data_6RD # _chem_comp.id 6RD _chem_comp.name "5-(1~{H}-indol-3-ylmethyl)-1-methyl-~{N}-(naphthalen-1-ylmethyl)-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridine-3-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H27 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-06-07 _chem_comp.pdbx_modified_date 2017-03-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 449.547 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6RD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5L87 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6RD CAH C1 C 0 1 Y N N 11.819 4.416 11.409 -5.474 2.454 -0.733 CAH 6RD 1 6RD CAG C2 C 0 1 Y N N 10.560 4.012 10.917 -6.736 2.449 -1.325 CAG 6RD 2 6RD CAJ C3 C 0 1 Y N N 9.567 4.908 10.720 -7.630 1.457 -1.061 CAJ 6RD 3 6RD CBC C4 C 0 1 Y N N 9.779 6.303 10.993 -7.278 0.421 -0.179 CBC 6RD 4 6RD CAI C5 C 0 1 Y N N 8.757 7.254 10.751 -8.173 -0.621 0.117 CAI 6RD 5 6RD CAC C6 C 0 1 Y N N 8.980 8.560 11.024 -7.798 -1.608 0.976 CAC 6RD 6 6RD CAE C7 C 0 1 Y N N 10.207 8.994 11.562 -6.537 -1.602 1.568 CAE 6RD 7 6RD CAL C8 C 0 1 Y N N 11.232 8.115 11.811 -5.643 -0.609 1.305 CAL 6RD 8 6RD CBE C9 C 0 1 Y N N 11.031 6.729 11.525 -5.995 0.426 0.423 CBE 6RD 9 6RD CAX C10 C 0 1 Y N N 12.053 5.755 11.697 -5.099 1.468 0.126 CAX 6RD 10 6RD CAQ C11 C 0 1 N N N 13.426 6.193 12.183 -3.728 1.488 0.751 CAQ 6RD 11 6RD NAU N1 N 0 1 N N N 14.451 5.167 12.054 -2.847 0.568 0.027 NAU 6RD 12 6RD CAW C12 C 0 1 N N N 14.770 4.300 13.042 -1.564 0.421 0.411 CAW 6RD 13 6RD OAB O1 O 0 1 N N N 14.170 4.123 14.114 -1.137 1.052 1.358 OAB 6RD 14 6RD CBA C13 C 0 1 Y N N 15.764 3.304 12.705 -0.676 -0.507 -0.319 CBA 6RD 15 6RD CAZ C14 C 0 1 Y N N 16.372 2.338 13.548 0.674 -0.767 -0.042 CAZ 6RD 16 6RD CAS C15 C 0 1 N N N 16.174 1.979 14.981 1.572 -0.202 1.023 CAS 6RD 17 6RD NAT N2 N 0 1 Y N N 16.289 3.238 11.472 -1.001 -1.258 -1.358 NAT 6RD 18 6RD NBH N3 N 0 1 Y N N 17.215 2.259 11.516 0.018 -1.947 -1.745 NBH 6RD 19 6RD CAA C16 C 0 1 N N N 18.020 1.918 10.341 0.020 -2.885 -2.870 CAA 6RD 20 6RD CBB C17 C 0 1 Y N N 17.286 1.696 12.750 1.074 -1.680 -0.965 CBB 6RD 21 6RD CAO C18 C 0 1 N N N 18.188 0.601 13.201 2.476 -2.234 -1.014 CAO 6RD 22 6RD CAP C19 C 0 1 N N N 17.675 0.054 14.513 3.156 -1.910 0.324 CAP 6RD 23 6RD NBG N4 N 0 1 N N N 17.225 1.102 15.409 2.968 -0.494 0.650 NBG 6RD 24 6RD CAR C20 C 0 1 N N N 17.170 0.672 16.806 3.895 -0.069 1.707 CAR 6RD 25 6RD CAY C21 C 0 1 Y N N 16.064 -0.342 17.023 5.311 -0.153 1.197 CAY 6RD 26 6RD CBF C22 C 0 1 Y N N 16.107 -1.780 16.889 5.992 0.829 0.349 CBF 6RD 27 6RD CAM C23 C 0 1 Y N N 17.116 -2.686 