data_7NL # _chem_comp.id 7NL _chem_comp.name "4-(4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-8-fluoro-2-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-7-yl)naphthalen-2-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H32 F2 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-08-13 _chem_comp.pdbx_modified_date 2021-12-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 558.622 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7NL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RT2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7NL C1 C1 C 0 1 Y N N 2.533 3.134 -24.902 0.818 -1.646 0.285 C1 7NL 1 7NL C2 C2 C 0 1 Y N N 1.715 4.204 -24.531 0.649 -0.237 0.284 C2 7NL 2 7NL C4 C3 C 0 1 Y N N 3.566 5.286 -23.738 -1.634 -0.537 0.215 C4 7NL 3 7NL C6 C4 C 0 1 Y N N 3.894 3.209 -24.555 -0.341 -2.458 0.248 C6 7NL 4 7NL C7 C5 C 0 1 Y N N 1.882 2.103 -25.607 2.110 -2.179 0.327 C7 7NL 5 7NL C10 C6 C 0 1 Y N N 0.371 4.111 -24.816 1.798 0.569 0.320 C10 7NL 6 7NL C13 C7 C 0 1 N N R 6.865 1.602 -23.516 -2.380 -4.208 1.379 C13 7NL 7 7NL C14 C8 C 0 1 N N N 6.200 2.315 -24.714 -0.857 -4.405 1.453 C14 7NL 8 7NL C16 C9 C 0 1 N N N 4.267 0.744 -24.406 -0.820 -4.401 -0.978 C16 7NL 9 7NL C17 C10 C 0 1 N N S 5.089 0.131 -23.240 -2.371 -4.209 -0.951 C17 7NL 10 7NL C19 C11 C 0 1 N N N 6.183 2.040 -22.219 -2.644 -2.736 0.984 C19 7NL 11 7NL C20 C12 C 0 1 N N N 5.063 1.028 -21.987 -2.637 -2.737 -0.559 C20 7NL 12 7NL C21 C13 C 0 1 Y N N -1.663 3.014 -25.741 4.263 0.780 0.394 C21 7NL 13 7NL C22 C14 C 0 1 N N N 5.491 6.485 -22.910 -2.951 1.438 0.182 C22 7NL 14 7NL C23 C15 C 0 1 N N S 5.787 7.958 -22.656 -4.419 1.867 0.139 C23 7NL 15 7NL C25 C16 C 0 1 N N N 4.506 9.662 -23.704 -5.288 3.751 -1.066 C25 7NL 16 7NL C26 C17 C 0 1 N N R 4.415 9.912 -22.181 -5.069 2.560 -2.088 C26 7NL 17 7NL C27 C18 C 0 1 N N N 4.857 8.582 -21.631 -5.108 1.337 -1.134 C27 7NL 18 7NL C28 C19 C 0 1 N N N 6.941 9.394 -24.147 -5.277 3.748 1.353 C28 7NL 19 7NL C29 C20 C 0 1 N N N 7.279 8.029 -22.251 -5.178 1.347 1.377 C29 7NL 20 7NL C30 C21 C 0 1 N N N 7.978 8.484 -23.524 -6.140 2.515 1.718 C30 7NL 21 7NL C31 C22 C 0 1 Y N N -2.641 2.986 -24.687 5.328 0.524 -0.502 C31 7NL 22 7NL C32 C23 C 0 1 Y N N -4.009 2.943 -25.114 6.492 1.330 -0.451 C32 7NL 23 7NL C33 C24 C 0 1 Y N N -4.388 2.960 -26.507 6.573 2.372 0.487 C33 7NL 24 7NL C34 C25 C 0 1 Y N N -3.399 2.986 -27.453 5.524 2.603 1.349 C34 7NL 25 7NL C35 C26 C 0 1 Y N N -2.031 3.027 -27.027 4.372 1.818 1.302 C35 7NL 26 7NL C36 C27 C 0 1 Y N N -2.319 2.969 -23.315 5.252 -0.516 -1.441 C36 7NL 27 7NL C37 C28 C 0 1 Y N N -3.277 2.902 -22.334 6.294 -0.738 -2.289 C37 7NL 28 7NL C38 C29 C 0 1 Y N N -4.608 2.892 -22.790 7.439 0.054 -2.240 C38 7NL 29 7NL C39 C30 C 0 1 Y N N -4.969 2.901 -24.062 7.548 1.072 -1.343 C39 7NL 30 7NL C9 C31 C 0 1 Y N N -0.229 3.088 -25.465 3.039 -0.051 0.355 C9 7NL 31 7NL F12 F1 F 0 1 N N N -0.412 5.208 -24.381 1.697 1.916 0.321 F12 7NL 32 7NL N15 N1 N 0 1 N N N 4.726 2.128 -24.811 -0.242 -3.832 0.248 N15 7NL 33 7NL N18 N2 N 0 1 N N N 6.507 0.162 -23.569 -2.877 -4.988 0.212 N18 7NL 34 7NL N24 N3 N 0 1 N N N 5.657 8.706 -23.918 -4.536 3.341 0.140 N24 7NL 35 7NL N3 N4 N 0 1 Y N N 2.265 5.316 -23.952 -0.589 0.268 0.249 N3 7NL 36 7NL N5 N5 N 0 1 Y N N 4.443 4.318 -24.059 -1.524 -1.860 0.215 N5 7NL 37 7NL N8 N6 N 0 1 Y N N 0.606 2.097 -25.907 3.152 -1.381 0.360 N8 7NL 38 7NL O11 O1 O 0 1 N N N 4.092 6.433 -23.270 -2.872 0.011 0.180 O11 7NL 39 7NL O34 O2 O 0 1 N N N -3.673 2.987 -28.778 5.608 3.617 2.250 O34 7NL 40 7NL F262 F2 F 0 0 N N N 5.382 10.898 -21.954 -6.107 2.507 -3.025 F262 7NL 41 7NL H1 H1 H 0 1 N N N 2.476 1.258 -25.923 2.251 -3.250 0.333 H1 7NL 42 7NL H2 H2 H 0 1 N N N 7.952 1.771 -23.490 -2.879 -4.485 2.308 H2 7NL 43 7NL H3 H3 H 0 1 N N N 6.656 1.929 -25.638 -0.467 -3.901 2.337 H3 7NL 44 7NL H4 H4 H 0 1 N N N 6.403 3.393 -24.627 -0.629 -5.470 1.510 H4 7NL 45 7NL H5 H5 H 0 1 N N N 3.214 0.805 -24.094 -0.585 -5.464 -1.029 H5 7NL 46 7NL H6 H6 H 0 1 N N N 4.354 0.080 -25.279 -0.405 -3.894 -1.849 H6 7NL 47 7NL H7 H7 H 0 1 N N N 4.737 -0.884 -23.005 -2.839 -4.486 -1.895 H7 7NL 48 7NL H8 H8 H 0 1 N N N 6.898 2.021 -21.383 -3.614 -2.410 1.360 H8 7NL 49 7NL H9 H9 H 0 1 N N N 5.770 3.054 -22.325 -1.852 -2.093 1.367 H9 7NL 50 7NL H10 H10 H 0 1 N N N 4.092 1.537 -21.893 -1.842 -2.093 -0.936 H10 7NL 51 7NL H11 H11 H 0 1 N N N 5.256 0.436 -21.080 -3.604 -2.411 -0.943 H11 7NL 52 7NL H12 H12 H 0 1 N N N 5.677 5.893 -22.002 -2.432 1.831 -0.692 H12 7NL 53 7NL H13 H13 H 0 1 N N N 6.115 6.103 -23.732 -2.485 1.826 1.087 H13 7NL 54 7NL H14 H14 H 0 1 N N N 4.695 10.608 -24.233 -4.879 4.677 -1.469 H14 7NL 55 7NL H15 H15 H 0 1 N N N 3.570 9.217 -24.072 -6.349 3.870 -0.845 H15 7NL 56 7NL H16 H16 H 0 1 N N N 3.398 