data_6W7 # _chem_comp.id 6W7 _chem_comp.name "[(3~{S},4~{R})-4-(6-oxidanylidene-1~{H}-purin-9-yl)pyrrolidin-3-yl]oxymethylphosphonic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H14 N5 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[3S,4R]-(4-(Hypoxanthin-9-yl)pyrrolidin-3-yl)-oxymethanephosphonic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-07-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 315.222 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 6W7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5KNP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 6W7 C4 C1 C 0 1 Y N N -34.927 14.593 -26.378 1.767 0.316 -0.469 C4 6W7 1 6W7 C5 C2 C 0 1 Y N N -35.326 15.537 -27.279 2.607 0.028 0.612 C5 6W7 2 6W7 C6 C3 C 0 1 N N N -35.938 15.150 -28.413 3.706 -0.841 0.399 C6 6W7 3 6W7 C8 C4 C 0 1 Y N N -34.358 16.504 -25.527 1.068 1.371 1.333 C8 6W7 4 6W7 N1 N1 N 0 1 N N N -36.151 13.837 -28.647 3.888 -1.348 -0.841 N1 6W7 5 6W7 N3 N2 N 0 1 N N N -35.123 13.319 -26.586 2.023 -0.226 -1.668 N3 6W7 6 6W7 OAC O1 O 0 1 N N N -31.218 18.666 -22.563 -3.671 -2.813 0.327 OAC 6W7 7 6W7 PAU P1 P 0 1 N N N -30.135 17.672 -22.896 -2.462 -1.789 0.038 PAU 6W7 8 6W7 OAD O2 O 0 1 N N N -28.925 18.406 -23.415 -1.171 -2.504 0.154 OAD 6W7 9 6W7 OAB O3 O 0 1 N N N -29.762 16.893 -21.649 -2.611 -1.190 -1.449 OAB 6W7 10 6W7 CAI C5 C 0 1 N N N -30.745 16.503 -24.187 -2.515 -0.428 1.250 CAI 6W7 11 6W7 OAN O4 O 0 1 N N N -32.116 16.157 -23.901 -1.443 0.481 0.993 OAN 6W7 12 6W7 CAR C6 C 0 1 N N S -32.403 14.771 -23.951 -1.652 1.319 -0.146 CAR 6W7 13 6W7 CAG C7 C 0 1 N N N -32.140 14.198 -22.548 -2.333 2.638 0.277 CAG 6W7 14 6W7 NAL N3 N 0 1 N N N -33.589 14.299 -21.894 -1.708 3.675 -0.584 NAL 6W7 15 6W7 CAH C8 C 0 1 N N N -34.510 14.887 -22.984 -0.277 3.283 -0.647 CAH 6W7 16 6W7 CAS C9 C 0 1 N N R -33.818 14.518 -24.217 -0.299 1.743 -0.754 CAS 6W7 17 6W7 N9 N4 N 0 1 Y N N -34.369 15.240 -25.394 0.807 1.164 0.012 N9 6W7 18 6W7 C2 C10 C 0 1 N N N -35.742 12.890 -27.726 3.036 -1.026 -1.846 C2 6W7 19 6W7 O6 O5 O 0 1 N N N -36.356 16.113 -29.354 4.467 -1.123 1.309 O6 6W7 20 6W7 N7 N5 N 0 1 Y N N -34.956 16.779 -26.732 2.128 0.701 1.684 N7 6W7 21 6W7 H1 H1 H 0 1 N N N -33.956 17.222 -24.828 0.484 1.998 1.991 H1 6W7 22 6W7 H2 H2 H 0 1 N N N -36.606 13.549 -29.489 4.633 -1.945 -1.013 H2 6W7 23 6W7 H3 H3 H 0 1 N N N -30.910 19.545 -22.750 -3.704 -3.564 -0.281 H3 6W7 24 6W7 H4 H4 H 0 1 N N N -28.842 17.029 -21.453 -3.436 -0.707 -1.598 H4 6W7 25 6W7 H5 H5 H 0 1 N N N -30.127 15.593 -24.182 -3.466 0.098 1.164 H5 6W7 26 6W7 H6 H6 H 0 1 N N N -30.684 16.982 -25.176 -2.414 -0.834 2.256 H6 6W7 27 6W7 H7 H7 H 0 1 N N N -31.769 14.255 -24.687 -2.257 0.802 -0.890 H7 6W7 28 6W7 H8 H8 H 0 1 N N N -31.792 13.156 -22.597 -3.406 2.588 0.094 H8 6W7 29 6W7 H9 H9 H 0 1 N N N -31.406 14.804 -21.997 -2.135 2.848 1.329 H9 6W7 30 6W7 H10 H10 H 0 1 N N N -33.568 14.901 -21.095 -1.814 4.593 -0.179 H10 6W7 31 6W7 H12 H12 H 0 1 N N N -34.593 15.980 -22.887 0.198 3.718 -1.526 H12 6W7 32 6W7 H13 H13 H 0 1 N N N -35.513 14.438 -22.942 0.243 3.596 0.259 H13 6W7 33 6W7 H14 H14 H 0 1 N N N -33.954 13.439 -24.383 -0.240 1.435 -1.798 H14 6W7 34 6W7 H15 H15 H 0 1 N N N -35.908 11.838 -27.903 3.204 -1.445 -2.828 H15 6W7 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 6W7 O6 C6 DOUB N N 1 6W7 N1 C6 SING N N 2 6W7 N1 C2 SING N N 3 6W7 C6 C5 SING N N 4 6W7 C2 N3 DOUB N N 5 6W7 C5 N7 SING Y N 6 6W7 C5 C4 DOUB Y N 7 6W7 N7 C8 DOUB Y N 8 6W7 N3 C4 SING N N 9 6W7 C4 N9 SING Y N 10 6W7 C8 N9 SING Y N 11 6W7 N9 CAS SING N N 12 6W7 CAS CAR SING N N 13 6W7 CAS CAH SING N N 14 6W7 CAI OAN SING N N 15 6W7 CAI PAU SING N N 16 6W7 CAR OAN SING N N 17 6W7 CAR CAG SING N N 18 6W7 OAD PAU DOUB N N 19 6W7 CAH NAL SING N N 20 6W7 PAU OAC SING N N 21 6W7 PAU OAB SING N N 22 6W7 CAG NAL SING N N 23 6W7 C8 H1 SING N N 24 6W7 N1 H2 SING N N 25 6W7 OAC H3 SING N N 26 6W7 OAB H4 SING N N 27 6W7 CAI H5 SING N N 28 6W7 CAI H6 SING N N 29 6W7 CAR H7 SING N N 30 6W7 CAG H8 SING N N 31 6W7 CAG H9 SING N N 32 6W7 NAL H10 SING N N 33 6W7 CAH H12 SING N N 34 6W7 CAH H13 SING N N 35 6W7 CAS H14 SING N N 36 6W7 C2 H15 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 6W7 InChI InChI 1.03 "InChI=1S/C10H14N5O5P/c16-10-8-9(12-3-13-10)15(4-14-8)6-1-11-2-7(6)20-5-21(17,18)19/h3-4,6-7,11H,1-2,5H2,(H,12,13,16)(H2,17,18,19)/t6-,7+/m1/s1" 6W7 InChIKey InChI 1.03 YFBRPISOXMPUHB-RQJHMYQMSA-N 6W7 SMILES_CANONICAL CACTVS 3.385 "O[P](O)(=O)CO[C@H]1CNC[C@H]1n2cnc3C(=O)NC=Nc23" 6W7 SMILES CACTVS 3.385 "O[P](O)(=O)CO[CH]1CNC[CH]1n2cnc3C(=O)NC=Nc23" 6W7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.5 "c1nc2c(n1[C@@H]3CNC[C@@H]3OCP(=O)(O)O)N=CNC2=O" 6W7 SMILES "OpenEye OEToolkits" 2.0.5 "c1nc2c(n1C3CNCC3OCP(=O)(O)O)N=CNC2=O" # _pdbx_chem_comp_identifier.comp_id 6W7 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.5 _pdbx_chem_comp_identifier.identifier "[(3~{S},4~{R})-4-(6-oxidanylidene-1~{H}-purin-9-yl)pyrrolidin-3-yl]oxymethylphosphonic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 6W7 "Create component" 2016-07-08 RCSB 6W7 "Modify synonyms" 2016-07-18 RCSB 6W7 "Initial release" 2017-09-20 RCSB 6W7 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 6W7 _pdbx_chem_comp_synonyms.name "[3S,4R]-(4-(Hypoxanthin-9-yl)pyrrolidin-3-yl)-oxymethanephosphonic acid" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##