data_7I6 # _chem_comp.id 7I6 _chem_comp.name "1-(4-aminobenzyl)-3-[(2S)-4-(methylsulfanyl)-1-{(2R)-2-[2-(methylsulfanyl)phenyl]pyrrolidin-1-yl}-1-oxobutan-2-yl]urea" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H32 N4 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2013-02-15 _chem_comp.pdbx_modified_date 2014-02-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.666 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7I6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4J5C _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7I6 CAB CAB C 0 1 N N N 6.787 22.637 12.522 6.924 2.682 -2.030 CAB 7I6 1 7I6 SAW SAW S 0 1 N N N 6.880 21.819 14.046 5.975 1.232 -1.497 SAW 7I6 2 7I6 CBB CBB C 0 1 Y N N 6.732 23.065 15.256 4.907 1.889 -0.259 CBB 7I6 3 7I6 CAH CAH C 0 1 Y N N 6.598 24.396 14.917 4.959 3.241 0.059 CAH 7I6 4 7I6 CAF CAF C 0 1 Y N N 6.446 25.333 15.907 4.121 3.753 1.030 CAF 7I6 5 7I6 CAG CAG C 0 1 Y N N 6.418 24.961 17.224 3.232 2.922 1.686 CAG 7I6 6 7I6 CAI CAI C 0 1 Y N N 6.515 23.659 17.546 3.178 1.576 1.373 CAI 7I6 7 7I6 CBC CBC C 0 1 Y N N 6.674 22.666 16.603 4.008 1.058 0.398 CBC 7I6 8 7I6 CBE CBE C 0 1 N N R 6.826 21.276 16.985 3.944 -0.407 0.053 CBE 7I6 9 7I6 CAQ CAQ C 0 1 N N N 8.318 20.870 17.066 4.985 -1.188 0.883 CAQ 7I6 10 7I6 CAN CAN C 0 1 N N N 8.764 21.274 18.466 4.239 -2.504 1.227 CAN 7I6 11 7I6 CAS CAS C 0 1 N N N 7.545 20.804 19.314 2.787 -1.998 1.415 CAS 7I6 12 7I6 NBF NBF N 0 1 N N N 6.404 20.934 18.403 2.619 -0.945 0.398 NBF 7I6 13 7I6 C C C 0 1 N N N 5.173 20.592 18.815 1.446 -0.540 -0.129 C 7I6 14 7I6 O O O 0 1 N N N 4.976 20.227 19.956 1.417 0.398 -0.897 O 7I6 15 7I6 CA CA C 0 1 N N S 4.033 20.731 17.810 0.170 -1.254 0.237 CA 7I6 16 7I6 CB CB C 0 1 N N N 3.392 22.107 18.068 0.081 -2.569 -0.540 CB 7I6 17 7I6 CG CG C 0 1 N N N 2.078 22.107 17.298 -1.136 -3.363 -0.061 CG 7I6 18 7I6 SD SD S 0 1 N N N 1.794 23.668 16.488 -1.242 -4.922 -0.983 SD 7I6 19 7I6 CE CE C 0 1 N N N 1.701 24.338 18.015 -2.720 -5.709 -0.285 CE 7I6 20 7I6 N N N 0 1 N N N 3.030 19.786 18.132 -0.977 -0.408 -0.101 N 7I6 21 7I6 CAX CAX C 0 1 N N N 2.961 18.622 17.791 -2.145 -0.565 0.552 CAX 7I6 22 7I6 OAD OAD O 0 1 N N N 3.741 18.067 17.060 -2.247 -1.409 1.422 OAD 7I6 23 7I6 NAT NAT N 0 1 N N N 1.809 18.203 18.374 -3.201 0.214 0.242 NAT 7I6 24 7I6 CAP CAP C 0 1 N N N 1.184 16.986 18.401 -4.471 0.043 0.951 CAP 7I6 25 7I6 CBA CBA C 0 1 Y N N 1.076 16.489 19.757 -5.480 1.028 0.419 CBA 7I6 26 7I6 CAL CAL C 0 1 Y N N 2.092 16.671 20.685 -5.588 2.282 0.991 CAL 7I6 27 7I6 CAJ CAJ C 0 1 Y N N 1.974 16.138 21.930 -6.511 3.187 0.505 CAJ 7I6 28 7I6 CAZ CAZ C 0 1 Y N N 0.861 15.461 22.338 -7.332 2.836 -0.559 CAZ 7I6 29 7I6 NAC NAC N 0 1 N N N 0.765 14.963 23.592 -8.266 3.749 -1.053 NAC 7I6 30 7I6 CAK CAK C 0 1 Y N N -0.165 15.256 21.400 -7.221 1.575 -1.131 CAK 7I6 31 7I6 CAM CAM C 0 1 Y N N -0.012 15.750 20.130 -6.292 0.677 -0.644 CAM 7I6 32 7I6 H1 H1 H 0 1 N N N 6.874 21.904 11.706 7.629 2.390 -2.809 H1 7I6 33 7I6 H2 H2 H 0 1 N N N 5.822 23.159 12.444 6.243 3.438 -2.423 H2 7I6 34 7I6 H3 H3 H 0 1 N N N 7.606 23.368 12.448 7.470 3.092 -1.181 H3 7I6 35 7I6 H4 H4 H 0 1 N N N 6.613 24.698 13.880 5.654 3.890 -0.453 H4 7I6 36 7I6 H5 H5 H 0 1 N N N 6.347 26.376 15.645 4.161 4.804 1.277 H5 7I6 37 7I6 H6 H6 H 0 1 N N N 6.319 25.707 17.998 2.578 3.325 2.445 H6 7I6 38 7I6 H7 H7 H 0 1 N N N 6.466 23.379 18.588 2.482 0.930 1.888 H7 7I6 39 7I6 H8 H8 H 0 1 N N N 6.307 20.617 16.273 4.137 -0.546 -1.010 H8 7I6 40 7I6 H9 H9 H 0 1 N N N 8.431 19.785 16.923 5.875 -1.393 0.289 H9 7I6 41 7I6 H10 H10 H 0 1 N N N 8.905 21.404 16.304 5.243 -0.642 1.790 H10 7I6 42 7I6 H11 H11 H 0 1 N N N 9.687 20.753 18.762 4.301 -3.215 0.403 H11 7I6 43 7I6 H12 H12 H 0 1 N N N 8.915 22.361 18.544 4.623 -2.941 2.149 H12 7I6 44 7I6 H13 H13 H 0 1 N N N 7.414 21.445 20.198 2.078 -2.808 1.243 H13 7I6 45 7I6 H14 H14 H 0 1 N N N 7.672 19.759 19.634 2.655 -1.586 2.416 H14 7I6 46 7I6 H15 H15 H 0 1 N N N 4.395 20.646 16.775 0.165 -1.464 1.307 H15 7I6 47 7I6 H16 H16 H 0 1 N N N 4.049 22.910 17.703 -0.021 -2.356 -1.605 H16 7I6 48 7I6 H17 H17 H 0 1 N N N 3.205 22.247 19.143 0.985 -3.153 -0.372 H17 7I6 49 7I6 H18 H18 H 0 1 N N N 1.253 21.913 17.999 -1.034 -3.577 1.003 H18 7I6 50 7I6 H19 H19 H 0 1 N N N 2.109 21.311 16.539 -2.040 -2.779 -0.230 H19 7I6 51 7I6 H20 H20 H 0 1 N N N 1.512 25.418 17.931 -2.579 -5.863 0.785 H20 7I6 52 7I6 H21 H21 H 0 1 N N N 0.880 23.864 18.574 -3.585 -5.066 -0.448 H21 7I6 53 7I6 H22 H22 H 0 1 N N N 2.650 24.172 18.546 -2.885 -6.670 -0.773 H22 7I6 54 7I6 H23 H23 H 0 1 N N N 2.286 20.117 18.712 -0.895 0.265 -0.794 H23 7I6 55 7I6 H24 H24 H 0 1 N N N 1.326 18.918 18.879 -3.119 0.887 -0.452 H24 7I6 56 7I6 H25 H25 H 0 1 N N N 0.175 17.090 17.974 -4.839 -0.972 0.800 H25 7I6 57 7I6 H26 H26 H 0 1 N N N 1.764 16.270 17.800 -4.318 0.219 2.016 H26 7I6 58 7I6 H27 H27 H 0 1 N N N 2.974 17.235 20.419 -4.949 2.555 1.818 H27 7I6 59 7I6 H28 H28 H 0 1 N N N 2.793 16.255 22.624 -6.595 4.167 0.952 H28 7I6 60 7I6 H29 H29 H 0 1 N N N 1.583 15.208 24.112 -8.343 4.629 -0.653 H29 7I6 61 7I6 H30 H30 H 0 1 N N N -0.042 15.345 24.042 -8.839 3.503 -1.796 H30 7I6 62 7I6 H31 H31 H 0 1 N N N -1.060 14.718 21.675 -7.858 1.299 -1.958 H31 7I6 63 7I6 H32 H32 H 0 1 N N N -0.779 15.548 19.397 -6.202 -0.302 -1.091 H32 7I6 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7I6 CAB SAW SING N N 1 7I6 SAW CBB SING N N 2 7I6 CAH CBB DOUB Y N 3 7I6 CAH CAF SING Y N 4 7I6 CBB CBC SING Y N 