16.541 5.614 2.046 -0.221 CAM 6RD 28 6RD CAF C24 C 0 1 Y N N 16.793 -4.057 16.553 6.507 2.743 -0.985 CAF 6RD 29 6RD CAD C25 C 0 1 Y N N 15.539 -4.539 16.842 7.787 2.250 -1.199 CAD 6RD 30 6RD CAK C26 C 0 1 Y N N 14.553 -3.642 17.200 8.180 1.051 -0.647 CAK 6RD 31 6RD CBD C27 C 0 1 Y N N 14.854 -2.269 17.229 7.288 0.325 0.135 CBD 6RD 32 6RD NAV N5 N 0 1 Y N N 14.066 -1.184 17.552 7.374 -0.873 0.808 NAV 6RD 33 6RD CAN C28 C 0 1 Y N N 14.827 -0.024 17.442 6.190 -1.139 1.439 CAN 6RD 34 6RD HAI H1 H 0 1 N N N 12.600 3.686 11.562 -4.782 3.251 -0.963 HAI 6RD 35 6RD HAH H2 H 0 1 N N N 10.387 2.970 10.694 -7.009 3.244 -2.003 HAH 6RD 36 6RD HAK H3 H 0 1 N N N 8.607 4.573 10.355 -8.604 1.466 -1.527 HAK 6RD 37 6RD HAJ H4 H 0 1 N N N 7.805 6.938 10.351 -9.155 -0.638 -0.334 HAJ 6RD 38 6RD HAD H5 H 0 1 N N N 8.203 9.283 10.826 -8.488 -2.407 1.202 HAD 6RD 39 6RD HAF H6 H 0 1 N N N 10.345 10.042 11.784 -6.264 -2.397 2.247 HAF 6RD 40 6RD HAM H7 H 0 1 N N N 12.171 8.464 12.215 -4.669 -0.618 1.771 HAM 6RD 41 6RD HAT H8 H 0 1 N N N 13.738 7.070 11.597 -3.320 2.498 0.699 HAT 6RD 42 6RD HAU H9 H 0 1 N N N 13.346 6.471 13.244 -3.799 1.178 1.793 HAU 6RD 43 6RD HBH H10 H 0 1 N N N 14.946 5.100 11.188 -3.188 0.065 -0.729 HBH 6RD 44 6RD HAX H11 H 0 1 N N N 16.189 2.893 15.592 1.428 0.876 1.093 HAX 6RD 45 6RD HAY H12 H 0 1 N N N 15.204 1.474 15.101 1.343 -0.667 1.982 HAY 6RD 46 6RD HAB H13 H 0 1 N N N 17.735 2.567 9.500 0.294 -2.357 -3.784 HAB 6RD 47 6RD HAC H14 H 0 1 N N N 19.086 2.064 10.572 0.742 -3.679 -2.680 HAC 6RD 48 6RD HAA H15 H 0 1 N N N 17.844 0.867 10.069 -0.974 -3.318 -2.984 HAA 6RD 49 6RD HAP H16 H 0 1 N N N 18.202 -0.200 12.447 2.440 -3.314 -1.158 HAP 6RD 50 6RD HAQ H17 H 0 1 N N N 19.206 0.994 13.338 3.028 -1.770 -1.831 HAQ 6RD 51 6RD HAS H18 H 0 1 N N N 16.832 -0.623 14.309 2.716 -2.521 1.112 HAS 6RD 52 6RD HAR H19 H 0 1 N N N 18.485 -0.507 15.003 4.222 -2.128 0.250 HAR 6RD 53 6RD HAV H21 H 0 1 N N N 18.133 0.217 17.080 3.673 0.959 1.994 HAV 6RD 54 6RD HAW H22 H 0 1 N N N 16.984 1.548 17.444 3.782 -0.721 2.573 HAW 6RD 55 6RD HAN H23 H 0 1 N N N 18.106 -2.346 16.273 4.620 2.435 -0.058 HAN 6RD 56 6RD HAG H24 H 0 1 N N N 17.573 -4.768 16.323 6.215 3.684 -1.426 HAG 6RD 57 6RD HAE H25 H 0 1 N N N 15.329 -5.597 16.790 8.482 2.812 -1.806 HAE 6RD 58 6RD HAL H26 H 0 1 N N N 13.563 -3.990 17.455 9.178 0.676 -0.820 HAL 6RD 59 6RD HBI H27 H 0 1 N N N 13.104 -1.224 17.822 8.159 -1.442 0.834 HBI 6RD 60 6RD HAO H28 H 0 1 N N N 14.478 0.975 17.659 5.990 -2.013 2.041 HAO 6RD 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6RD CAA NBH SING N N 1 6RD CAJ CAG DOUB