data_7GB # _chem_comp.id 7GB _chem_comp.name "6-azanyl-9-[(3~{R})-1-[(~{E})-but-2-enoyl]pyrrolidin-3-yl]-7-(4-phenoxyphenyl)purin-8-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H24 N6 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-10-19 _chem_comp.pdbx_modified_date 2017-05-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 456.496 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7GB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5P9M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7GB C2 C1 C 0 1 Y N N -18.784 4.886 0.533 -1.118 -4.636 1.063 C2 7GB 1 7GB C8 C2 C 0 1 N N N -20.991 6.709 -2.770 -0.840 -0.481 -0.521 C8 7GB 2 7GB C11 C3 C 0 1 N N R -22.493 6.750 -0.670 -3.284 -0.935 -0.228 C11 7GB 3 7GB C12 C4 C 0 1 N N N -23.862 6.420 -1.248 -3.675 -0.438 -1.645 C12 7GB 4 7GB C13 C5 C 0 1 N N N -24.789 7.606 -1.109 -4.886 0.478 -1.367 C13 7GB 5 7GB C15 C6 C 0 1 N N N -22.568 8.280 -0.422 -3.586 0.315 0.635 C15 7GB 6 7GB C16 C7 C 0 1 N N N -23.781 9.670 -2.091 -5.685 1.694 0.675 C16 7GB 7 7GB O17 O1 O 0 1 N N N -24.694 9.808 -2.890 -5.512 1.981 1.844 O17 7GB 8 7GB C19 C8 C 0 1 N N N -22.271 11.475 -1.188 -7.731 2.995 0.584 C19 7GB 9 7GB C20 C9 C 0 1 N N N -21.152 12.445 -1.508 -8.933 3.527 -0.153 C20 7GB 10 7GB C22 C10 C 0 1 Y N N -19.215 6.338 -4.342 1.605 -0.610 -0.593 C22 7GB 11 7GB C24 C11 C 0 1 Y N N -18.465 7.357 -6.422 3.487 -0.364 -2.059 C24 7GB 12 7GB C27 C12 C 0 1 Y N N -19.024 5.111 -4.990 2.245 0.169 0.362 C27 7GB 13 7GB O28 O2 O 0 1 N N N -17.790 6.059 -8.248 5.367 0.911 -1.353 O28 7GB 14 7GB C30 C13 C 0 1 Y N N -15.600 7.099 -7.923 6.056 2.969 -0.378 C30 7GB 15 7GB C31 C14 C 0 1 Y N N -14.540 7.754 -8.495 6.697 3.649 0.639 C31 7GB 16 7GB C32 C15 C 0 1 Y N N -14.582 8.190 -9.813 7.285 2.950 1.677 C32 7GB 17 7GB C33 C16 C 0 1 Y N N -15.676 7.935 -10.587 7.233 1.569 1.700 C33 7GB 18 7GB C34 C17 C 0 1 Y N N -16.722 7.196 -10.018 6.593 0.883 0.686 C34 7GB 19 7GB N1 N1 N 0 1 Y N N -17.837 4.730 -0.385 0.197 -4.590 0.974 N1 7GB 20 7GB N3 N2 N 0 1 Y N N -19.990 5.396 0.303 -1.882 -3.620 0.717 N3 7GB 21 7GB C4 C18 C 0 1 Y N N -20.249 5.859 -0.944 -1.345 -2.492 0.264 C4 7GB 22 7GB C5 C19 C 0 1 Y N N -19.273 5.711 -1.993 0.044 -2.399 0.159 C5 7GB 23 7GB C6 C20 C 0 1 Y N N -17.973 5.185 -1.672 0.816 -3.498 0.530 C6 7GB 24 7GB N7 N3 N 0 1 N N N -21.304 6.465 -1.489 -1.862 -1.284 -0.167 N7 7GB 25 7GB N9 N4 N 0 1 N N N -19.745 6.321 -3.114 0.328 -1.127 -0.335 N9 7GB 26 7GB O10 O3 O 0 