data_74W # _chem_comp.id 74W _chem_comp.name "1-[4-chloranyl-3-(trifluoromethyl)phenyl]-3-[[(2R,3S)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]thiourea" _chem_comp.type non-polymer _chem_comp.pdbx_type ? _chem_comp.formula "C18 H18 Cl F3 N4 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(THIO)UREA-BETA-DEOXYTHYMIDINE DERIVATIVE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-10-24 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 478.873 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 74W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2YOF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 74W OAC OAC O 0 1 N N N 58.788 46.048 30.338 4.091 0.706 1.513 OAC 74W 1 74W CAZ CAZ C 0 1 N N N 58.866 45.612 29.181 4.987 0.954 0.729 CAZ 74W 2 74W NAR NAR N 0 1 N N N 59.813 44.678 28.878 5.679 2.102 0.855 NAR 74W 3 74W CAY CAY C 0 1 N N N 59.924 44.152 27.579 6.675 2.392 -0.006 CAY 74W 4 74W OAB OAB O 0 1 N N N 60.789 43.304 27.374 7.302 3.430 0.106 OAB 74W 5 74W CAU CAU C 0 1 N N N 59.058 44.561 26.559 6.987 1.479 -1.042 CAU 74W 6 74W CAA CAA C 0 1 N N N 59.179 43.949 25.117 8.096 1.779 -2.017 CAA 74W 7 74W CAM CAM C 0 1 N N N 58.074 45.505 26.854 6.277 0.334 -1.144 CAM 74W 8 74W NBD NBD N 0 1 N N N 57.988 46.045 28.185 5.277 0.075 -0.247 NBD 74W 9 74W CBC CBC C 0 1 N N R 56.969 47.011 28.531 4.510 -1.169 -0.355 CBC 74W 10 74W OAS OAS O 0 1 N N N 55.753 46.233 28.360 3.095 -0.884 -0.411 OAS 74W 11 74W CAO CAO C 0 1 N N N 56.831 48.185 27.595 4.690 -2.023 0.919 CAO 74W 12 74W CBA CBA C 0 1 N N S 55.357 48.523 27.782 3.300 -2.658 1.145 CBA 74W 13 74W OAD OAD O 0 1 N N N 55.175 49.439 28.907 3.384 -4.083 1.079 OAD 74W 14 74W CBB CBB C 0 1 N N R 54.697 47.153 28.070 2.444 -2.112 -0.019 CBB 74W 15 74W CAN CAN C 0 1 N N N 53.925 46.641 26.805 1.017 -1.830 0.455 CAN 74W 16 74W NAP NAP N 0 1 N N N 52.875 47.635 26.488 0.212 -1.355 -0.673 NAP 74W 17 74W CAT CAT C 0 1 N N N 51.889 47.413 25.614 -1.086 -1.042 -0.490 CAT 74W 18 74W SAE SAE S 0 1 N N N 51.786 45.875 24.805 -1.794 -1.200 1.061 SAE 74W 19 74W NAQ NAQ N 0 1 N N N 50.981 48.395 25.437 -1.826 -0.605 -1.528 NAQ 74W 20 74W CAV CAV C 0 1 Y N N 49.937 48.349 24.603 -3.195 -0.365 -1.359 CAV 74W 21 74W CAL CAL C 0 1 Y N N 49.371 47.149 24.169 -3.646 0.333 -0.246 CAL 74W 22 74W CAJ CAJ C 0 1 Y N N 49.410 49.561 24.159 -4.102 -0.819 -2.306 CAJ 74W 23 74W CAK CAK C 0 1 Y N N 48.327 49.592 23.293 -5.452 -0.580 -2.138 CAK 74W 24 74W CAW CAW C 0 1 Y N N 47.763 48.402 22.864 -5.900 0.111 -1.026 CAW 74W 25 74W CL CL CL 0 0 N N N 46.412 48.403 21.777 -7.598 0.410 -0.817 CL 74W 26 74W CAX CAX C 0 1 Y N N 48.277 47.185 23.298 -4.997 0.569 -0.083 CAX 74W 27 74W CBE CBE C 0 1 N N N 47.609 45.901 22.786 -5.488 1.327 1.124 CBE 74W 28 74W FAF FAF F 0 1 N N N 46.328 45.896 23.164 -6.362 0.518 1.858 FAF 74W 29 74W FAG FAG F 0 1 N N N 47.649 45.888 21.451 -4.398 1.683 1.926 FAG 74W 30 74W FAH FAH F 0 1 N N N 48.246 44.837 23.283 -6.159 2.482 0.709 FAH 74W 31 74W HAR HAR H 0 1 N N N 60.438 44.362 29.592 5.460 2.723 1.567 HAR 74W 32 74W HAA1 HAA1 H 0 0 N N N 58.415 44.396 24.463 8.546 2.741 -1.771 HAA1 74W 33 74W HAA2 HAA2 H 0 0 N N N 60.179 44.162 24.711 8.854 0.998 -1.957 HAA2 74W 34 74W HAA3 HAA3 H 0 0 N N N 59.028 42.861 25.167 7.691 1.815 -3.028 HAA3 74W 35 74W HAM HAM H 0 1 N N N 57.383 45.828 26.090 6.501 -0.375 -1.928 HAM 74W 36 74W HBC HBC H 0 1 N N N 57.079 47.357 29.569 4.820 -1.729 -1.237 HBC 74W 37 74W HAO1 HAO1 H 0 0 N N N 57.480 49.021 27.895 5.442 -2.797 0.757 HAO1 74W 38 74W HAO2 HAO2 H 0 0 N N N 57.054 47.903 26.555 4.965 -1.394 1.765 