data_6SZ # _chem_comp.id 6SZ _chem_comp.name "2-Aminopurine riboside-3',5'-cyclic monophosphate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H12 N5 O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 2-NH2-cPuMP _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-06-16 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 329.206 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6SZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5KHK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6SZ N1 N1 N 0 1 Y N N 12.042 2.575 54.378 -5.515 -0.283 -0.430 N1 6SZ 1 6SZ N2 N2 N 0 1 N N N 12.352 1.384 56.382 -5.253 -2.443 0.422 N2 6SZ 2 6SZ C6 C1 C 0 1 Y N N 12.533 3.413 53.272 -5.059 0.918 -0.743 C6 6SZ 3 6SZ C2 C2 C 0 1 Y N N 12.844 2.158 55.393 -4.724 -1.200 0.113 C2 6SZ 4 6SZ N3 N3 N 0 1 Y N N 14.147 2.463 55.493 -3.447 -0.967 0.369 N3 6SZ 5 6SZ C4 C3 C 0 1 Y N N 14.703 3.209 54.551 -2.910 0.212 0.086 C4 6SZ 6 6SZ C5 C4 C 0 1 Y N N 13.944 3.714 53.430 -3.718 1.213 -0.491 C5 6SZ 7 6SZ N7 N4 N 0 1 Y N N 14.774 4.454 52.681 -2.931 2.302 -0.675 N7 6SZ 8 6SZ C8 C5 C 0 1 Y N N 15.990 4.398 53.287 -1.727 2.042 -0.259 C8 6SZ 9 6SZ N9 N5 N 0 1 Y N N 15.906 3.640 54.388 -1.662 0.766 0.219 N9 6SZ 10 6SZ "C1'" C6 C 0 1 N N R 16.908 3.312 55.381 -0.476 0.108 0.773 "C1'" 6SZ 11 6SZ "O4'" O1 O 0 1 N N N 17.493 4.530 55.773 0.458 1.102 1.260 "O4'" 6SZ 12 6SZ "C2'" C7 C 0 1 N N R 17.937 2.464 54.721 0.249 -0.695 -0.336 "C2'" 6SZ 13 6SZ "O2'" O2 O 0 1 N N N 18.405 1.556 55.702 0.378 -2.068 0.038 "O2'" 6SZ 14 6SZ "C3'" C8 C 0 1 N N S 18.955 3.474 54.354 1.626 -0.024 -0.415 "C3'" 6SZ 15 6SZ "O3'" O3 O 0 1 N N N 20.238 2.981 54.251 2.722 -0.929 -0.578 "O3'" 6SZ 16 6SZ PA P1 P 0 1 N N N 21.209 4.264 54.063 4.217 -0.312 -0.364 PA 6SZ 17 6SZ O2A O4 O 0 1 N N N 20.571 4.949 52.900 4.659 0.381 -1.595 O2A 6SZ 18 6SZ O1A O5 O 0 1 N N N 22.627 3.853 54.092 5.251 -1.489 0.005 O1A 6SZ 19 6SZ "C4'" C9 C 0 1 N N R 18.875 4.361 55.562 1.753 0.557 1.019 "C4'" 6SZ 20 6SZ "C5'" C10 C 0 1 N N N 19.638 5.636 55.481 2.916 1.528 1.058 "C5'" 6SZ 21 6SZ "O5'" O6 O 0 1 N N N 20.966 5.173 55.342 4.119 0.745 0.864 "O5'" 6SZ 22 6SZ H1 H1 H 0 1 N N N 11.381 1.209 56.217 -6.187 -2.631 0.240 H1 6SZ 23 6SZ H2 H2 H 0 1 N N N 12.848 0.516 56.404 -4.689 -3.125 0.819 H2 6SZ 24 6SZ H3 H3 H 0 1 N N N 11.923 3.759 52.450 -5.712 1.656 -1.184 H3 6SZ 25 6SZ H4 H4 H 0 1 N N N 16.885 4.889 52.935 -0.899 2.735 -0.289 H4 6SZ 26 6SZ H5 H5 H 0 1 N N N 16.461 2.781 56.234 -0.767 -0.557 1.586 H5 6SZ 27 6SZ H6 H6 H 0 1 N N N 17.532 1.956 53.833 -0.281 -0.605 -1.285 H6 6SZ 28 6SZ H7 H7 H 