data_7NC # _chem_comp.id 7NC _chem_comp.name "4-methyl-2-(2-naphthalen-1-yl-2-oxidanylidene-ethyl)sulfanyl-1~{H}-pyrimidin-6-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H14 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-12-01 _chem_comp.pdbx_modified_date 2017-09-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 310.370 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7NC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5WQK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7NC O1 O1 O 0 1 N N N -12.952 -5.747 14.689 -1.230 -1.758 0.143 O1 7NC 1 7NC C2 C1 C 0 1 N N N -12.037 -6.457 14.222 -1.029 -0.563 0.097 C2 7NC 2 7NC C3 C2 C 0 1 N N N -10.734 -6.581 14.966 0.382 -0.038 0.050 C3 7NC 3 7NC S S1 S 0 1 N N N -10.683 -5.388 16.250 1.544 -1.426 0.076 S 7NC 4 7NC C4 C3 C 0 1 N N N -10.147 -3.967 15.427 3.070 -0.548 0.015 C4 7NC 5 7NC N1 N1 N 0 1 N N N -10.268 -2.751 15.968 4.242 -1.242 0.017 N1 7NC 6 7NC C7 C4 C 0 1 N N N -9.876 -1.648 15.372 5.416 -0.576 -0.031 C7 7NC 7 7NC O O2 O 0 1 N N N -10.095 -0.521 15.895 6.475 -1.182 -0.030 O 7NC 8 7NC C6 C5 C 0 1 N N N -9.289 -1.760 14.132 5.394 0.828 -0.081 C6 7NC 9 7NC N N2 N 0 1 N N N -9.552 -4.107 14.230 3.059 0.770 -0.037 N 7NC 10 7NC C5 C6 C 0 1 N N N -9.142 -2.998 13.597 4.189 1.471 -0.080 C5 7NC 11 7NC C8 C7 C 0 1 N N N -8.422 -3.125 12.299 4.140 2.976 -0.133 C8 7NC 12 7NC C1 C8 C 0 1 Y N N -12.222 -7.123 12.895 -2.160 0.371 0.079 C1 7NC 13 7NC C11 C9 C 0 1 Y N N -11.120 -7.509 12.138 -1.949 1.745 0.144 C11 7NC 14 7NC C12 C10 C 0 1 Y N N -11.239 -8.204 10.938 -3.021 2.625 0.127 C12 7NC 15 7NC C10 C11 C 0 1 Y N N -12.486 -8.477 10.388 -4.308 2.188 0.049 C10 7NC 16 7NC C9 C12 C 0 1 Y N N -13.654 -8.159 11.065 -4.598 0.814 -0.019 C9 7NC 17 7NC C16 C13 C 0 1 Y N N -14.885 -8.488 10.506 -5.921 0.350 -0.099 C16 7NC 18 7NC C15 C14 C 0 1 Y N N -16.011 -8.157 11.254 -6.162 -0.990 -0.163 C15 7NC 19 7NC C14 C15 C 0 1 Y N N -15.981 -7.452 12.446 -5.115 -1.907 -0.150 C14 7NC 20 7NC C13 C16 C 0 1 Y N N -14.781 -7.138 13.060 -3.819 -1.490 -0.072 C13 7NC 21 7NC C C17 C 0 1 Y N N -13.593 -7.440 12.373 -3.535 -0.122 -0.012 C 7NC 22 7NC H1 H1 H 0 1 N N N -10.652 -7.589 15.398 0.526 0.539 -0.864 H1 7NC 23 7NC H2 H2 H 0 1 N N N -9.897 -6.410 14.273 0.561 0.602 0.914 H2 7NC 24 7NC H3 H3 H 0 1 N N N -8.954 -0.883 13.598 6.316 1.390 -0.119 H3 7NC 25 7NC H5 H5 H 0 1 N N N -8.327 -4.188 12.034 4.108 3.302 -1.172 H5 7NC 26 7NC H6 H6 H 0 1 N N N -8.986 -2.601 11.514 