data_79M # _chem_comp.id 79M _chem_comp.name "(2R)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H36 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "[(2R)-2,3-bis(oxidanyl)propyl] (Z)-hexadec-7-enoate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-06-05 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 328.487 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 79M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4BRR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 79M C19 C19 C 0 1 N N N -25.980 -12.708 4.697 11.230 -3.073 -0.307 C19 79M 1 79M C8 C8 C 0 1 N N N -25.049 -10.724 12.315 3.357 3.020 0.317 C8 79M 2 79M C7 C7 C 0 1 N N N -25.343 -9.682 13.061 2.246 3.184 -0.357 C7 79M 3 79M C15 C15 C 0 1 N N N -25.139 -12.188 5.838 9.774 -2.955 0.146 C15 79M 4 79M C9 C9 C 0 1 N N N -24.209 -10.710 11.082 3.863 1.631 0.610 C9 79M 5 79M C6 C6 C 0 1 N N N -24.881 -8.279 12.834 1.385 1.993 -0.692 C6 79M 6 79M C21 C21 C 0 1 N N N -31.474 -9.278 14.447 -6.910 -0.301 0.364 C21 79M 7 79M C14 C14 C 0 1 N N N -24.016 -13.132 6.202 9.260 -1.545 -0.152 C14 79M 8 79M C10 C10 C 0 1 N N N -23.165 -11.815 11.032 5.320 1.513 0.158 C10 79M 9 79M C5 C5 C 0 1 N N N -25.991 -7.250 12.975 -0.044 2.244 -0.209 C5 79M 10 79M C13 C13 C 0 1 N N N -23.025 -12.583 7.219 7.803 -1.426 0.301 C13 79M 11 79M C11 C11 C 0 1 N N N -22.570 -12.000 9.647 5.833 0.102 0.456 C11 79M 12 79M C4 C4 C 0 1 N N N -26.899 -7.502 14.159 -0.918 1.035 -0.549 C4 79M 13 79M C12 C12 C 0 1 N N N -23.600 -12.368 8.597 7.290 -0.016 0.003 C12 79M 14 79M C3 C3 C 0 1 N N N -27.827 -6.357 14.475 -2.347 1.286 -0.065 C3 79M 15 79M C2 C2 C 0 1 N N N -28.957 -6.748 15.416 -3.221 0.077 -0.405 C2 79M 16 79M C24 C24 C 0 1 N N N -33.815 -9.967 15.052 -9.218 -1.204 0.677 C24 79M 17 79M C22 C22 C 0 1 N N R -32.580 -9.205 15.472 -7.845 -1.472 0.057 C22 79M 18 79M O19 O19 O 0 1 N N N -30.839 -6.728 13.935 -4.905 1.362 0.626 O19 79M 19 79M C1 C1 C 0 1 N N N -30.141 -7.329 14.702 -4.629 0.324 0.071 C1 79M 20 79M O20 O20 O 0 1 N N N -30.336 -8.608 15.036 -5.576 -0.607 -0.121 O20 79M 21 79M O23 O23 O 0 1 N N N -32.099 -9.711 16.720 -7.981 -1.616 -1.358 O23 79M 22 79M O25 O25 O 0 1 N N N -34.372 -9.419 13.865 -10.056 -2.347 0.491 O25 79M 23 79M H21C H21C H 0 0 N N N -29.283 -5.851 15.963 -3.224 -0.077 -1.484 H21C 79M 24 79M H22C H22C H 0 0 N N N -28.577 -7.495 16.129 -2.821 -0.810 0.087 H22C 79M 25 79M H31C H31C H 0 0 N N N -28.265 -5.991 13.535 -2.344 1.440 1.014 H31C 79M 26 79M H32C H32C H 0 0 N N N -27.243 -5.552 14.945 -2.747 2.173 -0.557 H32C 79M 27 79M H41C H41C H 0 0 N N N -26.271 -7.692 15.042 -0.921 