0 1 N N N 17.721 0.929 55.906 -0.466 -2.521 0.172 H7 6SZ 29 6SZ H8 H8 H 0 1 N N N 18.647 4.025 53.453 1.638 0.765 -1.167 H8 6SZ 30 6SZ H9 H9 H 0 1 N N N 23.043 4.092 53.272 6.159 -1.186 0.144 H9 6SZ 31 6SZ H10 H10 H 0 1 N N N 19.284 3.790 56.409 1.944 -0.253 1.724 H10 6SZ 32 6SZ H11 H11 H 0 1 N N N 19.516 6.234 56.396 2.816 2.262 0.259 H11 6SZ 33 6SZ H12 H12 H 0 1 N N N 19.329 6.232 54.610 2.949 2.031 2.024 H12 6SZ 34 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6SZ N7 C8 DOUB Y N 1 6SZ N7 C5 SING Y N 2 6SZ O2A PA DOUB N N 3 6SZ C6 C5 DOUB Y N 4 6SZ C6 N1 SING Y N 5 6SZ C8 N9 SING Y N 6 6SZ C5 C4 SING Y N 7 6SZ PA O1A SING N N 8 6SZ PA "O3'" SING N N 9 6SZ PA "O5'" SING N N 10 6SZ "O3'" "C3'" SING N N 11 6SZ "C3'" "C2'" SING N N 12 6SZ "C3'" "C4'" SING N N 13 6SZ N1 C2 DOUB Y N 14 6SZ N9 C4 SING Y N 15 6SZ N9 "C1'" SING N N 16 6SZ C4 N3 DOUB Y N 17 6SZ "C2'" "C1'" SING N N 18 6SZ "C2'" "O2'" SING N N 19 6SZ "O5'" "C5'" SING N N 20 6SZ "C1'" "O4'" SING N N 21 6SZ C2 N3 SING Y N 22 6SZ C2 N2 SING N N 23 6SZ "C5'" "C4'" SING N N 24 6SZ "C4'" "O4'" SING N N 25 6SZ N2 H1 SING N N 26 6SZ N2 H2 SING N N 27 6SZ C6 H3 SING N N 28 6SZ C8 H4 SING N N 29 6SZ "C1'" H5 SING N N 30 6SZ "C2'" H6 SING N N 31 6SZ "O2'" H7 SING N N 32 6SZ "C3'" H8 SING N N 33 6SZ O1A H9 SING N N 34 6SZ "C4'" H10 SING N N 35 6SZ "C5'" H11 SING N N 36 6SZ "C5'" H12 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6SZ InChI InChI 1.03 "InChI=1S/C10H12N5O6P/c11-10-12-1-4-8(14-10)15(3-13-4)9-6(16)7-5(20-9)2-19-22(17,18)21-7/h1,3,5-7,9,16H,2H2,(H,17,18)(H2,11,12,14)/t5-,6-,7-,9-/m1/s1" 6SZ InChIKey InChI 1.03 ZZUVWWINFTZMGV-JXOAFFINSA-N 6SZ SMILES_CANONICAL CACTVS 3.385 "Nc1ncc2ncn([C@@H]3O[C@@H]4CO[P](O)(=O)O[C@H]4[C@H]3O)c2n1" 6SZ SMILES CACTVS 3.385 "Nc1ncc2ncn([CH]3O[CH]4CO[P](O)(=O)O[CH]4[CH]3O)c2n1" 6SZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "c1c2c(nc(n1)N)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)COP(=O)(O4)O)O" 6SZ SMILES "OpenEye OEToolkits" 2.0.5 "c1c2c(nc(n1)N)n(cn2)C3C(C4C(O3)COP(=O)(O4)O)O" # _pdbx_chem_comp_identifier.comp_id 6SZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.5 _pdbx_chem_comp_identifier.identifier "(4~{a}~{R},6~{R},7~{R},7~{a}~{S})-6-(2-azanylpurin-9-yl)-2-oxidanyl-2-oxidanylidene-4~{a},6,7,7~{a}-tetrahydro-4~{H}-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6SZ "Create component" 2016-06-16 RCSB 6SZ "Initial release" 2016-09-14 RCSB 6SZ "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 6SZ _pdbx_chem_comp_synonyms.name 2-NH2-cPuMP _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##