data_7LN # _chem_comp.id 7LN _chem_comp.name "N,N''-{[(2S)-3-aminopropane-1,2-diyl]bis(oxymethanediylbenzene-3,1-diyl)}dithiophene-2-carboximidamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H29 N5 O2 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-06-17 _chem_comp.pdbx_modified_date 2014-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 519.681 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7LN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4UPN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7LN N26 N26 N 0 1 N N N 25.356 7.514 53.325 6.971 -1.696 1.479 N26 7LN 1 7LN C26 C26 C 0 1 N N N 24.108 7.044 53.414 7.047 -1.032 0.355 C26 7LN 2 7LN C25 C25 C 0 1 Y N N 23.701 6.123 52.311 8.281 -1.075 -0.444 C25 7LN 3 7LN S21 S21 S 0 1 Y N N 24.963 5.117 51.677 8.538 -0.241 -1.969 S21 7LN 4 7LN C22 C22 C 0 1 Y N N 23.979 4.415 50.451 10.124 -0.856 -2.093 C22 7LN 5 7LN C23 C23 C 0 1 Y N N 22.725 4.986 50.513 10.418 -1.634 -1.047 C23 7LN 6 7LN C24 C24 C 0 1 Y N N 22.557 5.951 51.537 9.411 -1.764 -0.116 C24 7LN 7 7LN N27 N27 N 0 1 N N N 23.488 7.540 54.501 5.966 -0.290 -0.082 N27 7LN 8 7LN C31 C31 C 0 1 Y N N 22.232 8.098 54.573 4.753 -0.349 0.609 C31 7LN 9 7LN C36 C36 C 0 1 Y N N 21.049 7.355 54.502 4.003 0.805 0.798 C36 7LN 10 7LN C32 C32 C 0 1 Y N N 22.149 9.487 54.705 4.291 -1.561 1.104 C32 7LN 11 7LN C33 C33 C 0 1 Y N N 20.920 10.132 54.733 3.091 -1.616 1.785 C33 7LN 12 7LN C34 C34 C 0 1 Y N N 19.748 9.404 54.654 2.349 -0.465 1.975 C34 7LN 13 7LN C35 C35 C 0 1 Y N N 19.824 8.025 54.542 2.804 0.744 1.480 C35 7LN 14 7LN C37 C37 C 0 1 N N N 18.528 7.273 54.481 1.990 1.996 1.685 C37 7LN 15 7LN O38 O38 O 0 1 N N N 18.457 6.367 55.602 1.085 2.160 0.592 O38 7LN 16 7LN C20 C20 C 0 1 N N S 17.942 5.051 55.273 0.187 3.262 0.741 C20 7LN 17 7LN C21 C21 C 0 1 N N N 18.649 4.272 54.138 -0.246 3.757 -0.640 C21 7LN 18 7LN N22 N22 N 0 1 N N N 17.935 3.092 53.654 0.916 4.312 -1.348 N22 7LN 19 7LN C19 C19 C 0 1 N N N 18.095 4.247 56.544 -1.044 2.812 1.531 C19 7LN 20 7LN O18 O18 O 0 1 N N N 16.848 4.347 57.239 -1.765 1.837 0.775 O18 7LN 21 7LN C17 C17 C 0 1 N N N 16.658 3.171 57.989 -2.940 1.349 1.426 C17 7LN 22 7LN C15 C15 C 0 1 Y N N 15.162 2.906 58.119 -3.617 0.331 0.545 C15 7LN 23 7LN C14 C14 C 0 1 Y N N 14.298 3.981 58.266 -3.281 -1.007 0.651 C14 7LN 24 7LN C13 C13 C 0 1 Y N N 12.893 3.746 58.427 -3.898 -1.948 -0.154 C13 7LN 25 7LN C12 C12 C 0 1 Y N N 12.479 2.423 58.429 -4.852 -1.558 -1.070 C12 7LN 26 7LN C16 C16 C 0 1 Y N N 14.721 1.582 58.140 -4.573 0.735 -0.362 C16 7LN 27 7LN C11 C11 C 0 1 Y N N 13.333 1.337 58.282 -5.197 -0.209 -1.183 C11 7LN 28 7LN N07 N07 N 0 1 N N N 12.970 0.031 58.444 -6.142 0.185 -2.088 N07 7LN 29 7LN C06 C06 C 0 1 N N N 12.065 -0.409 59.280 -7.395 -0.185 -1.935 C06 7LN 30 7LN N06 N06 N 0 1 N N N 11.362 -1.515 