0.881 -1.628 H41C 79M 28 79M H42C H42C H 0 0 N N N -27.509 -8.392 13.944 -0.518 0.148 -0.057 H42C 79M 29 79M H51C H51C H 0 0 N N N -26.600 -7.267 12.059 -0.041 2.398 0.871 H51C 79M 30 79M H52C H52C H 0 0 N N N -25.533 -6.257 13.093 -0.444 3.131 -0.701 H52C 79M 31 79M H61C H61C H 0 0 N N N -24.466 -8.208 11.818 1.382 1.839 -1.771 H61C 79M 32 79M H62C H62C H 0 0 N N N -24.095 -8.047 13.568 1.785 1.106 -0.200 H62C 79M 33 79M H7 H7 H 0 1 N N N -25.977 -9.856 13.918 1.946 4.172 -0.673 H7 79M 34 79M H8 H8 H 0 1 N N N -25.452 -11.677 12.623 3.911 3.881 0.663 H8 79M 35 79M H91 H91 H 0 1 N N N -24.872 -10.820 10.211 3.799 1.440 1.681 H91 79M 36 79M H92 H92 H 0 1 N N N -23.690 -9.741 11.028 3.255 0.902 0.074 H92 79M 37 79M H101 H101 H 0 0 N N N -22.354 -11.565 11.732 5.384 1.704 -0.913 H101 79M 38 79M H102 H102 H 0 0 N N N -23.638 -12.759 11.341 5.927 2.241 0.694 H102 79M 39 79M H111 H111 H 0 0 N N N -22.086 -11.059 9.346 5.769 -0.089 1.527 H111 79M 40 79M H112 H112 H 0 0 N N N -21.818 -12.801 9.694 5.226 -0.626 -0.081 H112 79M 41 79M H121 H121 H 0 0 N N N -24.098 -13.297 8.912 7.897 0.713 0.539 H121 79M 42 79M H122 H122 H 0 0 N N N -24.340 -11.556 8.540 7.354 0.176 -1.068 H122 79M 43 79M H131 H131 H 0 0 N N N -22.651 -11.617 6.848 7.196 -2.155 -0.236 H131 79M 44 79M H132 H132 H 0 0 N N N -22.189 -13.293 7.302 7.739 -1.618 1.372 H132 79M 45 79M H141 H141 H 0 0 N N N -23.463 -13.377 5.283 9.868 -0.816 0.385 H141 79M 46 79M H142 H142 H 0 0 N N N -24.460 -14.048 6.617 9.325 -1.353 -1.223 H142 79M 47 79M H151 H151 H 0 0 N N N -25.784 -12.050 6.718 9.166 -3.684 -0.391 H151 79M 48 79M H152 H152 H 0 0 N N N -24.706 -11.220 5.545 9.709 -3.146 1.217 H152 79M 49 79M H191 H191 H 0 0 N N N -26.780 -11.987 4.472 11.295 -2.882 -1.378 H191 79M 50 79M H192 H192 H 0 0 N N N -25.347 -12.843 3.807 11.838 -2.344 0.230 H192 79M 51 79M H193 H193 H 0 0 N N N -26.425 -13.673 4.980 11.596 -4.078 -0.094 H193 79M 52 79M H211 H211 H 0 0 N N N -31.778 -8.770 13.520 -7.279 0.598 -0.131 H211 79M 53 79M H212 H212 H 0 0 N N N -31.227 -10.327 14.226 -6.876 -0.135 1.441 H212 79M 54 79M H22 H22 H 0 1 N N N -32.859 -8.148 15.597 -7.430 -2.388 0.477 H22 79M 55 79M H23 H23 H 0 1 N N N -32.792 -9.667 17.368 -8.346 -0.836 -1.799 H23 79M 56 79M H241 H241 H 0 0 N N N -33.545 -11.018 14.871 -9.104 -1.007 1.743 H241 79M 57 79M H242 H242 H 0 0 N N N -34.562 -9.914 15.858 -9.672 -0.339 0.194 H242 79M 58 79M H25 H25 H 0 1 N N N -35.146 -9.913 13.620 -10.944 -2.247 0.860 H25 79M 59 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 79M C1 C2 SING N N 1 79M C1 O19 DOUB N N 2 79M C1 O20 SING N N 3 79M C2 C3 