data_78N # _chem_comp.id 78N _chem_comp.name "(2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H34 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "7.8 MONOACYLGLYCEROL (2R)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-01-19 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 314.460 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 78N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4AFK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 78N O22 O22 O 0 1 N N N 1.966 13.273 52.142 9.659 2.048 0.490 O22 78N 1 78N C19 C19 C 0 1 N N N 3.403 13.273 52.089 8.773 0.941 0.665 C19 78N 2 78N C18 C18 C 0 1 N N R 3.926 14.512 51.351 7.408 1.280 0.062 C18 78N 3 78N O20 O20 O 0 1 N N N 5.022 15.098 52.065 7.539 1.439 -1.352 O20 78N 4 78N C17 C17 C 0 1 N N N 4.399 14.175 49.942 6.424 0.147 0.359 C17 78N 5 78N O16 O16 O 0 1 N N N 5.109 15.298 49.411 5.101 0.519 -0.110 O16 78N 6 78N C8 C8 C 0 1 N N N 5.117 15.566 47.976 4.115 -0.372 0.076 C8 78N 7 78N O15 O15 O 0 1 N N N 5.419 16.688 47.597 4.349 -1.429 0.613 O15 78N 8 78N C7 C7 C 0 1 N N N 4.757 14.482 46.979 2.715 -0.055 -0.385 C7 78N 9 78N C6 C6 C 0 1 N N N 4.933 14.967 45.539 1.791 -1.229 -0.055 C6 78N 10 78N C5 C5 C 0 1 N N N 4.791 13.814 44.544 0.371 -0.907 -0.523 C5 78N 11 78N C4 C4 C 0 1 N N N 3.336 13.394 44.339 -0.553 -2.081 -0.193 C4 78N 12 78N C3 C3 C 0 1 N N N 3.220 11.988 43.752 -1.974 -1.759 -0.661 C3 78N 13 78N C2 C2 C 0 1 N N N 1.828 11.806 43.197 -2.884 -2.915 -0.336 C2 78N 14 78N C1 C1 C 0 1 N N N 1.505 10.858 42.314 -3.994 -2.709 0.328 C1 78N 15 78N C9 C9 C 0 1 N N N 2.485 9.852 41.765 -4.447 -1.302 0.620 C9 78N 16 78N C10 C10 C 0 1 N N N 1.825 9.053 40.644 -5.883 -1.115 0.125 C10 78N 17 78N C11 C11 C 0 1 N N N 1.303 9.969 39.548 -6.343 0.314 0.421 C11 78N 18 78N C12 C12 C 0 1 N N N 0.578 9.201 38.445 -7.778 0.500 -0.073 C12 78N 19 78N C13 C13 C 0 1 N N N -0.925 9.479 38.466 -8.238 1.929 0.223 C13 78N 20 78N C15 C15 C 0 1 N N N -0.873 11.382 36.808 -10.134 3.545 0.025 C15 78N 21 78N C14 C14 C 0 1 N N N -1.434 10.009 37.128 -9.674 2.116 -0.272 C14 78N 22 78N H22 H22 H 0 1 N N N 1.666 12.498 52.602 10.545 1.903 0.849 H22 78N 23 78N H191 H191 H 0 0 N N N 3.801 13.271 53.115 9.183 0.064 0.166 H191 78N 24 78N H192 H192 H 0 0 N N N 3.743 12.370 51.562 8.658 0.733 1.729 H192 78N 25 78N H18 H18 H 0 1 N N N 3.105 15.240 51.276 7.037 2.207 0.499 H18 78N 26 78N H20 H20 H 0 1 N N N 5.334 15.863 51.595 7.865 0.650 -1.808 H20 78N 27 78N H171 H171 H 0 0 N N N 5.064 13.300 49.975 6.748 -0.760 -0.153 H171 78N 28 78N H172 H172 H 0 0 N N N 3.531 13.952 49.304 6.391 -0.034 1.433 H172 78N 29 78N H71 H71 H 0 1 N N N 5.409 13.612 47.146 2.360 0.841 0.124 H71 78N 30 78N H72 H72 H 0 1 N N N 3.708 14.189 47.132 2.717 0.115 -1.461 H72 78N 31 78N H61C H61C H 0 0 N N N 4.167 15.726 45.320 2.147 -2.125 -0.564 H61C 78N 32 78N H62C H62C H 0 0 N N N 5.933 15.413 45.431 1.790 -1.399 1.021 H62C 78N 33 78N H51C H51C H 0 0 N N N 5.207 14.130 43.576 0.015 -0.011 -0.014 H51C 78N 34 78N H52C H52C H 0 0 N N N 5.358 12.950 44.922 0.372 -0.737 -1.599 H52C 78N 35 78N H41C H41C H 0 0 N N N 2.820 13.416 45.310 -0.198 -2.977 -0.702 H41C 78N 36 78N H42C H42C H 0 0 N N N 2.855 14.106 43.652 -0.555 -2.251 0.883 H42C 78N 37 78N H31C H31C H 0 0 N N N 3.959 11.861 42.947 -2.329 -0.863 -0.152 H31C 78N 38 78N H32C H32C H 0 0 N N N 3.405 11.242 44.539 -1.972 -1.589 -1.738 H32C 78N 39 78N H2 H2 H 0 1 N N N 1.052 12.478 43.532 -2.621 -3.914 -0.652 H2 78N 40 78N H1 H1 H 0 1 N N N 0.481 10.809 41.973 -4.585 -3.547 0.666 H1 78N 41 78N H91C H91C H 0 0 N N N 3.367 10.378 41.370 -4.407 -1.122 1.694 H91C 78N 42 78N H92C H92C H 0 0 N N N 2.796 9.168 42.568 -3.792 -0.596 0.109 H92C 78N 43 78N H101 H101 H 0 0 N N N 2.565 8.363 40.212 -5.923 -1.294 -0.949 H101 78N 44 78N H102 H102 H 0 0 N N N 0.985 8.477 41.060 -6.538 -1.821 0.636 H102 78N 45 78N H111 H111 H 0 0 N N N 0.603 10.691 39.994 -6.302 0.493 1.496 H111 78N 46 78N H112 H112 H 0 0 N N N 2.153 10.508 39.104 -5.688 1.020 -0.090 H112 78N 47 78N H121 H121 H 0 0 N N N 0.985 9.506 37.470 -7.819 0.321 -1.148 H121 78N 48 78N H122 H122 H 0 0 N N N 0.745 8.123 38.590 -8.433 -0.205 0.438 H122 78N 49 78N H131 H131 H 0 0 N N N -1.455 8.544 38.701 -8.198 2.109 1.297 H131 78N 50 78N H132 H132 H 0 0 N N N -1.136 10.226 39.246 -7.583 2.635 -0.288 H132 78N 51 78N H141 H141 H 0 0 N N N -1.136 9.310 36.333 -9.714 1.937 -1.346 H141 78N 52 78N H142 H142 H 0 0 N N N -2.531 10.074 37.167 -10.329 1.410 0.239 H142 78N 53 78N H151 H151 H 0 0 N N N -1.266 11.722 35.839 -11.157 3.678 -0.328 H151 78N 54 78N H152 H152 H 0 0 N N N -1.171 12.092 37.594 -10.094 3.724 1.099 H152 78N 55 78N H153 H153 H 0 0 N N N 0.225 11.327 36.760 -9.479 4.251 -0.486 H153 78N 56 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 78N O22 C19 SING N N 1 78N C19 C18 SING N N 2 78N C18 O20 SING N N 3 78N C18 C17 SING N N 4 78N C17 O16 SING N N 5 78N O16 C8 SING N N 6 78N C8 O15 DOUB N N 7 78N C8 C7 SING N N 8 78N C7 C6 SING N N 9 78N C6 C5 SING N N 10 78N C5 C4 SING N N 11 78N C4 C3 SING N N 12 78N C3 C2 SING N N 13 78N C2 C1 DOUB N Z 14 78N C1 C9 SING N N 15 78N C9 C10 SING N N 16 78N C10 C11 SING N N 17 78N C11 C12 SING N N 18 78N C12 C13 SING N N 19 78N C13 C14 SING N N 20 78N C15 C14 SING N N 21 78N O22 H22 SING N N 22 78N C19 H191 SING N N 23 78N C19 H192 SING N N 24 78N C18 H18 SING N N 25 78N O20 H20 SING N N 26 78N C17 H171 SING N N 27 78N C17 H172 SING N N 28 78N C7 H71 SING N N 29 78N C7 H72 SING N N 30 78N C6 H61C SING N N 31 78N C6 H62C SING N N 32 78N C5 H51C SING N N 33 78N C5 H52C SING N N 34 78N C4 H41C SING N N 35 78N C4 H42C SING N N 36 78N C3 H31C SING N N 37 78N C3 H32C SING N N 38 78N C2 H2 SING N N 39 78N C1 H1 SING N N 40 78N C9 H91C SING N N 41 78N C9 H92C SING N N 42 78N C10 H101 SING N N 43 78N C10 H102 SING N N 44 78N C11 H111 SING N N 45 78N C11 H112 SING N N 46 78N C12 H121 SING N N 47 78N C12 H122 SING N N 48 78N C13 H131 SING N N 49 78N C13 H132 SING N N 50 78N C14 H141 SING N N 51 78N C14 H142 SING N N 52 78N C15 H151 SING N N 53 78N C15 H152 SING N N 54 78N C15 H153 SING N N 55 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 78N SMILES ACDLabs 12.01 "O=C(OCC(O)CO)CCCCC\C=C/CCCCCCC" 78N InChI InChI 1.03 "InChI=1S/C18H34O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-18(21)22-16-17(20)15-19/h8-9,17,19-20H,2-7,10-16H2,1H3/b9-8-/t17-/m1/s1" 78N InChIKey InChI 1.03 BJMLBVHMHXYQFS-XZVRFQMRSA-N 78N SMILES_CANONICAL CACTVS 3.370 "CCCCCCC\C=C/CCCCCC(=O)OC[C@H](O)CO" 78N SMILES CACTVS 3.370 "CCCCCCCC=CCCCCCC(=O)OC[CH](O)CO" 78N SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCCC/C=C\CCCCCC(=O)OC[C@@H](CO)O" 78N SMILES "OpenEye OEToolkits" 1.7.6 "CCCCCCCC=CCCCCCC(=O)OCC(CO)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 78N "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2,3-dihydroxypropyl (7Z)-pentadec-7-enoate" 78N "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R)-2,3-bis(oxidanyl)propyl] (Z)-pentadec-7-enoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 78N "Create component" 2012-01-19 EBI 78N "Other modification" 2012-02-08 EBI 78N "Initial release" 2013-02-01 RCSB 78N "Other modification" 2014-05-09 EBI 78N "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 78N _pdbx_chem_comp_synonyms.name "7.8 MONOACYLGLYCEROL (2R)" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##