Y N 2 6RD CAJ CBC SING Y N 3 6RD CAI CBC DOUB Y N 4 6RD CAI CAC SING Y N 5 6RD CAG CAH SING Y N 6 6RD CBC CBE SING Y N 7 6RD CAC CAE DOUB Y N 8 6RD CAH CAX DOUB Y N 9 6RD NAT NBH SING Y N 10 6RD NAT CBA DOUB Y N 11 6RD NBH CBB SING Y N 12 6RD CBE CAX SING Y N 13 6RD CBE CAL DOUB Y N 14 6RD CAE CAL SING Y N 15 6RD CAX CAQ SING N N 16 6RD NAU CAQ SING N N 17 6RD NAU CAW SING N N 18 6RD CBA CAW SING N N 19 6RD CBA CAZ SING Y N 20 6RD CBB CAO SING N N 21 6RD CBB CAZ DOUB Y N 22 6RD CAW OAB DOUB N N 23 6RD CAO CAP SING N N 24 6RD CAZ CAS SING N N 25 6RD CAP NBG SING N N 26 6RD CAS NBG SING N N 27 6RD NBG CAR SING N N 28 6RD CAM CAF DOUB Y N 29 6RD CAM CBF SING Y N 30 6RD CAF CAD SING Y N 31 6RD CAR CAY SING N N 32 6RD CAD CAK DOUB Y N 33 6RD CBF CAY SING Y N 34 6RD CBF CBD DOUB Y N 35 6RD CAY CAN DOUB Y N 36 6RD CAK CBD SING Y N 37 6RD CBD NAV SING Y N 38 6RD CAN NAV SING Y N 39 6RD CAH HAI SING N N 40 6RD CAG HAH SING N N 41 6RD CAJ HAK SING N N 42 6RD CAI HAJ SING N N 43 6RD CAC HAD SING N N 44 6RD CAE HAF SING N N 45 6RD CAL HAM SING N N 46 6RD CAQ HAT SING N N 47 6RD CAQ HAU SING N N 48 6RD NAU HBH SING N N 49 6RD CAS HAX SING N N 50 6RD CAS HAY SING N N 51 6RD CAA HAB SING N N 52 6RD CAA HAC SING N N 53 6RD CAA HAA SING N N 54 6RD CAO HAP SING N N 55 6RD CAO HAQ SING N N 56 6RD CAP HAS SING N N 57 6RD CAP HAR SING N N 58 6RD CAR HAV SING N N 59 6RD CAR HAW SING N N 60 6RD CAM HAN SING N N 61 6RD CAF HAG SING N N 62 6RD CAD HAE SING N N 63 6RD CAK HAL SING N N 64 6RD NAV HBI SING N N 65 6RD CAN HAO SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6RD InChI InChI 1.03 "InChI=1S/C28H27N5O/c1-32-26-13-14-33(17-21-16-29-25-12-5-4-11-23(21)25)18-24(26)27(31-32)28(34)30-15-20-9-6-8-19-7-2-3-10-22(19)20/h2-12,16,29H,13-15,17-18H2,1H3,(H,30,34)" 6RD InChIKey InChI 1.03 XJVZXIUKPNWOSD-UHFFFAOYSA-N 6RD SMILES_CANONICAL CACTVS 3.385 "Cn1nc(C(=O)NCc2cccc3ccccc23)c4CN(CCc14)Cc5c[nH]c6ccccc56" 6RD SMILES CACTVS 3.385 "Cn1nc(C(=O)NCc2cccc3ccccc23)c4CN(CCc14)Cc5c[nH]c6ccccc56" 6RD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "Cn1c2c(c(n1)C(=O)NCc3cccc4c3cccc4)CN(CC2)Cc5c[nH]c6c5cccc6" 6RD SMILES "OpenEye OEToolkits" 2.0.5 "Cn1c2c(c(n1)C(=O)NCc3cccc4c3cccc4)CN(CC2)Cc5c[nH]c6c5cccc6" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 6RD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.5 "5-(1~{H}-indol-3-ylmethyl)-1-methyl-~{N}-(naphthalen-1-ylmethyl)-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridine-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6RD "Create component" 2016-06-07 EBI 6RD "Initial release" 2017-03-08 RCSB #