data_779 # _chem_comp.id 779 _chem_comp.name "1-[(1R,3S)-3-{[(2E,4R)-4-(2-cyclohexylethyl)-2-imino-1-methyl-5-oxoimidazolidin-4-yl]methyl}cyclohexyl]-3-phenylurea" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H39 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-09-08 _chem_comp.pdbx_modified_date 2020-05-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 453.620 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 779 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4R93 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 779 C1 C1 C 0 1 N N N 21.296 11.919 23.109 -2.315 -0.365 1.006 C1 779 1 779 C2 C2 C 0 1 N N R 20.888 10.799 22.168 -2.509 -0.148 -0.479 C2 779 2 779 N3 N3 N 0 1 N N N 21.434 9.626 22.843 -2.653 -1.505 -1.031 N3 779 3 779 C4 C4 C 0 1 N N N 22.073 9.981 24.006 -2.550 -2.372 0.028 C4 779 4 779 N5 N5 N 0 1 N N N 21.982 11.341 24.149 -2.353 -1.695 1.207 N5 779 5 779 O6 O6 O 0 1 N N N 21.013 13.101 22.965 -2.151 0.492 1.848 O6 779 6 779 C7 C7 C 0 1 N N N 19.365 10.681 22.097 -3.774 0.672 -0.739 C7 779 7 779 C8 C8 C 0 1 N N S 22.963 11.073 20.614 -0.017 -0.195 -0.660 C8 779 8 779 C9 C9 C 0 1 N N N 18.653 10.596 23.456 -4.973 -0.020 -0.088 C9 779 9 779 C10 C10 C 0 1 N N N 17.180 10.189 23.382 -6.239 0.800 -0.347 C10 779 10 779 C11 C11 C 0 1 N N N 23.371 11.970 19.445 1.210 0.629 -1.054 C11 779 11 779 C12 C12 C 0 1 N N R 24.893 12.028 19.276 2.480 -0.113 -0.631 C12 779 12 779 C13 C13 C 0 1 N N N 25.527 10.638 19.201 2.532 -1.473 -1.330 C13 779 13 779 C14 C14 C 0 1 N N N 25.082 9.756 20.364 1.304 -2.297 -0.936 C14 779 14 779 C15 C15 C 0 1 N N N 23.558 9.670 20.459 0.035 -1.555 -1.359 C15 779 15 779 C16 C16 C 0 1 N N N 16.670 9.942 24.795 -7.455 0.046 0.195 C16 779 16 779 C17 C17 C 0 1 N N N 15.210 9.487 24.832 -8.720 0.867 -0.065 C17 779 17 779 C18 C18 C 0 1 N N N 14.314 10.465 24.096 -8.604 2.220 0.639 C18 779 18 779 C19 C19 C 0 1 N N N 14.835 10.786 22.699 -7.387 2.974 0.097 C19 779 19 779 C20 C20 C 0 1 N N N 16.298 11.226 22.691 -6.122 2.154 0.356 C20 779 20 779 N21 N21 N 0 1 N N N 22.679 9.198 24.838 -2.629 -3.667 -0.072 N21 779 21 779 N22 N22 N 0 1 N N N 25.292 12.811 18.122 3.655 0.675 -1.009 N22 779 22 779 C23 C23 C 0 1 N N N 25.830 14.077 18.297 4.814 0.520 -0.338 C23 779 23 779 C24 C24 C 0 1 N N N 21.444 11.000 20.751 -1.287 0.547 -1.083 C24 779 24 779 C25 C25 C 0 1 N N N 22.563 12.116 25.236 -2.204 -2.339 2.515 C25 779 25 779 O26 O26 O 0 1 N N N 25.847 14.652 19.381 4.884 -0.274 0.579 O26 779 26 779 N27 N27 N 0 1 N N N 26.302 14.598 17.117 5.896 1.246 -0.686 N27 779 27 779 C28 C28 C 0 1 Y N N 26.772 15.916 16.894 7.127 1.006 -0.066 C28 779 28 779 C29 C29 C 0 1 Y N N 27.208 16.223 15.619 8.016 2.053 0.144 C29 779 29 779 C30 C30 C 0 1 Y N N 27.678 17.495 15.332 9.230 1.813 0.756 C30 779 30 779 C31 C31 C 0 1 Y N N 27.696 18.467 16.316 9.562 0.533 1.160 C31 779 31 779 C32 C32 C 0 1 Y N N 27.259 18.171 17.591 8.680 -0.512 0.951 C32 779 32 779 C33 C33 C 0 1 Y N N 26.806 16.895 17.881 7.461 -0.277 0.345 C33 779 33 779 H1 H1 H 0 1 N N N 18.979 11.563 21.565 -3.655 1.669 -0.313 H1 779 34 779 H2 H2 H 0 1 N N N 19.120 9.773 21.527 -3.941 0.753 -1.813 H2 779 35 779 H3 H3 H 0 1 N N N 23.367 11.513 21.537 -0.025 -0.342 0.420 H3 779 36 779 H4 H4 H 0 1 N N N 19.182 9.856 24.074 -5.093 -1.017 -0.513 H4 779 37 779 H5 H5 H 0 1 N N N 18.712 11.584 23.936 -4.807 -0.101 0.986 H5 779 38 779 H6 H6 H 0 1 N N N 17.111 9.246 22.819 -6.357 0.956 -1.420 H6 779 39 779 H7 H7 H 0 1 N N N 22.994 12.987 19.628 1.218 0.775 -2.134 H7 779 40 779 H8 H8 H 0 1 N N N 22.925 11.575 18.520 1.173 1.598 -0.556 H8 779 41 779 H9 H9 H 0 1 N N N 25.297 12.518 20.174 2.472 -0.260 0.449 H9 779 42 779 H10 H10 H 0 1 N N N 25.229 10.160 18.256 2.540 -1.327 -2.410 H10 779 43 779 H11 H11 H 0 1 N N N 26.622 10.743 19.230 3.436 -2.002 -1.029 H11 779 44 779 H12 H12 H 0 1 N N N 25.488 8.744 20.219 1.342 -3.266 -1.434 H12 779 45 779 H13 H13 H 0 1 N N N 25.474 10.178 21.301 1.297 -2.444 0.144 H13 779 46 779 H14 H14 H 0 1 N N N 23.162 9.205 19.544 -0.840 -2.142 -1.078 H14 779 47 779 H15 H15 H 0 1 N N N 23.281 9.059 21.331 0.043 -1.408 -2.439 H15 779 48 779 H16 H16 H 0 1 N N N 17.292 9.163 25.261 -7.538 -0.918 -0.306 H16 779 49 779 H17 H17 H 0 1 N N N 16.761 10.876 25.369 -7.337 -0.110 1.267 H17 779 50 779 H18 H18 H 0 1 N N N 14.882 9.418 25.880 -8.838 1.023 -1.137 H18 779 51 779 H19 H19 H 0 1 N N N 15.130 8.498 24.356 -9.587 0.330 0.322 H19 779 52 779 H20 H20 H 0 1 N N N 14.257 11.398 24.676 -9.505 2.805 0.454 H20 779 53 779 H21 H21 H 0 1 N N N 13.309 10.027 24.007 -8.486 2.064 1.711 H21 779 54 779 H22 H22 H 0 1 N N N 14.224 11.596 22.275 -7.505 3.130 -0.976 H22 779 55 779 H23 H23 H 0 1 N N N 14.737 9.887 22.074 -7.304 3.938 0.598 H23 779 56 779 H24 H24 H 0 1 N N N 16.632 11.348 21.650 -6.004 1.997 1.428 H24 779 57 779 H25 H25 H 0 1 N N N 16.389 12.186 23.220 -5.256 2.690 -0.030 H25 779 58 779 H26 H26 H 0 1 N N N 23.077 9.702 25.604 -2.548 -4.221 0.721 H26 779 59 779 H28 H28 H 0 1 N N N 25.179 12.438 17.201 3.599 1.309 -1.741 H28 779 60 779 H29 H29 H 0 1 N N N 21.029 11.941 20.360 -1.366 0.542 -2.170 H29 779 61 779 H30 H30 H 0 1 N N N 21.094 10.160 20.133 -1.242 1.576 -0.727 H30 779 62 779 H31 H31 H 0 1 N N N 23.059 11.438 25.946 -3.184 -2.447 2.980 H31 779 63 779 H32 H32 H 0 1 N N N 23.300 12.824 24.829 -1.752 -3.322 2.387 H32 779 64 779 H33 H33 H 0 1 N N N 21.769 12.672 25.755 -1.566 -1.725 3.151 H33 779 65 779 H34 H34 H 0 1 N N N 26.315 13.981 16.330 5.820 1.934 -1.365 H34 779 66 779 H35 H35 H 0 1 N N N 27.182 15.470 14.845 7.757 3.053 -0.171 H35 779 67 779 H36 H36 H 0 1 N N N 28.031 17.728 14.338 9.922 2.626 0.920 H36 779 68 779 H37 H37 H 0 1 N N N 28.053 19.460 16.086 10.513 0.348 1.638 H37 779 69 779 H38 H38 H 0 1 N N N 27.270 18.931 18.359 8.942 -1.510 1.267 H38 779 70 779 H39 H39 H 0 1 N N N 26.476 16.658 18.882 6.771 -1.093 0.187 H39 779 71 779 H40 H40 H 0 1 N N N 21.354 8.689 22.504 -2.794 -1.740 -1.962 H40 779 72 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 779 C30 C29 DOUB Y N 1 779 C30 C31 SING Y N 2 779 C29 C28 SING Y N 3 779 C31 C32 DOUB Y N 4 779 C28 N27 SING N N 5 779 C28 