59.029 -8.320 0.082 -2.923 N06 7LN 31 7LN C05 C05 C 0 1 Y N N 11.725 0.385 60.470 -7.810 -0.883 -0.712 C05 7LN 32 7LN S01 S01 S 0 1 Y N N 10.023 0.375 60.868 -6.814 -1.110 0.719 S01 7LN 33 7LN C02 C02 C 0 1 Y N N 10.354 1.381 62.252 -8.066 -1.954 1.513 C02 7LN 34 7LN C03 C03 C 0 1 Y N N 11.846 1.571 62.374 -9.150 -2.047 0.735 C03 7LN 35 7LN C04 C04 C 0 1 Y N N 12.558 1.019 61.361 -9.031 -1.455 -0.502 C04 7LN 36 7LN H26 H26 H 0 1 N N N 25.577 8.135 54.077 6.194 -1.596 2.050 H26 7LN 37 7LN H27 H27 H 0 1 N N N 24.001 7.498 55.358 6.050 0.271 -0.868 H27 7LN 38 7LN H24 H24 H 0 1 N N N 21.639 6.495 51.700 9.506 -2.356 0.782 H24 7LN 39 7LN H22 H22 H 0 1 N N N 24.291 3.655 49.751 10.800 -0.646 -2.909 H22 7LN 40 7LN H23 H23 H 0 1 N N N 21.931 4.718 49.832 11.376 -2.120 -0.937 H23 7LN 41 7LN H36 H36 H 0 1 N N N 21.082 6.279 54.417 4.357 1.750 0.411 H36 7LN 42 7LN H32 H32 H 0 1 N N N 23.056 10.068 54.787 4.869 -2.461 0.955 H32 7LN 43 7LN H33 H33 H 0 1 N N N 20.880 11.208 54.817 2.731 -2.559 2.170 H33 7LN 44 7LN H34 H34 H 0 1 N N N 18.790 9.901 54.679 1.411 -0.510 2.508 H34 7LN 45 7LN H371 H371 H 0 0 N N N 17.688 7.982 54.526 1.426 1.914 2.615 H371 7LN 46 7LN H372 H372 H 0 0 N N N 18.477 6.702 53.542 2.655 2.857 1.739 H372 7LN 47 7LN H20 H20 H 0 1 N N N 16.872 5.125 55.027 0.687 4.069 1.276 H20 7LN 48 7LN H211 H211 H 0 0 N N N 18.787 4.958 53.289 -0.657 2.926 -1.212 H211 7LN 49 7LN H212 H212 H 0 0 N N N 19.632 3.946 54.510 -1.006 4.531 -0.527 H212 7LN 50 7LN H191 H191 H 0 0 N N N 18.314 3.196 56.305 -0.729 2.377 2.479 H191 7LN 51 7LN H192 H192 H 0 0 N N N 18.908 4.660 57.160 -1.687 3.672 1.721 H192 7LN 52 7LN H221 H221 H 0 0 N N N 18.465 2.656 52.926 1.623 3.607 -1.488 H221 7LN 53 7LN H222 H222 H 0 0 N N N 17.810 2.446 54.407 0.640 4.728 -2.225 H222 7LN 54 7LN H171 H171 H 0 0 N N N 17.140 2.325 57.478 -2.663 0.883 2.373 H171 7LN 55 7LN H172 H172 H 0 0 N N N 17.100 3.295 58.989 -3.622 2.178 1.615 H172 7LN 56 7LN H14 H14 H 0 1 N N N 14.682 4.990 58.259 -2.534 -1.319 1.367 H14 7LN 57 7LN H16 H16 H 0 1 N N N 15.421 0.764 58.050 -4.837 1.780 -0.442 H16 7LN 58 7LN H13 H13 H 0 1 N N N 12.192 4.559 58.541 -3.631 -2.991 -0.065 H13 7LN 59 7LN H12 H12 H 0 1 N N N 11.425 2.224 58.553 -5.332 -2.294 -1.698 H12 7LN 60 7LN H061 H061 H 0 0 N N N 10.622 -1.788 59.644 -8.046 0.543 -3.731 H061 7LN 61 7LN H062 H062 H 0 0 N N N 11.575 -2.071 58.226 -9.243 -0.191 -2.810 H062 7LN 62 7LN H04 H04 H 0 1 N N N 13.633 1.070 61.267 -9.825 -1.447 -1.234 H04 7LN 63 7LN H02 H02 H 0 1 N N N 9.612 1.800 62.915 -7.994 -2.361 2.512 H02 7LN 64 7LN H03 H03 H 0 1 N N N 12.306 2.100 63.196 -10.052 -2.546 1.056 H03 7LN 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7LN N26 C26 DOUB N N 1 7LN C26 C25 SING N N 2 7LN C26 N27 SING N N 3 7LN C25 S21 SING Y N 4 7LN C25 C24 DOUB Y N 5 7LN S21 C22 SING Y N 6 