data_7IT # _chem_comp.id 7IT _chem_comp.name "N~1~-{(1R,2R,3S)-2-(carbamimidamidomethyl)-3-[(3S)-3,4-dihydroxybutyl]-5-[(methylamino)methyl]-2,3-dihydro-1H-inden-1-yl}-N~2~-(4-chloro-3-fluorophenyl)ethanediamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H32 Cl F N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-08-12 _chem_comp.pdbx_modified_date 2022-06-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 535.011 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7IT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RSX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7IT C10 C1 C 0 1 Y N N 32.843 -2.732 -20.908 -3.000 -0.339 -3.072 C10 7IT 1 7IT C13 C2 C 0 1 N N R 34.765 -2.792 -17.432 -1.533 1.639 -0.104 C13 7IT 2 7IT C15 C3 C 0 1 N N N 36.450 -4.611 -16.815 0.836 1.411 -0.623 C15 7IT 3 7IT C17 C4 C 0 1 N N N 36.810 -6.131 -16.550 2.193 0.853 -0.341 C17 7IT 4 7IT C20 C5 C 0 1 Y N N 38.660 -7.819 -15.821 4.518 0.729 -0.818 C20 7IT 5 7IT C21 C6 C 0 1 Y N N 38.226 -8.924 -16.593 4.699 -0.518 -0.234 C21 7IT 6 7IT C22 C7 C 0 1 Y N N 38.697 -10.184 -16.233 5.974 -0.957 0.075 C22 7IT 7 7IT C24 C8 C 0 1 Y N N 39.538 -10.342 -15.164 7.069 -0.152 -0.197 C24 7IT 8 7IT C26 C9 C 0 1 Y N N 39.953 -9.253 -14.395 6.890 1.090 -0.778 C26 7IT 9 7IT N N1 N 0 1 N N N 30.620 -3.420 -22.578 -4.123 -3.391 -3.119 N 7IT 10 7IT C C10 C 0 1 N N N 30.056 -2.940 -23.808 -4.955 -4.386 -3.808 C 7IT 11 7IT C00 C11 C 0 1 N N N 30.345 -2.507 -21.400 -4.794 -2.086 -3.070 C00 7IT 12 7IT C02 C12 C 0 1 N N N 36.618 -0.254 -15.312 -3.313 5.304 1.170 C02 7IT 13 7IT C04 C13 C 0 1 N N N 34.257 -0.994 -15.706 -3.366 2.845 1.157 C04 7IT 14 7IT C05 C14 C 0 1 N N R 34.007 -2.448 -16.181 -2.376 1.678 1.188 C05 7IT 15 7IT C06 C15 C 0 1 N N S 32.531 -2.532 -16.523 -3.119 0.326 1.140 C06 7IT 16 7IT C07 C16 C 0 1 Y N N 32.402 -2.596 -18.051 -3.203 -0.027 -0.329 C07 7IT 17 7IT C08 C17 C 0 1 Y N N 31.295 -2.518 -18.949 -4.012 -0.938 -0.988 C08 7IT 18 7IT C09 C18 C 0 1 Y N N 31.518 -2.587 -20.390 -3.912 -1.094 -2.357 C09 7IT 19 7IT C11 C19 C 0 1 Y N N 33.966 -2.807 -19.998 -2.192 0.569 -2.416 C11 7IT 20 7IT C12 C20 C 0 1 Y N N 33.748 -2.721 -18.586 -2.292 0.727 -1.044 C12 7IT 21 7IT C27 C21 C 0 1 Y N N 39.483 -7.971 -14.747 5.619 1.532 -1.090 C27 7IT 22 7IT C31 C22 C 