10.187 -21.866 -4.102 2.644 -2.584 H16 7NL 57 7NL H17 H17 H 0 1 N N N 3.984 7.932 -21.469 -4.550 0.502 -1.556 H17 7NL 58 7NL H18 H18 H 0 1 N N N 5.388 8.726 -20.679 -6.137 1.046 -0.923 H18 7NL 59 7NL H19 H19 H 0 1 N N N 7.129 9.517 -25.224 -5.913 4.607 1.139 H19 7NL 60 7NL H20 H20 H 0 1 N N N 6.946 10.380 -23.659 -4.584 3.979 2.162 H20 7NL 61 7NL H21 H21 H 0 1 N N N 7.646 7.042 -21.933 -5.739 0.445 1.133 H21 7NL 62 7NL H22 H22 H 0 1 N N N 7.431 8.756 -21.439 -4.489 1.160 2.200 H22 7NL 63 7NL H23 H23 H 0 1 N N N 8.207 7.631 -24.180 -6.393 2.515 2.778 H23 7NL 64 7NL H24 H24 H 0 1 N N N 8.905 9.031 -23.297 -7.040 2.472 1.104 H24 7NL 65 7NL H25 H25 H 0 1 N N N -5.429 2.952 -26.796 7.457 2.991 0.533 H25 7NL 66 7NL H26 H26 H 0 1 N N N -1.259 3.071 -27.781 3.561 2.016 1.987 H26 7NL 67 7NL H27 H27 H 0 1 N N N -1.280 3.010 -23.025 4.371 -1.138 -1.490 H27 7NL 68 7NL H28 H28 H 0 1 N N N -3.026 2.860 -21.284 6.232 -1.540 -3.010 H28 7NL 69 7NL H29 H29 H 0 1 N N N -5.392 2.876 -22.047 8.252 -0.142 -2.923 H29 7NL 70 7NL H30 H30 H 0 1 N N N -6.020 2.876 -24.310 8.442 1.678 -1.315 H30 7NL 71 7NL H31 H31 H 0 1 N N N 6.667 -0.209 -24.484 -2.497 -5.923 0.214 H31 7NL 72 7NL H34 H34 H 0 1 N N N -4.614 2.958 -28.907 5.986 3.356 3.102 H34 7NL 73 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7NL O34 C34 SING N N 1 7NL C34 C35 DOUB Y N 2 7NL C34 C33 SING Y N 3 7NL C35 C21 SING Y N 4 7NL C33 C32 DOUB Y N 5 7NL N8 C7 DOUB Y N 6 7NL N8 C9 SING Y N 7 7NL C21 C9 SING N N 8 7NL C21 C31 DOUB Y N 9 7NL C7 C1 SING Y N 10 7NL C9 C10 DOUB Y N 11 7NL C32 C31 SING Y N 12 7NL C32 C39 SING Y N 13 7NL C1 C6 DOUB Y N 14 7NL C1 C2 SING Y N 15 7NL C10 C2 SING Y N 16 7NL C10 F12 SING N N 17 7NL N15 C14 SING N N 18 7NL N15 C6 SING N N 19 7NL N15 C16 SING N N 20 7NL C14 C13 SING N N 21 7NL C31 C36 SING Y N 22 7NL C6 N5 SING Y N 23 7NL C2 N3 DOUB Y N 24 7NL C16 C17 SING N N 25 7NL C28 N24 SING N N 26 7NL C28 C30 SING N N 27 7NL C39 C38 DOUB Y N 28 7NL N5 C4 DOUB Y N 29 7NL N3 C4 SING Y N 30 7NL N24 C25 SING N N 31 7NL N24 C23 SING N N 32 7NL C4 O11 SING N N 33 7NL C25 C26 SING N N 34 7NL N18 C13 SING N N 35 7NL N18 C17 SING N N 36 7NL C30 C29 SING N N 37 7NL C13 C19 SING N N 38 7NL C36 C37 DOUB Y N 39 7NL O11 C22 SING N N 40 7NL C17 C20 SING N N 41 7NL C22 C23 SING N N 42 7NL C38 C37 SING Y N 43 7NL C23 C29 SING N N 44 7NL C23 C27 SING N N 45 7NL C19 C20 SING