HAO2 74W 39 74W HBB HBB H 0 1 N N N 53.999 47.246 28.915 2.437 -2.819 -0.849 HBB 74W 40 74W HBA HBA H 0 1 N N N 54.945 48.949 26.855 2.888 -2.345 2.104 HBA 74W 41 74W HAD HAD H 0 1 N N N 54.252 49.638 29.008 3.958 -4.475 1.751 HAD 74W 42 74W HAN1 HAN1 H 0 0 N N N 54.618 46.544 25.956 0.580 -2.745 0.854 HAN1 74W 43 74W HAN2 HAN2 H 0 0 N N N 53.465 45.664 27.016 1.037 -1.068 1.234 HAN2 74W 44 74W HAP HAP H 0 1 N N N 52.905 48.520 26.953 0.614 -1.265 -1.551 HAP 74W 45 74W HAQ HAQ H 0 1 N N N 51.099 49.229 25.976 -1.411 -0.457 -2.392 HAQ 74W 46 74W HAL HAL H 0 1 N N N 49.773 46.204 24.502 -2.942 0.691 0.490 HAL 74W 47 74W HAJ HAJ H 0 1 N N N 49.851 50.488 24.494 -3.753 -1.358 -3.174 HAJ 74W 48 74W HAK HAK H 0 1 N N N 47.927 50.537 22.956 -6.159 -0.933 -2.874 HAK 74W 49 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 74W OAC CAZ DOUB N N 1 74W CAZ NAR SING N N 2 74W CAZ NBD SING N N 3 74W NAR CAY SING N N 4 74W CAY OAB DOUB N N 5 74W CAY CAU SING N N 6 74W CAU CAA SING N N 7 74W CAU CAM DOUB N N 8 74W CAM NBD SING N N 9 74W NBD CBC SING N N 10 74W CBC OAS SING N N 11 74W CBC CAO SING N N 12 74W OAS CBB SING N N 13 74W CAO CBA SING N N 14 74W CBA OAD SING N N 15 74W CBA CBB SING N N 16 74W CBB CAN SING N N 17 74W CAN NAP SING N N 18 74W NAP CAT SING N N 19 74W CAT SAE DOUB N N 20 74W CAT NAQ SING N N 21 74W NAQ CAV SING N N 22 74W CAV CAL SING Y N 23 74W CAV CAJ DOUB Y N 24 74W CAL CAX DOUB Y N 25 74W CAJ CAK SING Y N 26 74W CAK CAW DOUB Y N 27 74W CAW CL SING N N 28 74W CAW CAX SING Y N 29 74W CAX CBE SING N N 30 74W CBE FAG SING N N 31 74W CBE FAH SING N N 32 74W CBE FAF SING N N 33 74W NAR HAR SING N N 34 74W CAA HAA1 SING N N 35 74W CAA HAA2 SING N N 36 74W CAA HAA3 SING N N 37 74W CAM HAM SING N N 38 74W CBC HBC SING N N 39 74W CAO HAO1 SING N N 40 74W CAO HAO2 SING N N 41 74W CBB HBB SING N N 42 74W CBA HBA SING N N 43 74W OAD HAD SING N N 44 74W CAN HAN1 SING N N 45 74W CAN HAN2 SING N N 46 74W NAP HAP SING N N 47 74W NAQ HAQ SING N N 48 74W CAL HAL SING N N 49 74W CAJ HAJ SING N N 50 74W CAK HAK SING N N 51 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 74W SMILES ACDLabs 12.01 "FC(F)(F)c1cc(ccc1Cl)NC(=S)NCC3OC(N2C(=O)NC(=O)C(=C2)C)CC3O" 74W InChI InChI 1.03 "InChI=1S/C18H18ClF3N4O4S/c1-8-7-26(17(29)25-15(8)28)14-5-12(27)13(30-14)6-23-16(31)24-9-2-3-11(19)10(4-9)18(20,21)22/h2-4,7,12-14,27H,5-6H2,1H3,(H2,23,24,31)(H,25,28,29)/t12-,13+,14+/m0/s1" 74W InChIKey InChI 1.03 IJDGQXGQAWBJEG-BFHYXJOUSA-N 74W SMILES_CANONICAL CACTVS 3.385 "CC1=CN([C@H]2C[C@H](O)[C@@H](CNC(=S)Nc3ccc(Cl)c(c3)C(F)(F)F)O2)C(=O)NC1=O" 74W SMILES CACTVS 3.385 "CC1=CN([CH]2C[CH](O)[CH](CNC(=S)Nc3ccc(Cl)c(c3)C(F)(F)F)O2)C(=O)NC1=O" 74W SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)CNC(=S)Nc3ccc(c(c3)C(F)(F)F)Cl)O" 74W SMILES "OpenEye OEToolkits" 1.9.2 "CC1=CN(C(=O)NC1=O)C2CC(C(O2)CNC(=S)Nc3ccc(c(c3)C(F)(F)F)Cl)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 74W "SYSTEMATIC NAME" ACDLabs 12.01 "5'-({[4-chloro-3-(trifluoromethyl)phenyl]carbamothioyl}amino)-2',5'-dideoxy-3,4-dihydrothymidine" 74W "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1-[4-chloranyl-3-(trifluoromethyl)phenyl]-3-[[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methyl]thiourea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 74W "Create component" 2012-10-24 EBI 74W "Initial release" 2013-07-24 RCSB 74W "Modify descriptor" 2014-09-05 RCSB 74W "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 74W _pdbx_chem_comp_synonyms.name "(THIO)UREA-BETA-DEOXYTHYMIDINE DERIVATIVE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##