7LN C22 C23 DOUB Y N 7 7LN C23 C24 SING Y N 8 7LN N27 C31 SING N N 9 7LN C31 C36 SING Y N 10 7LN C31 C32 DOUB Y N 11 7LN C36 C35 DOUB Y N 12 7LN C32 C33 SING Y N 13 7LN C33 C34 DOUB Y N 14 7LN C34 C35 SING Y N 15 7LN C35 C37 SING N N 16 7LN C37 O38 SING N N 17 7LN O38 C20 SING N N 18 7LN C20 C21 SING N N 19 7LN C20 C19 SING N N 20 7LN C21 N22 SING N N 21 7LN C19 O18 SING N N 22 7LN O18 C17 SING N N 23 7LN C17 C15 SING N N 24 7LN C15 C14 SING Y N 25 7LN C15 C16 DOUB Y N 26 7LN C14 C13 DOUB Y N 27 7LN C13 C12 SING Y N 28 7LN C12 C11 DOUB Y N 29 7LN C16 C11 SING Y N 30 7LN C11 N07 SING N N 31 7LN N07 C06 DOUB N N 32 7LN C06 N06 SING N N 33 7LN C06 C05 SING N N 34 7LN C05 S01 SING Y N 35 7LN C05 C04 DOUB Y N 36 7LN S01 C02 SING Y N 37 7LN C02 C03 DOUB Y N 38 7LN C03 C04 SING Y N 39 7LN N26 H26 SING N N 40 7LN N27 H27 SING N N 41 7LN C24 H24 SING N N 42 7LN C22 H22 SING N N 43 7LN C23 H23 SING N N 44 7LN C36 H36 SING N N 45 7LN C32 H32 SING N N 46 7LN C33 H33 SING N N 47 7LN C34 H34 SING N N 48 7LN C37 H371 SING N N 49 7LN C37 H372 SING N N 50 7LN C20 H20 SING N N 51 7LN C21 H211 SING N N 52 7LN C21 H212 SING N N 53 7LN C19 H191 SING N N 54 7LN C19 H192 SING N N 55 7LN N22 H221 SING N N 56 7LN N22 H222 SING N N 57 7LN C17 H171 SING N N 58 7LN C17 H172 SING N N 59 7LN C14 H14 SING N N 60 7LN C16 H16 SING N N 61 7LN C13 H13 SING N N 62 7LN C12 H12 SING N N 63 7LN N06 H061 SING N N 64 7LN N06 H062 SING N N 65 7LN C04 H04 SING N N 66 7LN C02 H02 SING N N 67 7LN C03 H03 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7LN SMILES ACDLabs 12.01 "N(/c1cc(ccc1)COCC(OCc3cccc(NC(=[N@H])c2sccc2)c3)CN)=C(\N)c4sccc4" 7LN InChI InChI 1.03 "InChI=1S/C27H29N5O2S2/c28-15-23(34-17-20-6-2-8-22(14-20)32-27(30)25-10-4-12-36-25)18-33-16-19-5-1-7-21(13-19)31-26(29)24-9-3-11-35-24/h1-14,23H,15-18,28H2,(H2,29,31)(H2,30,32)/t23-/m0/s1" 7LN InChIKey InChI 1.03 KEUPBLDQGUHFOB-QHCPKHFHSA-N 7LN SMILES_CANONICAL CACTVS 3.385 "NC[C@@H](COCc1cccc(c1)N=C(N)c2sccc2)OCc3cccc(NC(=N)c4sccc4)c3" 7LN SMILES CACTVS 3.385 "NC[CH](COCc1cccc(c1)N=C(N)c2sccc2)OCc3cccc(NC(=N)c4sccc4)c3" 7LN SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(cc(c1)NC(=N)c2cccs2)CO[C@@H](CN)COCc3cccc(c3)/N=C(\c4cccs4)/N" 7LN SMILES "OpenEye OEToolkits" 1.7.6 "c1cc(cc(c1)NC(=N)c2cccs2)COC(CN)COCc3cccc(c3)N=C(c4cccs4)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7LN "SYSTEMATIC NAME" ACDLabs 12.01 "N,N''-{[(2S)-3-aminopropane-1,2-diyl]bis(oxymethanediylbenzene-3,1-diyl)}dithiophene-2-carboximidamide" 7LN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N'-[3-[[(2S)-3-azanyl-2-[[3-[(C-thiophen-2-ylcarbonimidoyl)amino]phenyl]methoxy]propoxy]methyl]phenyl]thiophene-2-carboximidamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7LN "Create component" 2014-06-17 EBI 7LN "Initial release" 2014-08-20 RCSB #