3.249 3.328 0.387 H6 7NC 27 7NC H7 H7 H 0 1 N N N -7.420 -2.679 12.390 5.027 3.386 0.349 H7 7NC 28 7NC H8 H8 H 0 1 N N N -10.132 -7.259 12.496 -0.941 2.130 0.207 H8 7NC 29 7NC H9 H9 H 0 1 N N N -10.348 -8.537 10.426 -2.830 3.687 0.178 H9 7NC 30 7NC H10 H10 H 0 1 N N N -12.546 -8.945 9.417 -5.116 2.905 0.039 H10 7NC 31 7NC H11 H11 H 0 1 N N N -14.962 -8.974 9.544 -6.743 1.050 -0.110 H11 7NC 32 7NC H12 H12 H 0 1 N N N -16.974 -8.471 10.879 -7.180 -1.345 -0.225 H12 7NC 33 7NC H13 H13 H 0 1 N N N -16.909 -7.142 12.904 -5.332 -2.964 -0.201 H13 7NC 34 7NC H14 H14 H 0 1 N N N -14.758 -6.676 14.036 -3.016 -2.212 -0.062 H14 7NC 35 7NC H16 H16 H 0 1 N N N -10.680 -2.677 16.876 4.234 -2.212 0.052 H16 7NC 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7NC C10 C12 DOUB Y N 1 7NC C10 C9 SING Y N 2 7NC C16 C9 DOUB Y N 3 7NC C16 C15 SING Y N 4 7NC C12 C11 SING Y N 5 7NC C9 C SING Y N 6 7NC C15 C14 DOUB Y N 7 7NC C11 C1 DOUB Y N 8 7NC C8 C5 SING N N 9 7NC C C1 SING Y N 10 7NC C C13 DOUB Y N 11 7NC C14 C13 SING Y N 12 7NC C1 C2 SING N N 13 7NC C5 C6 DOUB N N 14 7NC C5 N SING N N 15 7NC C6 C7 SING N N 16 7NC C2 O1 DOUB N N 17 7NC C2 C3 SING N N 18 7NC N C4 DOUB N N 19 7NC C3 S SING N N 20 7NC C7 O DOUB N N 21 7NC C7 N1 SING N N 22 7NC C4 N1 SING N N 23 7NC C4 S SING N N 24 7NC C3 H1 SING N N 25 7NC C3 H2 SING N N 26 7NC C6 H3 SING N N 27 7NC C8 H5 SING N N 28 7NC C8 H6 SING N N 29 7NC C8 H7 SING N N 30 7NC C11 H8 SING N N 31 7NC C12 H9 SING N N 32 7NC C10 H10 SING N N 33 7NC C16 H11 SING N N 34 7NC C15 H12 SING N N 35 7NC C14 H13 SING N N 36 7NC C13 H14 SING N N 37 7NC N1 H16 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7NC InChI InChI 1.03 "InChI=1S/C17H14N2O2S/c1-11-9-16(21)19-17(18-11)22-10-15(20)14-8-4-6-12-5-2-3-7-13(12)14/h2-9H,10H2,1H3,(H,18,19,21)" 7NC InChIKey InChI 1.03 KKPLVAUVHOSUPR-UHFFFAOYSA-N 7NC SMILES_CANONICAL CACTVS 3.385 "CC1=CC(=O)NC(=N1)SCC(=O)c2cccc3ccccc23" 7NC SMILES CACTVS 3.385 "CC1=CC(=O)NC(=N1)SCC(=O)c2cccc3ccccc23" 7NC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC1=CC(=O)NC(=N1)SCC(=O)c2cccc3c2cccc3" 7NC SMILES "OpenEye OEToolkits" 2.0.6 "CC1=CC(=O)NC(=N1)SCC(=O)c2cccc3c2cccc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7NC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "4-methyl-2-(2-naphthalen-1-yl-2-oxidanylidene-ethyl)sulfanyl-1~{H}-pyrimidin-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7NC "Create component" 2016-12-01 PDBJ 7NC "Initial release" 2017-09-06 RCSB #