1 N N N -21.808 7.319 -3.570 -0.954 0.654 -0.944 O10 7GB 27 7GB N14 N5 N 0 1 N N N -23.718 8.627 -1.222 -4.800 0.901 0.038 N14 7GB 28 7GB C18 C21 C 0 1 N N N -22.681 10.660 -2.203 -6.858 2.213 -0.045 C18 7GB 29 7GB N21 N6 N 0 1 N N N -16.867 5.049 -2.534 2.200 -3.453 0.444 N21 7GB 30 7GB C23 C22 C 0 1 Y N N -18.973 7.463 -5.162 2.228 -0.873 -1.806 C23 7GB 31 7GB C25 C23 C 0 1 Y N N -18.240 6.123 -6.997 4.128 0.410 -1.103 C25 7GB 32 7GB C26 C24 C 0 1 Y N N -18.494 4.977 -6.265 3.503 0.677 0.107 C26 7GB 33 7GB C29 C25 C 0 1 Y N N -16.693 6.781 -8.714 5.997 1.583 -0.354 C29 7GB 34 7GB H1 H1 H 0 1 N N N -18.557 4.575 1.542 -1.584 -5.540 1.427 H1 7GB 35 7GB H2 H2 H 0 1 N N N -22.392 6.248 0.303 -3.904 -1.779 0.075 H2 7GB 36 7GB H3 H3 H 0 1 N N N -24.287 5.562 -0.707 -2.858 0.128 -2.094 H3 7GB 37 7GB H4 H4 H 0 1 N N N -23.755 6.166 -2.313 -3.962 -1.275 -2.281 H4 7GB 38 7GB H5 H5 H 0 1 N N N -25.528 7.669 -1.921 -4.848 1.350 -2.020 H5 7GB 39 7GB H6 H6 H 0 1 N N N -25.307 7.634 -0.139 -5.812 -0.071 -1.536 H6 7GB 40 7GB H7 H7 H 0 1 N N N -21.660 8.792 -0.774 -3.774 0.026 1.669 H7 7GB 41 7GB H8 H8 H 0 1 N N N -22.730 8.510 0.641 -2.758 1.021 0.584 H8 7GB 42 7GB H9 H9 H 0 1 N N N -22.721 11.431 -0.207 -7.578 3.250 1.622 H9 7GB 43 7GB H10 H10 H 0 1 N N N -20.915 13.041 -0.614 -9.537 2.693 -0.512 H10 7GB 44 7GB H11 H11 H 0 1 N N N -20.259 11.884 -1.822 -9.528 4.144 0.520 H11 7GB 45 7GB H12 H12 H 0 1 N N N -21.469 13.115 -2.321 -8.603 4.128 -1.001 H12 7GB 46 7GB H13 H13 H 0 1 N N N -18.235 8.253 -6.979 3.971 -0.568 -3.003 H13 7GB 47 7GB H14 H14 H 0 1 N N N -19.307 4.212 -4.463 1.759 0.377 1.303 H14 7GB 48 7GB H15 H15 H 0 1 N N N -15.584 6.836 -6.876 5.597 3.516 -1.189 H15 7GB 49 7GB H16 H16 H 0 1 N N N -13.652 7.935 -7.907 6.740 4.728 0.623 H16 7GB 50 7GB H17 H17 H 0 1 N N N -13.745 8.733 -10.227 7.786 3.484 2.471 H17 7GB 51 7GB H18 H18 H 0 1 N N N -15.734 8.291 -11.605 7.698 1.025 2.509 H18 7GB 52 7GB H19 H19 H 0 1 N N N -17.578 6.946 -10.628 6.553 -0.196 0.704 H19 7GB 53 7GB H20 H20 H 0 1 N N N -22.171 10.741 -3.151 -7.011 1.958 -1.083 H20 7GB 54 7GB H21 H21 H 0 1 N N N -16.112 4.616 -2.042 2.641 -2.648 0.131 H21 7GB 55 7GB H22 H22 H 0 1 N N N -17.123 4.482 -3.317 2.727 -4.227 0.696 H22 7GB 56 7GB H23 H23 H 0 1 N N N -19.200 8.445 -4.775 1.730 -1.475 -2.550 H23 7GB 57 7GB H24 H24 H 0 1 N N N -18.285 4.001 -6.677 4.003 1.280 0.851 H24 7GB 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7GB C33 C34 DOUB Y N 1 7GB C33 