SING N N 4 79M C3 C4 SING N N 5 79M C4 C5 SING N N 6 79M C5 C6 SING N N 7 79M C6 C7 SING N N 8 79M C7 C8 DOUB N Z 9 79M C8 C9 SING N N 10 79M C9 C10 SING N N 11 79M C10 C11 SING N N 12 79M C11 C12 SING N N 13 79M C12 C13 SING N N 14 79M C13 C14 SING N N 15 79M C14 C15 SING N N 16 79M C15 C19 SING N N 17 79M O20 C21 SING N N 18 79M C21 C22 SING N N 19 79M C22 O23 SING N N 20 79M C22 C24 SING N N 21 79M C24 O25 SING N N 22 79M C2 H21C SING N N 23 79M C2 H22C SING N N 24 79M C3 H31C SING N N 25 79M C3 H32C SING N N 26 79M C4 H41C SING N N 27 79M C4 H42C SING N N 28 79M C5 H51C SING N N 29 79M C5 H52C SING N N 30 79M C6 H61C SING N N 31 79M C6 H62C SING N N 32 79M C7 H7 SING N N 33 79M C8 H8 SING N N 34 79M C9 H91 SING N N 35 79M C9 H92 SING N N 36 79M C10 H101 SING N N 37 79M C10 H102 SING N N 38 79M C11 H111 SING N N 39 79M C11 H112 SING N N 40 79M C12 H121 SING N N 41 79M C12 H122 SING N N 42 79M C13 H131 SING N N 43 79M C13 H132 SING N N 44 79M C14 H141 SING N N 45 79M C14 H142 SING N N 46 79M C15 H151 SING N N 47 79M C15 H152 SING N N 48 79M C19 H191 SING N N 49 79M C19 H192 SING N N 50 79M C19 H193 SING N N 51 79M C21 H211 SING N N 52 79M C21 H212 SING N N 53 79M C22 H22 SING N N 54 79M O23 H23 SING N N 55 79M C24 H241 SING N N 56 79M C24 H242 SING N N 57 79M O25 H25 SING N N 58 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 79M SMILES ACDLabs 12.01 "O=C(OCC(O)CO)CCCCC\C=C/CCCCCCCC" 79M InChI InChI 1.03 "InChI=1S/C19H36O4/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-19(22)23-17-18(21)16-20/h9-10,18,20-21H,2-8,11-17H2,1H3/b10-9-/t18-/m1/s1" 79M InChIKey InChI 1.03 OWGMAJRKMYGYBQ-HJCTWCACSA-N 79M SMILES_CANONICAL CACTVS 3.385 "CCCCCCCC\C=C/CCCCCC(=O)OC[C@H](O)CO" 79M SMILES CACTVS 3.385 "CCCCCCCCC=CCCCCCC(=O)OC[CH](O)CO" 79M SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCCCCCCC/C=C\CCCCCC(=O)OC[C@@H](CO)O" 79M SMILES "OpenEye OEToolkits" 1.9.2 "CCCCCCCCC=CCCCCCC(=O)OCC(CO)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 79M "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2,3-dihydroxypropyl (7Z)-hexadec-7-enoate" 79M "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "[(2R)-2,3-bis(oxidanyl)propyl] (Z)-hexadec-7-enoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 79M "Create component" 2013-06-05 EBI 79M "Other modification" 2013-06-12 EBI 79M "Initial release" 2014-06-18 RCSB 79M "Modify descriptor" 2014-09-05 RCSB 79M "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 79M _pdbx_chem_comp_synonyms.name "[(2R)-2,3-bis(oxidanyl)propyl] (Z)-hexadec-7-enoate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##