0 1 N N N 31.574 -3.302 -15.583 -2.329 -0.741 1.899 C31 7IT 23 7IT C32 C23 C 0 1 N N N 31.165 -2.486 -14.344 -3.139 -2.038 1.946 C32 7IT 24 7IT C33 C24 C 0 1 N N S 30.390 -3.325 -13.233 -2.349 -3.106 2.705 C33 7IT 25 7IT C34 C25 C 0 1 N N N 30.170 -2.504 -11.956 -3.208 -4.362 2.861 C34 7IT 26 7IT F23 F1 F 0 1 N N N 38.302 -11.251 -16.974 6.152 -2.170 0.643 F23 7IT 27 7IT N01 N2 N 0 1 N N N 36.634 0.150 -16.489 -2.658 6.430 1.200 N01 7IT 28 7IT N03 N3 N 0 1 N N N 35.344 -0.907 -14.783 -2.630 4.111 1.190 N03 7IT 29 7IT N14 N4 N 0 1 N N N 35.102 -4.230 -17.233 -0.203 1.091 0.173 N14 7IT 30 7IT N19 N5 N 0 1 N N N 38.175 -6.428 -16.137 3.232 1.173 -1.136 N19 7IT 31 7IT N28 N6 N 0 1 N N N 37.665 -0.111 -14.592 -4.687 5.308 1.120 N28 7IT 32 7IT O16 O1 O 0 1 N N N 37.255 -3.750 -16.696 0.671 2.153 -1.569 O16 7IT 33 7IT O18 O2 O 0 1 N N N 36.014 -6.976 -16.680 2.358 0.110 0.605 O18 7IT 34 7IT O31 O3 O 0 1 N N N 29.180 -3.762 -13.693 -1.162 -3.428 1.977 O31 7IT 35 7IT O32 O4 O 0 1 N N N 29.830 -3.418 -10.876 -2.515 -5.316 3.669 O32 7IT 36 7IT CL25 CL1 CL 0 0 N N N 40.117 -12.001 -14.740 8.669 -0.704 0.192 CL25 7IT 37 7IT H1 H1 H 0 1 N N N 33.005 -2.785 -21.974 -2.917 -0.463 -4.141 H1 7IT 38 7IT H2 H2 H 0 1 N N N 35.644 -2.153 -17.599 -1.449 2.638 -0.532 H2 7IT 39 7IT H3 H3 H 0 1 N N N 37.555 -8.794 -17.429 3.846 -1.145 -0.021 H3 7IT 40 7IT H4 H4 H 0 1 N N N 40.616 -9.389 -13.553 7.745 1.716 -0.989 H4 7IT 41 7IT H5 H5 H 0 1 N N N 30.232 -4.320 -22.380 -3.876 -3.706 -2.192 H5 7IT 42 7IT H7 H7 H 0 1 N N N 30.291 -3.645 -24.619 -5.901 -4.498 -3.278 H7 7IT 43 7IT H8 H8 H 0 1 N N N 28.965 -2.854 -23.702 -5.148 -4.054 -4.828 H8 7IT 44 7IT H9 H9 H 0 1 N N N 30.481 -1.953 -24.045 -4.435 -5.343 -3.830 H9 7IT 45 7IT H10 H10 H 0 1 N N N 30.240 -1.472 -21.757 -4.985 -1.737 -4.085 H10 7IT 46 7IT H11 H11 H 0 1 N N N 29.414 -2.820 -20.904 -5.738 -2.182 -2.535 H11 7IT 47 7IT H12 H12 H 0 1 N N N 34.485 -0.369 -16.582 -3.960 2.793 0.244 H12 7IT 48 7IT H13 H13 H 0 1 N N N 33.346 -0.620 -15.216 -4.025 2.785 2.023 H13 7IT 49 7IT H14 H14 H 0 1 N N N 34.253 -3.153 -15.374 -1.735 1.740 2.068 H14 7IT 50 7IT H15 H15 H 0 1 N N N 32.214 -1.496 -16.333 -4.119 0.429 1.564 H15 7IT 51 7IT H16 H16 H 0 1 N N N 30.293 -2.408 -18.562 -4.725 -1.527 -0.430 H16 7IT 52 7IT H17 H17 H 0 1 