data_79I # _chem_comp.id 79I _chem_comp.name "3-[(2S)-2-azanyl-3-azanylidene-propyl]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H13 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-09-28 _chem_comp.pdbx_modified_date 2025-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 155.198 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 79I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7VH8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 79I C16 C1 C 0 1 N N N N N N -17.211 19.842 -29.664 -2.220 0.241 -0.813 C16 79I 1 79I C12 C2 C 0 1 N N N N N N -18.438 22.041 -24.554 2.857 -0.855 0.252 C12 79I 2 79I C14 C3 C 0 1 N N N N N N -16.197 21.132 -25.305 1.347 0.877 -0.083 C14 79I 3 79I C11 C4 C 0 1 N N N N N N -18.577 21.464 -25.703 1.830 -1.384 -0.774 C11 79I 4 79I C10 C5 C 0 1 N N S N N N -17.162 20.520 -25.925 0.675 -0.368 -0.617 C10 79I 5 79I C8 C12 C 0 1 N N S N N N -17.870 19.743 -28.303 -1.501 0.127 0.506 C8 79I 6 79I C9 C13 C 0 1 N N N N N N -16.849 20.499 -27.443 -0.362 -0.887 0.381 C9 79I 7 79I N7 N1 N 0 1 N N N N N N -17.932 18.346 -27.885 -2.443 -0.320 1.540 N7 79I 8 79I N13 N2 N 0 1 N N N N N N -16.874 22.212 -24.328 2.568 0.577 0.392 N13 79I 9 79I N17 N3 N 0 1 N N N N N N -17.567 20.786 -30.404 -3.466 -0.040 -0.889 N17 79I 10 79I O15 O1 O 0 1 N N N N N N -15.033 20.965 -25.412 0.856 1.986 -0.084 O15 79I 11 79I H1 H1 H 0 1 N N N N N N -16.466 19.128 -29.982 -1.684 0.562 -1.694 H1 79I 12 79I H2 H2 H 0 1 N N N N N N -18.932 23.024 -24.559 2.729 -1.362 1.209 H2 79I 13 79I H3 H3 H 0 1 N N N N N N -18.872 21.417 -23.759 3.871 -1.001 -0.120 H3 79I 14 79I H4 H4 H 0 1 N N N N N N -19.470 20.822 -25.704 2.239 -1.357 -1.785 H4 79I 15 79I H5 H5 H 0 1 N N N N N N -18.665 22.216 -26.501 1.503 -2.391 -0.515 H5 79I 16 79I H7 H7 H 0 1 N N N N N N -17.365 19.502 -25.562 0.210 -0.167 -1.582 H7 79I 17 79I H17 H17 H 0 1 N N N N N N -18.854 20.235 -28.288 -1.093 1.099 0.782 H17 79I 18 79I H18 H18 H 0 1 N N N N N N -16.807 21.539 -27.798 -0.760 -1.839 0.029 H18 79I 19 79I H19 H19 H 0 1 N N N N N N -15.867 20.024 -27.583 0.108 -1.027 1.354 H19 79I 20 79I H33 H33 H 0 1 N N N N N N -18.367 18.285 -26.987 -2.767 -1.258 1.354 H33 79I 21 79I H34 H34 H 0 1 N N N N N N -16.413 22.851 -23.713 3.180 1.223 0.777 H34 79I 22 79I H35 H35 H 0 1 N N N N N N -17.085 20.778 -31.280 -3.929 0.033 -1.738 H35 79I 23 79I H9 H9 H 0 1 N Y N N N N -18.465 17.823 -28.550 -2.030 -0.256 2.458 H9 79I 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 79I C16 C8 SING N N 1 79I C16 N17 DOUB N N 2 79I C12 C11 SING N N 3 79I C12 N13 SING N N 4 79I C14 C10 SING N N 5 79I C14 N13 SING N N 6 79I C14 O15 DOUB N N 7 79I C10 C9 SING N N 8 79I C8 C9 SING N N 9 79I C8 N7 SING N N 10 79I C16 H1 SING N N 11 79I C12 H2 SING N N 12 79I C12 H3 SING N N 13 79I C11 H4 SING N N 14 79I C11 H5 SING N N 15 79I C10 H7 SING N N 16 79I C8 H17 SING N N 17 79I C9 H18 SING N N 18 79I C9 H19 SING N N 19 79I N7 H33 SING N N 20 79I N13 H34 SING N N 21 79I N17 H35 SING N N 22 79I N7 H9 SING N N 23 79I C11 C10 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 79I InChI InChI 1.03 "InChI=1S/C7H13N3O/c8-4-6(9)3-5-1-2-10-7(5)11/h4-6,8H,1-3,9H2,(H,10,11)/b8-4+/t5-,6-/m0/s1" 79I InChIKey InChI 1.03 OHRRKDZXFJDVKI-PYLJCTLUSA-N 79I SMILES_CANONICAL CACTVS 3.385 "N[C@@H](C[C@@H]1CCNC1=O)C=N" 79I SMILES CACTVS 3.385 "N[CH](C[CH]1CCNC1=O)C=N" 79I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C/[C@H](C[C@@H]1CCNC1=O)N" 79I SMILES "OpenEye OEToolkits" 2.0.7 "C1CNC(=O)C1CC(C=N)N" # _pdbx_chem_comp_identifier.comp_id 79I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-3-[(2~{S})-2-azanyl-3-azanylidene-propyl]pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 79I "Create component" 2021-09-28 PDBJ 79I "Initial release" 2021-11-03 RCSB 79I "Modify PCM" 2025-07-17 PDBJ # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 79I _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid backbone" _pdbx_chem_comp_pcm.polypeptide_position C-terminal _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #