data_7AY # _chem_comp.id 7AY _chem_comp.name "5-chloro-7-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-8-methyl-2-naphthonitrile" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H18 Cl N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms JLJ651 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-09-26 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 447.870 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7AY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5TER _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7AY CAH C1 C 0 1 Y N N 356.291 -30.620 144.442 2.813 1.389 -0.618 CAH 7AY 1 7AY CAI C2 C 0 1 Y N N 355.578 -31.373 145.414 3.479 0.164 -0.435 CAI 7AY 2 7AY CAJ C3 C 0 1 Y N N 355.940 -32.692 145.632 2.958 -0.780 0.486 CAJ 7AY 3 7AY CAK C4 C 0 1 Y N N 357.001 -33.274 144.897 1.787 -0.475 1.200 CAK 7AY 4 7AY CAL C5 C 0 1 Y N N 357.696 -32.521 143.942 1.165 0.725 0.998 CAL 7AY 5 7AY CAM C6 C 0 1 Y N N 357.340 -31.195 143.715 1.679 1.655 0.089 CAM 7AY 6 7AY CAY C7 C 0 1 Y N N 354.484 -30.788 146.176 4.651 -0.135 -1.153 CAY 7AY 7 7AY CAZ C8 C 0 1 Y N N 353.821 -31.544 147.103 5.279 -1.324 -0.963 CAZ 7AY 8 7AY CBA C9 C 0 1 Y N N 354.198 -32.915 147.330 4.773 -2.270 -0.052 CBA 7AY 9 7AY CBB C10 C 0 1 Y N N 355.239 -33.481 146.608 3.621 -2.004 0.670 CBB 7AY 10 7AY CBC C11 C 0 1 N N N 353.463 -33.755 148.358 5.453 -3.516 0.129 CBC 7AY 11 7AY NBD N1 N 0 1 N N N 352.910 -34.406 149.140 5.993 -4.505 0.274 NBD 7AY 12 7AY C0P C12 C 0 1 N N N 356.530 -34.982 140.417 -2.633 -1.901 -0.375 C0P 7AY 13 7AY C00 C13 C 0 1 Y N N 361.070 -31.366 140.860 -2.207 3.374 0.037 C00 7AY 14 7AY C0D C14 C 0 1 N N N 358.997 -32.884 139.159 -2.756 1.167 -1.426 C0D 7AY 15 7AY C0E C15 C 0 1 N N N 357.707 -33.642 138.748 -2.905 -0.193 -2.111 C0E 7AY 16 7AY C0K C16 C 0 1 N N N 358.309 -36.074 139.153 -4.803 -1.306 -1.077 C0K 7AY 17 7AY C0N C17 C 0 1 N N N 357.074 -37.323 140.842 -4.558 -2.940 0.574 C0N 7AY 18 7AY C0O C18 C 0 1 N N N 356.281 -36.121 141.115 -3.152 -2.791 0.498 C0O 7AY 19 7AY N0H N2 N 0 1 N N N 357.549 -34.952 139.426 -3.469 -1.158 -1.163 N0H 7AY 20 7AY N0M N3 N 0 1 N N N 358.019 -37.183 139.881 -5.348 -2.185 -0.216 N0M 7AY 21 7AY O0A O1 O 0 1 N N N 358.781 -33.109 143.185 0.032 1.018 1.688 O0A 7AY 22 7AY O0B O2 O 0 1 N N N 359.015 -32.806 140.583 -1.796 1.067 -0.372 O0B 7AY 23 7AY O0Q O3 O 0 1 N N N 359.204 -36.117 138.312 -5.528 -0.635 -1.787 O0Q 7AY 24 7AY O0S O4 O 0 1 N N N 356.915 -38.391 141.425 -5.050 -3.737 1.354 O0S 7AY 25 7AY C01 C19 C 0 1 Y N N 361.972 -30.777 141.778 -1.949 4.521 0.764 C01 7AY 26 7AY C02 C20 C 0 1 Y N N 361.803 -30.969 143.167 -1.031 4.497 1.798 C02 7AY 27 7AY C03 C21 C 0 1 Y N N 360.733 -31.751 143.648 -0.367 3.325 2.109 C03 7AY 28 7AY C04 C22 C 0 1 Y N N 359.826 -32.343 142.730 -0.621 2.171 1.384 C04 7AY 29 7AY C05 C23 C 0 1 Y N N 359.981 -32.161 141.335 -1.545 2.196 0.343 C05 7AY 30 7AY C31 C24 C 0 1 N N N 357.355 -34.718 145.172 1.219 -1.467 2.182 C31 7AY 31 7AY CL1 CL1 CL 0 0 N N N 355.880 -28.958 144.127 3.437 2.562 -1.735 CL1 7AY 32 7AY H1 H1 H 0 1 N N N 357.872 -30.610 142.979 1.171 2.597 -0.054 H1 7AY 33 7AY H2 H2 H 0 1 N N N 354.197 -29.760 146.010 5.052 0.580 -1.855 H2 7AY 34 7AY H3 H3 H 0 1 N N N 353.010 -31.110 147.668 6.178 -1.546 -1.518 H3 7AY 35 7AY H4 H4 H 0 1 N N N 355.521 -34.509 146.778 3.236 -2.732 1.368 H4 7AY 36 7AY H5 H5 H 0 1 N N N 355.950 -34.093 140.616 -1.563 -1.774 -0.447 H5 7AY 37 7AY H6 H6 H 0 1 N N N 361.205 -31.215 139.799 -2.927 3.395 -0.767 H6 7AY 38 7AY H7 H7 H 0 1 N N N 359.883 -33.430 138.802 -2.421 1.906 -2.154 H7 7AY 39 7AY H8 H8 H 0 1 N N N 358.991 -31.872 138.728 -3.718 1.473 -1.014 H8 7AY 40 7AY H9 H9 H 0 1 N N N 356.839 -33.014 138.998 -3.569 -0.097 -2.970 H9 7AY 41 7AY H10 H10 H 0 1 N N N 357.735 -33.813 137.662 -1.927 -0.540 -2.445 H10 7AY 42 7AY H11 H11 H 0 1 N N N 355.505 -36.140 141.865 -2.504 -3.381 1.129 H11 7AY 43 7AY H12 H12 H 0 1 N N N 358.569 -37.994 139.684 -6.312 -2.279 -0.166 H12 7AY 44 7AY H13 H13 H 0 1 N N N 362.794 -30.178 141.415 -2.466 5.439 0.524 H13 7AY 45 7AY H14 H14 H 0 1 N N N 362.495 -30.516 143.862 -0.833 5.395 2.364 H14 7AY 46 7AY H15 H15 H 0 1 N N N 360.604 -31.899 144.710 0.350 3.308 2.917 H15 7AY 47 7AY H16 H16 H 0 1 N N N 358.113 -34.765 145.968 1.647 -1.287 3.168 H16 7AY 48 7AY H17 H17 H 0 1 N N N 356.454 -35.262 145.492 0.136 -1.351 2.230 H17 7AY 49 7AY H18 H18 H 0 1 N N N 357.756 -35.178 144.257 1.462 -2.479 1.859 H18 7AY 50 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7AY O0Q C0K DOUB N N 1 7AY C0E C0D SING N N 2 7AY C0E N0H SING N N 3 7AY C0K N0H SING N N 4 7AY C0K N0M SING N N 5 7AY C0D O0B SING N N 6 7AY N0H C0P SING N N 7 7AY N0M C0N SING N N 8 7AY C0P C0O DOUB N N 9 7AY O0B C05 SING N N 10 7AY C0N C0O SING N N 11 7AY C0N O0S DOUB N N 12 7AY C00 C05 DOUB Y N 13 7AY C00 C01 SING Y N 14 7AY C05 C04 SING Y N 15 7AY C01 C02 DOUB Y N 16 7AY C04 O0A SING N N 17 7AY C04 C03 DOUB Y N 18 7AY C02 C03 SING Y N 19 7AY O0A CAL SING N N 20 7AY CAM CAL DOUB Y N 21 7AY CAM CAH SING Y N 22 7AY CAL CAK SING Y N 23 7AY CL1 CAH SING N N 24 7AY CAH CAI DOUB Y N 25 7AY CAK C31 SING N N 26 7AY CAK CAJ DOUB Y N 27 7AY CAI CAJ SING Y N 28 7AY CAI CAY SING Y N 29 7AY CAJ CBB SING Y N 30 7AY CAY CAZ DOUB Y N 31 7AY CBB CBA DOUB Y N 32 7AY CAZ CBA SING Y N 33 7AY CBA CBC SING N N 34 7AY CBC NBD TRIP N N 35 7AY CAM H1 SING N N 36 7AY CAY H2 SING N N 37 7AY CAZ H3 SING N N 38 7AY CBB H4 SING N N 39 7AY C0P H5 SING N N 40 7AY C00 H6 SING N N 41 7AY C0D H7 SING N N 42 7AY C0D H8 SING N N 43 7AY C0E H9 SING N N 44 7AY C0E H10 SING N N 45 7AY C0O H11 SING N N 46 7AY N0M H12 SING N N 47 7AY C01 H13 SING N N 48 7AY C02 H14 SING N N 49 7AY C03 H15 SING N N 50 7AY C31 H16 SING N N 51 7AY C31 H17 SING N N 52 7AY C31 H18 SING N N 53 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7AY SMILES ACDLabs 12.01 "c2(c1c(cc(cc1)C#N)c(C)c(c2)Oc4ccccc4OCCN3C=CC(=O)NC3=O)Cl" 7AY InChI InChI 1.03 "InChI=1S/C24H18ClN3O4/c1-15-18-12-16(14-26)6-7-17(18)19(25)13-22(15)32-21-5-3-2-4-20(21)31-11-10-28-9-8-23(29)27-24(28)30/h2-9,12-13H,10-11H2,1H3,(H,27,29,30)" 7AY InChIKey InChI 1.03 KFUNYNPQHKSQRQ-UHFFFAOYSA-N 7AY SMILES_CANONICAL CACTVS 3.385 "Cc1c(Oc2ccccc2OCCN3C=CC(=O)NC3=O)cc(Cl)c4ccc(cc14)C#N" 7AY SMILES CACTVS 3.385 "Cc1c(Oc2ccccc2OCCN3C=CC(=O)NC3=O)cc(Cl)c4ccc(cc14)C#N" 7AY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)Cl)C#N" 7AY SMILES "OpenEye OEToolkits" 2.0.6 "Cc1c2cc(ccc2c(cc1Oc3ccccc3OCCN4C=CC(=O)NC4=O)Cl)C#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7AY "SYSTEMATIC NAME" ACDLabs 12.01 "5-chloro-7-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-8-methylnaphthalene-2-carbonitrile" 7AY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "7-[2-[2-[2,4-bis(oxidanylidene)pyrimidin-1-yl]ethoxy]phenoxy]-5-chloranyl-8-methyl-naphthalene-2-carbonitrile" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7AY "Create component" 2016-09-26 RCSB 7AY "Initial release" 2017-01-11 RCSB 7AY "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 7AY _pdbx_chem_comp_synonyms.name JLJ651 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##