N N N 34.967 -2.928 -20.384 -1.480 1.158 -2.975 H17 7IT 53 7IT H18 H18 H 0 1 N N N 39.776 -7.110 -14.165 5.480 2.502 -1.544 H18 7IT 54 7IT H19 H19 H 0 1 N N N 30.666 -3.565 -16.145 -1.382 -0.923 1.390 H19 7IT 55 7IT H20 H20 H 0 1 N N N 32.076 -4.221 -15.247 -2.135 -0.397 2.915 H20 7IT 56 7IT H21 H21 H 0 1 N N N 32.076 -2.071 -13.889 -4.086 -1.857 2.455 H21 7IT 57 7IT H22 H22 H 0 1 N N N 30.512 -1.664 -14.673 -3.333 -2.383 0.931 H22 7IT 58 7IT H23 H23 H 0 1 N N N 31.027 -4.184 -12.974 -2.078 -2.726 3.691 H23 7IT 59 7IT H24 H24 H 0 1 N N N 31.090 -1.956 -11.703 -4.152 -4.100 3.338 H24 7IT 60 7IT H25 H25 H 0 1 N N N 29.348 -1.789 -12.111 -3.404 -4.793 1.879 H25 7IT 61 7IT H26 H26 H 0 1 N N N 37.514 0.557 -16.733 -3.140 7.272 1.186 H26 7IT 62 7IT H27 H27 H 0 1 N N N 35.274 -1.253 -13.847 -1.661 4.108 1.226 H27 7IT 63 7IT H28 H28 H 0 1 N N N 34.407 -4.933 -17.385 -0.071 0.498 0.929 H28 7IT 64 7IT H29 H29 H 0 1 N N N 38.823 -5.670 -16.059 3.088 1.711 -1.930 H29 7IT 65 7IT H30 H30 H 0 1 N N N 37.668 -0.433 -13.645 -5.174 4.470 1.098 H30 7IT 66 7IT H31 H31 H 0 1 N N N 38.480 0.322 -14.976 -5.169 6.150 1.106 H31 7IT 67 7IT H32 H32 H 0 1 N N N 28.742 -4.258 -13.011 -1.327 -3.773 1.089 H32 7IT 68 7IT H33 H33 H 0 1 N N N 29.690 -2.925 -10.076 -3.002 -6.140 3.810 H33 7IT 69 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7IT C N SING N N 1 7IT N C00 SING N N 2 7IT C00 C09 SING N N 3 7IT C10 C09 DOUB Y N 4 7IT C10 C11 SING Y N 5 7IT C09 C08 SING Y N 6 7IT C11 C12 DOUB Y N 7 7IT C08 C07 DOUB Y N 8 7IT C12 C07 SING Y N 9 7IT C12 C13 SING N N 10 7IT C07 C06 SING N N 11 7IT C13 N14 SING N N 12 7IT C13 C05 SING N N 13 7IT N14 C15 SING N N 14 7IT F23 C22 SING N N 15 7IT C15 O16 DOUB N N 16 7IT C15 C17 SING N N 17 7IT O18 C17 DOUB N N 18 7IT C21 C22 DOUB Y N 19 7IT C21 C20 SING Y N 20 7IT C17 N19 SING N N 21 7IT C06 C05 SING N N 22 7IT C06 C31 SING N N 23 7IT N01 C02 DOUB N N 24 7IT C22 C24 SING Y N 25 7IT C05 C04 SING N N 26 7IT N19 C20 SING N N 27 7IT C20 C27 DOUB Y N 28 7IT C04 N03 SING N N 29 7IT C31 C32 SING N N 30 7IT C02 N03 SING N N 31 7IT C02 N28 SING N N 32 7IT C24 CL25 SING N N 33 7IT C24 C26 DOUB Y N 34 7IT C27 C26 SING Y N 35 7IT C32 C33 SING N N 36 7IT O31 C33 SING N N 37 7IT C33 C34 SING N N 38 7IT C34 O32 SING N N 39 7IT C10 H1 SING N N 