C32 SING Y N 2 7GB C34 C29 SING Y N 3 7GB C32 C31 DOUB Y N 4 7GB C29 O28 SING N N 5 7GB C29 C30 DOUB Y N 6 7GB C31 C30 SING Y N 7 7GB O28 C25 SING N N 8 7GB C25 C24 DOUB Y N 9 7GB C25 C26 SING Y N 10 7GB C24 C23 SING Y N 11 7GB C26 C27 DOUB Y N 12 7GB C23 C22 DOUB Y N 13 7GB C27 C22 SING Y N 14 7GB C22 N9 SING N N 15 7GB O10 C8 DOUB N N 16 7GB N9 C8 SING N N 17 7GB N9 C5 SING N N 18 7GB O17 C16 DOUB N N 19 7GB C8 N7 SING N N 20 7GB N21 C6 SING N N 21 7GB C18 C16 SING N N 22 7GB C18 C19 DOUB N E 23 7GB C16 N14 SING N N 24 7GB C5 C6 DOUB Y N 25 7GB C5 C4 SING Y N 26 7GB C6 N1 SING Y N 27 7GB C20 C19 SING N N 28 7GB N7 C4 SING N N 29 7GB N7 C11 SING N N 30 7GB C12 C13 SING N N 31 7GB C12 C11 SING N N 32 7GB N14 C13 SING N N 33 7GB N14 C15 SING N N 34 7GB C4 N3 DOUB Y N 35 7GB C11 C15 SING N N 36 7GB N1 C2 DOUB Y N 37 7GB N3 C2 SING Y N 38 7GB C2 H1 SING N N 39 7GB C11 H2 SING N N 40 7GB C12 H3 SING N N 41 7GB C12 H4 SING N N 42 7GB C13 H5 SING N N 43 7GB C13 H6 SING N N 44 7GB C15 H7 SING N N 45 7GB C15 H8 SING N N 46 7GB C19 H9 SING N N 47 7GB C20 H10 SING N N 48 7GB C20 H11 SING N N 49 7GB C20 H12 SING N N 50 7GB C24 H13 SING N N 51 7GB C27 H14 SING N N 52 7GB C30 H15 SING N N 53 7GB C31 H16 SING N N 54 7GB C32 H17 SING N N 55 7GB C33 H18 SING N N 56 7GB C34 H19 SING N N 57 7GB C18 H20 SING N N 58 7GB N21 H21 SING N N 59 7GB N21 H22 SING N N 60 7GB C23 H23 SING N N 61 7GB C26 H24 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7GB InChI InChI 1.03 "InChI=1S/C25H24N6O3/c1-2-6-21(32)29-14-13-18(15-29)31-24-22(23(26)27-16-28-24)30(25(31)33)17-9-11-20(12-10-17)34-19-7-4-3-5-8-19/h2-12,16,18H,13-15H2,1H3,(H2,26,27,28)/b6-2+/t18-/m1/s1" 7GB InChIKey InChI 1.03 ZHAZXTKPNSTGRP-OBNPVOHOSA-N 7GB SMILES_CANONICAL CACTVS 3.385 "C/C=C/C(=O)N1CC[C@H](C1)N2C(=O)N(c3ccc(Oc4ccccc4)cc3)c5c(N)ncnc25" 7GB SMILES CACTVS 3.385 "CC=CC(=O)N1CC[CH](C1)N2C(=O)N(c3ccc(Oc4ccccc4)cc3)c5c(N)ncnc25" 7GB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C/C=C/C(=O)N1CC[C@H](C1)N2c3c(c(ncn3)N)N(C2=O)c4ccc(cc4)Oc5ccccc5" 7GB SMILES "OpenEye OEToolkits" 2.0.6 "CC=CC(=O)N1CCC(C1)N2c3c(c(ncn3)N)N(C2=O)c4ccc(cc4)Oc5ccccc5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7GB "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-azanyl-9-[(3~{R})-1-[(~{E})-but-2-enoyl]pyrrolidin-3-yl]-7-(4-phenoxyphenyl)purin-8-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7GB "Create component" 2016-10-19 RCSB 7GB "Initial release" 2017-05-24 RCSB #