data_7NU # _chem_comp.id 7NU _chem_comp.name "phenyl 6,7-anhydro-D-glycero-beta-D-galacto-heptopyranoside" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C13 H16 O6" _chem_comp.mon_nstd_parent_comp_id BGC _chem_comp.pdbx_synonyms ;Phenyl 6,7-dideoxy-6,7-epoxy-beta-D-galacto-heptopyranoside(6D); phenyl 6,7-anhydro-D-glycero-beta-D-galacto-heptoside; phenyl 6,7-anhydro-D-glycero-D-galacto-heptoside; phenyl 6,7-anhydro-D-glycero-galacto-heptoside ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-11-28 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 268.263 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7NU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5MIH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 7NU "Phenyl 6,7-dideoxy-6,7-epoxy-beta-D-galacto-heptopyranoside(6D)" PDB ? 2 7NU "phenyl 6,7-anhydro-D-glycero-beta-D-galacto-heptoside" PDB ? 3 7NU "phenyl 6,7-anhydro-D-glycero-D-galacto-heptoside" PDB ? 4 7NU "phenyl 6,7-anhydro-D-glycero-galacto-heptoside" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7NU O2 O2 O 0 1 N N N 18.194 -33.248 13.439 -0.933 3.069 0.581 O2 7NU 1 7NU C2 C2 C 0 1 N N R 17.125 -32.528 14.008 -1.201 1.798 -0.013 C2 7NU 2 7NU C3 C3 C 0 1 N N S 16.874 -32.939 15.474 -2.462 1.195 0.614 C3 7NU 3 7NU O3 O3 O 0 1 N N N 17.962 -32.596 16.261 -3.585 2.030 0.324 O3 7NU 4 7NU C1 C1 C 0 1 N N S 15.916 -32.821 13.196 -0.018 0.858 0.235 C1 7NU 5 7NU O5 O5 O 0 1 N N N 14.814 -32.128 13.689 -0.312 -0.430 -0.309 O5 7NU 6 7NU C5 C5 C 0 1 N N S 14.460 -32.608 14.948 -1.454 -1.063 0.273 C5 7NU 7 7NU C6 C6 C 0 1 N N R 13.121 -31.951 15.409 -1.655 -2.439 -0.364 C6 7NU 8 7NU O6 O6 O 0 1 N N N 12.162 -31.559 14.479 -1.773 -3.565 0.507 O6 7NU 9 7NU C7 C7 C 0 1 N N N 12.894 -30.557 15.146 -0.535 -3.469 -0.204 C7 7NU 10 7NU C4 C4 C 0 1 N N R 15.525 -32.325 15.949 -2.695 -0.200 0.026 C4 7NU 11 7NU O4 O4 O 0 1 N N N 15.836 -30.945 16.177 -2.930 -0.093 -1.380 O4 7NU 12 7NU O1 O1 O 0 1 N N N 16.137 -32.471 11.828 1.151 1.386 -0.395 O1 7NU 13 7NU C8 C8 C 0 1 Y N N 15.545 -32.996 10.796 2.318 0.723 -0.184 C8 7NU 14 7NU C9 C9 C 0 1 Y N N 14.580 -34.043 10.885 3.492 1.180 -0.765 C9 7NU 15 7NU C10 C10 C 0 1 Y N N 13.937 -34.493 9.715 4.677 0.504 -0.549 C10 7NU 16 7NU C11 C11 C 0 1 Y N N 14.235 -33.936 8.466 4.695 -0.627 0.245 C11 7NU 17 7NU C12 C12 C 0 1 Y N N 15.181 -32.908 8.381 3.526 -1.085 0.826 C12 7NU 18 7NU C13 C13 C 0 1 Y N N 15.806 -32.464 9.564 2.339 -0.409 0.618 C13 7NU 19 7NU HO2 H1 H 0 1 N Y N 18.987 -33.083 13.935 -0.146 3.509 0.231 HO2 7NU 20 7NU H2 H2 H 0 1 N N N 17.331 -31.448 13.977 -1.350 1.921 -1.086 H2 7NU 21 7NU H3 H3 H 0 1 N N N 16.751 -34.032 15.487 -2.332 1.119 1.693 H3 7NU 22 7NU HO3 H4 H 0 1 N Y N 17.797 -32.853 17.160 -3.503 2.932 0.662 HO3 7NU 23 7NU H1 H5 H 0 1 N N N 15.721 -33.902 13.256 0.156 0.768 1.308 H1 7NU 24 7NU H5 H6 H 0 1 N N N 14.301 -33.696 14.903 -1.299 -1.178 1.345 H5 7NU 25 7NU H61 H7 H 0 1 N N N 12.753 -32.325 16.376 -2.228 -2.452 -1.291 H61 7NU 26 7NU H8 H8 H 0 1 N N N 13.646 -29.966 14.603 -0.365 -4.167 -1.024 H8 7NU 27 7NU H9 H9 H 0 1 N N N 12.405 -29.923 15.901 0.351 -3.173 0.357 H9 7NU 28 7NU H4 H10 H 0 1 N N N 15.252 -32.803 16.901 -3.559 -0.658 0.507 H4 7NU 29 7NU HO4 H11 H 0 1 N Y N 16.524 -30.878 16.829 -3.700 0.446 -1.610 HO4 7NU 30 7NU H12 H12 H 0 1 N N N 14.344 -34.487 11.841 3.479 2.063 -1.387 H12 7NU 31 7NU H13 H13 H 0 1 N N N 13.202 -35.281 9.783 5.591 0.860 -1.002 H13 7NU 32 7NU H14 H14 H 0 1 N N N 13.740 -34.296 7.576 5.622 -1.154 0.413 H14 7NU 33 7NU H15 H15 H 0 1 N N N 15.427 -32.464 7.428 3.542 -1.969 1.445 H15 7NU 34 7NU H16 H16 H 0 1 N N N 16.527 -31.663 9.494 1.427 -0.767 1.071 H16 7NU 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7NU C12 C11 DOUB Y N 1 7NU C12 C13 SING Y N 2 7NU C11 C10 SING Y N 3 7NU C13 C8 DOUB Y N 4 7NU C10 C9 DOUB Y N 5 7NU C8 C9 SING Y N 6 7NU C8 O1 SING N N 7 7NU O1 C1 SING N N 8 7NU C1 O5 SING N N 9 7NU C1 C2 SING N N 10 7NU O2 C2 SING N N 11 7NU O5 C5 SING N N 12 7NU C2 C3 SING N N 13 7NU O6 C7 SING N N 14 7NU O6 C6 SING N N 15 7NU C5 C6 SING N N 16 7NU C5 C4 SING N N 17 7NU C7 C6 SING N N 18 7NU C3 C4 SING N N 19 7NU C3 O3 SING N N 20 7NU C4 O4 SING N N 21 7NU O2 HO2 SING N N 22 7NU C2 H2 SING N N 23 7NU C3 H3 SING N N 24 7NU O3 HO3 SING N N 25 7NU C1 H1 SING N N 26 7NU C5 H5 SING N N 27 7NU C6 H61 SING N N 28 7NU C7 H8 SING N N 29 7NU C7 H9 SING N N 30 7NU C4 H4 SING N N 31 7NU O4 HO4 SING N N 32 7NU C9 H12 SING N N 33 7NU C10 H13 SING N N 34 7NU C11 H14 SING N N 35 7NU C12 H15 SING N N 36 7NU C13 H16 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7NU InChI InChI 1.03 "InChI=1S/C13H16O6/c14-9-10(15)12(8-6-17-8)19-13(11(9)16)18-7-4-2-1-3-5-7/h1-5,8-16H,6H2/t8-,9+,10-,11-,12-,13-/m1/s1" 7NU InChIKey InChI 1.03 BGULDTQQEDQGRU-LREJFELKSA-N 7NU SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1[C@@H](O)[C@@H](O[C@H]([C@H]2CO2)[C@@H]1O)Oc3ccccc3" 7NU SMILES CACTVS 3.385 "O[CH]1[CH](O)[CH](O[CH]([CH]2CO2)[CH]1O)Oc3ccccc3" 7NU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)O[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)[C@H]3CO3)O)O)O" 7NU SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)OC2C(C(C(C(O2)C3CO3)O)O)O" # _pdbx_chem_comp_identifier.comp_id 7NU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{R},4~{S},5~{R},6~{S})-2-[(2~{R})-oxiran-2-yl]-6-phenoxy-oxane-3,4,5-triol" # _pdbx_chem_comp_related.comp_id 7NU _pdbx_chem_comp_related.related_comp_id BGC _pdbx_chem_comp_related.relationship_type "Carbohydrate core" _pdbx_chem_comp_related.details ? # # loop_ _pdbx_chem_comp_atom_related.ordinal _pdbx_chem_comp_atom_related.comp_id _pdbx_chem_comp_atom_related.atom_id _pdbx_chem_comp_atom_related.related_comp_id _pdbx_chem_comp_atom_related.related_atom_id _pdbx_chem_comp_atom_related.related_type 1 7NU C1 BGC C1 "Carbohydrate core" 2 7NU C2 BGC C2 "Carbohydrate core" 3 7NU C3 BGC C3 "Carbohydrate core" 4 7NU C4 BGC C4 "Carbohydrate core" 5 7NU C5 BGC C5 "Carbohydrate core" 6 7NU C6 BGC C6 "Carbohydrate core" 7 7NU O1 BGC O1 "Carbohydrate core" 8 7NU O2 BGC O2 "Carbohydrate core" 9 7NU O3 BGC O3 "Carbohydrate core" 10 7NU O4 BGC O4 "Carbohydrate core" 11 7NU O5 BGC O5 "Carbohydrate core" 12 7NU O6 BGC O6 "Carbohydrate core" 13 7NU HO2 BGC HO2 "Carbohydrate core" 14 7NU H4 BGC H4 "Carbohydrate core" 15 7NU HO4 BGC HO4 "Carbohydrate core" 16 7NU H2 BGC H2 "Carbohydrate core" 17 7NU H3 BGC H3 "Carbohydrate core" 18 7NU HO3 BGC HO3 "Carbohydrate core" 19 7NU H1 BGC H1 "Carbohydrate core" 20 7NU H5 BGC H5 "Carbohydrate core" 21 7NU H61 BGC H61 "Carbohydrate core" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support 7NU "CARBOHYDRATE ISOMER" D PDB ? 7NU "CARBOHYDRATE RING" pyranose PDB ? 7NU "CARBOHYDRATE ANOMER" beta PDB ? 7NU "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7NU "Create component" 2016-11-28 EBI 7NU "Initial release" 2017-10-11 RCSB 7NU "Other modification" 2020-07-03 RCSB 7NU "Modify parent residue" 2020-07-17 RCSB 7NU "Modify name" 2020-07-17 RCSB 7NU "Modify synonyms" 2020-07-17 RCSB 7NU "Modify internal type" 2020-07-17 RCSB 7NU "Modify linking type" 2020-07-17 RCSB 7NU "Modify atom id" 2020-07-17 RCSB 7NU "Modify component atom id" 2020-07-17 RCSB 7NU "Modify leaving atom flag" 2020-07-17 RCSB ##