5 7I6 CAF CAG DOUB Y N 6 7I6 SD CG SING N N 7 7I6 SD CE SING N N 8 7I6 CBC CBE SING N N 9 7I6 CBC CAI DOUB Y N 10 7I6 CBE CAQ SING N N 11 7I6 CBE NBF SING N N 12 7I6 OAD CAX DOUB N N 13 7I6 CAQ CAN SING N N 14 7I6 CAG CAI SING Y N 15 7I6 CG CB SING N N 16 7I6 CAX N SING N N 17 7I6 CAX NAT SING N N 18 7I6 CA CB SING N N 19 7I6 CA N SING N N 20 7I6 CA C SING N N 21 7I6 NAT CAP SING N N 22 7I6 CAP CBA SING N N 23 7I6 NBF C SING N N 24 7I6 NBF CAS SING N N 25 7I6 CAN CAS SING N N 26 7I6 C O DOUB N N 27 7I6 CBA CAM DOUB Y N 28 7I6 CBA CAL SING Y N 29 7I6 CAM CAK SING Y N 30 7I6 CAL CAJ DOUB Y N 31 7I6 CAK CAZ DOUB Y N 32 7I6 CAJ CAZ SING Y N 33 7I6 CAZ NAC SING N N 34 7I6 CAB H1 SING N N 35 7I6 CAB H2 SING N N 36 7I6 CAB H3 SING N N 37 7I6 CAH H4 SING N N 38 7I6 CAF H5 SING N N 39 7I6 CAG H6 SING N N 40 7I6 CAI H7 SING N N 41 7I6 CBE H8 SING N N 42 7I6 CAQ H9 SING N N 43 7I6 CAQ H10 SING N N 44 7I6 CAN H11 SING N N 45 7I6 CAN H12 SING N N 46 7I6 CAS H13 SING N N 47 7I6 CAS H14 SING N N 48 7I6 CA H15 SING N N 49 7I6 CB H16 SING N N 50 7I6 CB H17 SING N N 51 7I6 CG H18 SING N N 52 7I6 CG H19 SING N N 53 7I6 CE H20 SING N N 54 7I6 CE H21 SING N N 55 7I6 CE H22 SING N N 56 7I6 N H23 SING N N 57 7I6 NAT H24 SING N N 58 7I6 CAP H25 SING N N 59 7I6 CAP H26 SING N N 60 7I6 CAL H27 SING N N 61 7I6 CAJ H28 SING N N 62 7I6 NAC H29 SING N N 63 7I6 NAC H30 SING N N 64 7I6 CAK H31 SING N N 65 7I6 CAM H32 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7I6 SMILES ACDLabs 12.01 "O=C(N2C(c1c(SC)cccc1)CCC2)C(NC(=O)NCc3ccc(N)cc3)CCSC" 7I6 InChI InChI 1.03 "InChI=1S/C24H32N4O2S2/c1-31-15-13-20(27-24(30)26-16-17-9-11-18(25)12-10-17)23(29)28-14-5-7-21(28)19-6-3-4-8-22(19)32-2/h3-4,6,8-12,20-21H,5,7,13-16,25H2,1-2H3,(H2,26,27,30)/t20-,21+/m0/s1" 7I6 InChIKey InChI 1.03 SXQHCTVKKRKZEF-LEWJYISDSA-N 7I6 SMILES_CANONICAL CACTVS 3.370 "CSCC[C@H](NC(=O)NCc1ccc(N)cc1)C(=O)N2CCC[C@@H]2c3ccccc3SC" 7I6 SMILES CACTVS 3.370 "CSCC[CH](NC(=O)NCc1ccc(N)cc1)C(=O)N2CCC[CH]2c3ccccc3SC" 7I6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CSCC[C@@H](C(=O)N1CCC[C@@H]1c2ccccc2SC)NC(=O)NCc3ccc(cc3)N" 7I6 SMILES "OpenEye OEToolkits" 1.7.6 "CSCCC(C(=O)N1CCCC1c2ccccc2SC)NC(=O)NCc3ccc(cc3)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7I6 "SYSTEMATIC NAME" ACDLabs 12.01 "1-(4-aminobenzyl)-3-[(2S)-4-(methylsulfanyl)-1-{(2R)-2-[2-(methylsulfanyl)phenyl]pyrrolidin-1-yl}-1-oxobutan-2-yl]urea" 7I6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[(4-aminophenyl)methyl]-3-[(2S)-4-methylsulfanyl-1-[(2R)-2-(2-methylsulfanylphenyl)pyrrolidin-1-yl]-1-oxidanylidene-butan-2-yl]urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7I6 "Create component" 2013-02-15 RCSB 7I6 "Initial release" 2014-02-19 RCSB #