40 7IT C13 H2 SING N N 41 7IT C21 H3 SING N N 42 7IT C26 H4 SING N N 43 7IT N H5 SING N N 44 7IT C H7 SING N N 45 7IT C H8 SING N N 46 7IT C H9 SING N N 47 7IT C00 H10 SING N N 48 7IT C00 H11 SING N N 49 7IT C04 H12 SING N N 50 7IT C04 H13 SING N N 51 7IT C05 H14 SING N N 52 7IT C06 H15 SING N N 53 7IT C08 H16 SING N N 54 7IT C11 H17 SING N N 55 7IT C27 H18 SING N N 56 7IT C31 H19 SING N N 57 7IT C31 H20 SING N N 58 7IT C32 H21 SING N N 59 7IT C32 H22 SING N N 60 7IT C33 H23 SING N N 61 7IT C34 H24 SING N N 62 7IT C34 H25 SING N N 63 7IT N01 H26 SING N N 64 7IT N03 H27 SING N N 65 7IT N14 H28 SING N N 66 7IT N19 H29 SING N N 67 7IT N28 H30 SING N N 68 7IT N28 H31 SING N N 69 7IT O31 H32 SING N N 70 7IT O32 H33 SING N N 71 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7IT SMILES ACDLabs 12.01 "Clc1ccc(cc1F)NC(=O)C(=O)NC1c2ccc(cc2C(CCC(O)CO)C1CNC(=N)N)CNC" 7IT InChI InChI 1.03 "InChI=1S/C25H32ClFN6O4/c1-30-10-13-2-5-17-18(8-13)16(6-4-15(35)12-34)19(11-31-25(28)29)22(17)33-24(37)23(36)32-14-3-7-20(26)21(27)9-14/h2-3,5,7-9,15-16,19,22,30,34-35H,4,6,10-12H2,1H3,(H,32,36)(H,33,37)(H4,28,29,31)/t15-,16+,19-,22-/m0/s1" 7IT InChIKey InChI 1.03 FZJJRAXEHQBZEC-BXYJTDFISA-N 7IT SMILES_CANONICAL CACTVS 3.385 "CNCc1ccc2[C@H](NC(=O)C(=O)Nc3ccc(Cl)c(F)c3)[C@@H](CNC(N)=N)[C@H](CC[C@H](O)CO)c2c1" 7IT SMILES CACTVS 3.385 "CNCc1ccc2[CH](NC(=O)C(=O)Nc3ccc(Cl)c(F)c3)[CH](CNC(N)=N)[CH](CC[CH](O)CO)c2c1" 7IT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NC[C@H]1[C@@H](c2cc(ccc2[C@@H]1NC(=O)C(=O)Nc3ccc(c(c3)F)Cl)CNC)CC[C@@H](CO)O" 7IT SMILES "OpenEye OEToolkits" 2.0.7 "CNCc1ccc2c(c1)C(C(C2NC(=O)C(=O)Nc3ccc(c(c3)F)Cl)CNC(=N)N)CCC(CO)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7IT "SYSTEMATIC NAME" ACDLabs 12.01 "N~1~-{(1R,2R,3S)-2-(carbamimidamidomethyl)-3-[(3S)-3,4-dihydroxybutyl]-5-[(methylamino)methyl]-2,3-dihydro-1H-inden-1-yl}-N~2~-(4-chloro-3-fluorophenyl)ethanediamide" 7IT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}'-[(1~{R},2~{R},3~{S})-3-[(3~{S})-3,4-bis(oxidanyl)butyl]-2-(carbamimidamidomethyl)-5-(methylaminomethyl)-2,3-dihydro-1~{H}-inden-1-yl]-~{N}-(4-chloranyl-3-fluoranyl-phenyl)ethanediamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7IT "Create component" 2021-08-12 RCSB 7IT "Initial release" 2022-06-08 RCSB ##