data_7CV # _chem_comp.id 7CV _chem_comp.name "6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose" _chem_comp.type "L-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C8 H16 O5" _chem_comp.mon_nstd_parent_comp_id RAM _chem_comp.pdbx_synonyms "6-deoxy-2,3-di-O-methyl-alpha-L-mannose; 6-deoxy-2,3-di-O-methyl-L-mannose; 6-deoxy-2,3-di-O-methyl-mannose" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-10-05 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 192.210 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7CV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5TIP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 7CV "6-deoxy-2,3-di-O-methyl-alpha-L-mannose" PDB ? 2 7CV "6-deoxy-2,3-di-O-methyl-L-mannose" PDB ? 3 7CV "6-deoxy-2,3-di-O-methyl-mannose" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7CV C1 C1 C 0 1 N N R 50.171 63.927 72.457 1.245 1.147 0.676 C1 7CV 1 7CV C2 C2 C 0 1 N N R 50.387 65.024 71.453 1.212 -0.338 0.306 C2 7CV 2 7CV C3 C3 C 0 1 N N R 50.423 64.414 70.054 -0.226 -0.854 0.425 C3 7CV 3 7CV C4 C4 C 0 1 N N S 49.149 63.632 69.783 -1.135 -0.009 -0.473 C4 7CV 4 7CV C5 C5 C 0 1 N N S 49.022 62.589 70.876 -1.011 1.463 -0.072 C5 7CV 5 7CV C6 C6 C 0 1 N N N 47.764 61.775 70.732 -1.871 2.320 -1.003 C6 7CV 6 7CV O2 O2 O 0 1 N N N 49.352 65.988 71.619 1.669 -0.505 -1.038 O2 7CV 7 7CV O3 O3 O 0 1 N N N 50.550 65.418 69.089 -0.279 -2.221 0.012 O3 7CV 8 7CV O4 O4 O 0 1 N N N 49.273 63.059 68.512 -2.490 -0.435 -0.315 O4 7CV 9 7CV O5 O5 O 0 1 N N N 49.019 63.230 72.139 0.355 1.870 -0.176 O5 7CV 10 7CV C24 C24 C 0 1 N N N 49.455 66.841 72.759 3.079 -0.709 -1.151 C24 7CV 11 7CV C27 C27 C 0 1 N N N 51.867 65.807 68.744 -1.293 -2.986 0.666 C27 7CV 12 7CV O1 O1 O 0 1 N Y N 51.380 63.379 72.617 0.839 1.308 2.037 O1 7CV 13 7CV H1 H1 H 0 1 N N N 49.948 64.456 73.395 2.259 1.530 0.552 H1 7CV 14 7CV H2 H2 H 0 1 N N N 51.363 65.492 71.650 1.858 -0.897 0.982 H2 7CV 15 7CV H3 H3 H 0 1 N N N 51.277 63.722 69.998 -0.558 -0.772 1.460 H3 7CV 16 7CV H4 H4 H 0 1 N N N 48.287 64.314 69.827 -0.834 -0.130 -1.514 H4 7CV 17 7CV H5 H5 H 0 1 N N N 49.885 61.910 70.808 -1.351 1.590 0.956 H5 7CV 18 7CV H61 H6 H 0 1 N N N 47.712 61.033 71.542 -2.913 2.009 -0.925 H61 7CV 19 7CV H62 H7 H 0 1 N N N 46.889 62.440 70.787 -1.782 3.368 -0.718 H62 7CV 20 7CV H63 H8 H 0 1 N N N 47.771 61.258 69.761 -1.531 2.193 -2.031 H63 7CV 21 7CV HO4 H9 H 0 1 N Y N 48.489 62.561 68.311 -3.123 0.058 -0.855 HO4 7CV 22 7CV H10 H10 H 0 1 N N N 48.603 67.536 72.776 3.605 0.151 -0.737 H10 7CV 23 7CV H11 H11 H 0 1 N N N 49.449 66.231 73.675 3.361 -1.607 -0.601 H11 7CV 24 7CV H12 H12 H 0 1 N N N 50.393 67.413 72.706 3.346 -0.827 -2.201 H12 7CV 25 7CV H13 H13 H 0 1 N N N 51.828 66.598 67.981 -1.114 -2.982 1.742 H13 7CV 26 7CV H14 H14 H 0 1 N N N 52.383 66.186 69.638 -2.269 -2.549 0.459 H14 7CV 27 7CV H15 H15 H 0 1 N N N 52.413 64.939 68.345 -1.268 -4.012 0.298 H15 7CV 28 7CV HO1 H16 H 0 1 N Y N 51.325 62.668 73.245 0.836 2.226 2.341 HO1 7CV 29 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7CV O4 C4 SING N N 1 7CV C27 O3 SING N N 2 7CV O3 C3 