C33 DOUB Y N 6 779 N27 C23 SING N N 7 779 C32 C33 SING Y N 8 779 N22 C23 SING N N 9 779 N22 C12 SING N N 10 779 C23 O26 DOUB N N 11 779 C13 C12 SING N N 12 779 C13 C14 SING N N 13 779 C12 C11 SING N N 14 779 C11 C8 SING N N 15 779 C14 C15 SING N N 16 779 C15 C8 SING N N 17 779 C8 C24 SING N N 18 779 C24 C2 SING N N 19 779 C7 C2 SING N N 20 779 C7 C9 SING N N 21 779 C2 N3 SING N N 22 779 C2 C1 SING N N 23 779 C20 C19 SING N N 24 779 C20 C10 SING N N 25 779 C19 C18 SING N N 26 779 N3 C4 SING N N 27 779 O6 C1 DOUB N N 28 779 C1 N5 SING N N 29 779 C10 C9 SING N N 30 779 C10 C16 SING N N 31 779 C4 N5 SING N N 32 779 C4 N21 DOUB N N 33 779 C18 C17 SING N N 34 779 N5 C25 SING N N 35 779 C16 C17 SING N N 36 779 C7 H1 SING N N 37 779 C7 H2 SING N N 38 779 C8 H3 SING N N 39 779 C9 H4 SING N N 40 779 C9 H5 SING N N 41 779 C10 H6 SING N N 42 779 C11 H7 SING N N 43 779 C11 H8 SING N N 44 779 C12 H9 SING N N 45 779 C13 H10 SING N N 46 779 C13 H11 SING N N 47 779 C14 H12 SING N N 48 779 C14 H13 SING N N 49 779 C15 H14 SING N N 50 779 C15 H15 SING N N 51 779 C16 H16 SING N N 52 779 C16 H17 SING N N 53 779 C17 H18 SING N N 54 779 C17 H19 SING N N 55 779 C18 H20 SING N N 56 779 C18 H21 SING N N 57 779 C19 H22 SING N N 58 779 C19 H23 SING N N 59 779 C20 H24 SING N N 60 779 C20 H25 SING N N 61 779 N21 H26 SING N N 62 779 N22 H28 SING N N 63 779 C24 H29 SING N N 64 779 C24 H30 SING N N 65 779 C25 H31 SING N N 66 779 C25 H32 SING N N 67 779 C25 H33 SING N N 68 779 N27 H34 SING N N 69 779 C29 H35 SING N N 70 779 C30 H36 SING N N 71 779 C31 H37 SING N N 72 779 C32 H38 SING N N 73 779 C33 H39 SING N N 74 779 N3 H40 SING N N 75 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 779 SMILES ACDLabs 12.01 "O=C1N(C(=[N@H])NC1(CC3CCCC(NC(=O)Nc2ccccc2)C3)CCC4CCCCC4)C" 779 InChI InChI 1.03 "InChI=1S/C26H39N5O2/c1-31-23(32)26(30-24(31)27,16-15-19-9-4-2-5-10-19)18-20-11-8-14-22(17-20)29-25(33)28-21-12-6-3-7-13-21/h3,6-7,12-13,19-20,22H,2,4-5,8-11,14-18H2,1H3,(H2,27,30)(H2,28,29,33)/t20-,22+,26+/m0/s1" 779 InChIKey InChI 1.03 CVMRAJSOLFSMNH-UNIVCBNLSA-N 779 SMILES_CANONICAL CACTVS 3.385 "CN1C(=N)N[C@](CCC2CCCCC2)(C[C@H]3CCC[C@H](C3)NC(=O)Nc4ccccc4)C1=O" 779 SMILES CACTVS 3.385 "CN1C(=N)N[C](CCC2CCCCC2)(C[CH]3CCC[CH](C3)NC(=O)Nc4ccccc4)C1=O" 779 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "[H]/N=C/1\N[C@](C(=O)N1C)(CCC2CCCCC2)C[C@H]3CCC[C@H](C3)NC(=O)Nc4ccccc4" 779 SMILES "OpenEye OEToolkits" 1.7.6 "CN1C(=O)C(NC1=N)(CCC2CCCCC2)CC3CCCC(C3)NC(=O)Nc4ccccc4" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 779 "SYSTEMATIC NAME" ACDLabs 12.01 "1-[(1R,3S)-3-{[(2E,4R)-4-(2-cyclohexylethyl)-2-imino-1-methyl-5-oxoimidazolidin-4-yl]methyl}cyclohexyl]-3-phenylurea" 779 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[(1R,3S)-3-[[(4R)-2-azanylidene-4-(2-cyclohexylethyl)-1-methyl-5-oxidanylidene-imidazolidin-4-yl]methyl]cyclohexyl]-3-phenyl-urea" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 779 "Create component" 2014-09-08 RCSB 779 "Initial release" 2014-11-05 RCSB 779 "Other modification" 2020-05-27 RCSB ##