28-23(26)27/h4-9,12,17,19,31H,2-3,10-11,24-25H2,1H3,(H,29,33)(H,30,32)(H4,26,27,28)/t17-,19-/m0/s1" 6PX InChIKey InChI 1.03 JECKMXQKZJERLG-HKUYNNGSSA-N 6PX SMILES_CANONICAL CACTVS 3.385 "COC(=O)[C@H](Cc1ccc(O)cc1)NC(=O)c2ccc(N)c(NC(=O)[C@@H](N)CCCNC(N)=N)c2" 6PX SMILES CACTVS 3.385 "COC(=O)[CH](Cc1ccc(O)cc1)NC(=O)c2ccc(N)c(NC(=O)[CH](N)CCCNC(N)=N)c2" 6PX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "[H]/N=C(/N)\NCCC[C@@H](C(=O)Nc1cc(ccc1N)C(=O)N[C@@H](Cc2ccc(cc2)O)C(=O)OC)N" 6PX SMILES "OpenEye OEToolkits" 2.0.4 "COC(=O)C(Cc1ccc(cc1)O)NC(=O)c2ccc(c(c2)NC(=O)C(CCCNC(=N)N)N)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6PX "SYSTEMATIC NAME" ACDLabs 12.01 "methyl N-[4-amino-3-(L-arginylamino)benzene-1-carbonyl]-L-tyrosinate" 6PX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "methyl (2~{S})-2-[[4-azanyl-3-[[(2~{S})-2-azanyl-5-carbamimidamido-pentanoyl]amino]phenyl]carbonylamino]-3-(4-hydroxyphenyl)propanoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6PX "Create component" 2016-05-19 RCSB 6PX "Initial release" 2017-03-29 RCSB #