N N 46 7NL C26 F262 SING N N 47 7NL C26 C27 SING N N 48 7NL C7 H1 SING N N 49 7NL C13 H2 SING N N 50 7NL C14 H3 SING N N 51 7NL C14 H4 SING N N 52 7NL C16 H5 SING N N 53 7NL C16 H6 SING N N 54 7NL C17 H7 SING N N 55 7NL C19 H8 SING N N 56 7NL C19 H9 SING N N 57 7NL C20 H10 SING N N 58 7NL C20 H11 SING N N 59 7NL C22 H12 SING N N 60 7NL C22 H13 SING N N 61 7NL C25 H14 SING N N 62 7NL C25 H15 SING N N 63 7NL C26 H16 SING N N 64 7NL C27 H17 SING N N 65 7NL C27 H18 SING N N 66 7NL C28 H19 SING N N 67 7NL C28 H20 SING N N 68 7NL C29 H21 SING N N 69 7NL C29 H22 SING N N 70 7NL C30 H23 SING N N 71 7NL C30 H24 SING N N 72 7NL C33 H25 SING N N 73 7NL C35 H26 SING N N 74 7NL C36 H27 SING N N 75 7NL C37 H28 SING N N 76 7NL C38 H29 SING N N 77 7NL C39 H30 SING N N 78 7NL N18 H31 SING N N 79 7NL O34 H34 SING N N 80 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7NL SMILES ACDLabs 12.01 "FC1CC2(CCCN2C1)COc1nc2c(F)c(ncc2c(n1)N1CC2CCC(N2)C1)c1cc(O)cc2ccccc21" 7NL InChI InChI 1.03 "InChI=1S/C31H32F2N6O2/c32-19-12-31(8-3-9-39(31)14-19)17-41-30-36-28-25(29(37-30)38-15-20-6-7-21(16-38)35-20)13-34-27(26(28)33)24-11-22(40)10-18-4-1-2-5-23(18)24/h1-2,4-5,10-11,13,19-21,35,40H,3,6-9,12,14-17H2/t19-,20-,21+,31+/m1/s1" 7NL InChIKey InChI 1.03 LRWPFUDCDOHRDC-NSLMUOPJSA-N 7NL SMILES_CANONICAL CACTVS 3.385 "Oc1cc2ccccc2c(c1)c3ncc4c(nc(OC[C@@]56CCCN5C[C@H](F)C6)nc4c3F)N7C[C@H]8CC[C@@H](C7)N8" 7NL SMILES CACTVS 3.385 "Oc1cc2ccccc2c(c1)c3ncc4c(nc(OC[C]56CCCN5C[CH](F)C6)nc4c3F)N7C[CH]8CC[CH](C7)N8" 7NL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cc(cc2c3c(c4c(cn3)c(nc(n4)OC[C@@]56CCCN5C[C@@H](C6)F)N7C[C@H]8CC[C@@H](C7)N8)F)O" 7NL SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cc(cc2c3c(c4c(cn3)c(nc(n4)OCC56CCCN5CC(C6)F)N7CC8CCC(C7)N8)F)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7NL "SYSTEMATIC NAME" ACDLabs 12.01 "4-(4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-8-fluoro-2-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-7-yl)naphthalen-2-ol" 7NL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[4-[(1~{R},5~{S})-3,8-diazabicyclo[3.2.1]octan-3-yl]-8-fluoranyl-2-[[(2~{R},8~{S})-2-fluoranyl-1,2,3,5,6,7-hexahydropyrrolizin-8-yl]methoxy]pyrido[4,3-d]pyrimidin-7-yl]naphthalen-2-ol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7NL "Create component" 2021-08-13 RCSB 7NL "Initial release" 2021-12-22 RCSB ##