SING N N 3 7CV C4 C3 SING N N 4 7CV C4 C5 SING N N 5 7CV C3 C2 SING N N 6 7CV C6 C5 SING N N 7 7CV C5 O5 SING N N 8 7CV C2 O2 SING N N 9 7CV C2 C1 SING N N 10 7CV O2 C24 SING N N 11 7CV O5 C1 SING N N 12 7CV C1 O1 SING N N 13 7CV C1 H1 SING N N 14 7CV C2 H2 SING N N 15 7CV C3 H3 SING N N 16 7CV C4 H4 SING N N 17 7CV C5 H5 SING N N 18 7CV C6 H61 SING N N 19 7CV C6 H62 SING N N 20 7CV C6 H63 SING N N 21 7CV O4 HO4 SING N N 22 7CV C24 H10 SING N N 23 7CV C24 H11 SING N N 24 7CV C24 H12 SING N N 25 7CV C27 H13 SING N N 26 7CV C27 H14 SING N N 27 7CV C27 H15 SING N N 28 7CV O1 HO1 SING N N 29 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7CV SMILES ACDLabs 12.01 "C1(O)C(OC)C(C(C(O1)C)O)OC" 7CV InChI InChI 1.03 "InChI=1S/C8H16O5/c1-4-5(9)6(11-2)7(12-3)8(10)13-4/h4-10H,1-3H3/t4-,5-,6+,7+,8+/m0/s1" 7CV InChIKey InChI 1.03 SXWBIRCAXZNEGK-TVNFTVLESA-N 7CV SMILES_CANONICAL CACTVS 3.385 "CO[C@H]1[C@H](O)O[C@@H](C)[C@H](O)[C@H]1OC" 7CV SMILES CACTVS 3.385 "CO[CH]1[CH](O)O[CH](C)[CH](O)[CH]1OC" 7CV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O)OC)OC)O" 7CV SMILES "OpenEye OEToolkits" 2.0.6 "CC1C(C(C(C(O1)O)OC)OC)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7CV "SYSTEMATIC NAME" ACDLabs 12.01 "6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose" 7CV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R},3~{R},4~{R},5~{S},6~{S})-3,4-dimethoxy-6-methyl-oxane-2,5-diol" 7CV "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 "LRhap[2Me,3Me]a" 7CV "COMMON NAME" GMML 1.0 2-methyl-3-methyl-a-L-rhamnoopyranose # _pdbx_chem_comp_related.comp_id 7CV _pdbx_chem_comp_related.related_comp_id RAM _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 7CV C1 RAM C1 "Carbohydrate core" 2 7CV C2 RAM C2 "Carbohydrate core" 3 7CV C3 RAM C3 "Carbohydrate core" 4 7CV C4 RAM C4 "Carbohydrate core" 5 7CV C5 RAM C5 "Carbohydrate core" 6 7CV C6 RAM C6 "Carbohydrate core" 7 7CV O1 RAM O1 "Carbohydrate core" 8 7CV O2 RAM O2 "Carbohydrate core" 9 7CV O3 RAM O3 "Carbohydrate core" 10 7CV O4 RAM O4 "Carbohydrate core" 11 7CV O5 RAM O5 "Carbohydrate core" 12 7CV H1 RAM H1 "Carbohydrate core" 13 7CV HO1 RAM HO1 "Carbohydrate core" 14 7CV H2 RAM H2 "Carbohydrate core" 15 7CV H3 RAM H3 "Carbohydrate core" 16 7CV H4 RAM H4 "Carbohydrate core" 17 7CV H5 RAM H5 "Carbohydrate core" 18 7CV H61 RAM H61 "Carbohydrate core" 19 7CV H62 RAM H62 "Carbohydrate core" 20 7CV H63 RAM H63 "Carbohydrate core" 21 7CV HO4 RAM HO4 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 7CV "CARBOHYDRATE ISOMER" L PDB ? 7CV "CARBOHYDRATE RING" pyranose PDB ? 7CV "CARBOHYDRATE ANOMER" alpha PDB ? 7CV "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7CV "Create component" 2016-10-05 RCSB 7CV "Initial release" 2017-10-18 RCSB 7CV "Other modification" 2020-07-03 RCSB 7CV "Modify parent residue" 2020-07-17 RCSB 7CV "Modify synonyms" 2020-07-17 RCSB 7CV "Modify internal type" 2020-07-17 RCSB 7CV "Modify linking type" 2020-07-17 RCSB 7CV "Modify atom id" 2020-07-17 RCSB 7CV "Modify component atom id" 2020-07-17 RCSB 7CV "Modify leaving atom flag" 2020-07-17 RCSB ##