data_7OT
#
_chem_comp.id 7OT
_chem_comp.name SPHEROIDENE
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C41 H60 O"
_chem_comp.mon_nstd_parent_comp_id SPO
_chem_comp.pdbx_synonyms "(6E,10E,12E,14E,16E,18E,20E,22E,24E,26E,28E)-31-methoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-2,6,10,12,14,16,18,20,22,24,26,28-dodecaene"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2021-08-13
_chem_comp.pdbx_modified_date 2021-11-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 568.914
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 7OT
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7PBW
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
7OT CM1 C1 C 0 1 N N N 120.119 145.043 115.566 16.768 2.671 -1.058 CM1 7OT 1
7OT O1 O1 O 0 1 N N N 120.113 144.315 116.789 16.016 1.863 -0.151 O1 7OT 2
7OT C1 C2 C 0 1 N N N 121.397 144.048 117.408 15.783 0.531 -0.613 C1 7OT 3
7OT C2 C3 C 0 1 N N N 122.042 142.909 116.644 15.004 0.578 -1.930 C2 7OT 4
7OT C3 C4 C 0 1 N N N 122.281 145.280 117.405 17.123 -0.172 -0.839 C3 7OT 5
7OT C4 C5 C 0 1 N N N 121.148 143.572 118.837 14.972 -0.237 0.432 C4 7OT 6
7OT C5 C6 C 0 1 N N N 120.566 144.624 119.732 13.606 0.384 0.564 C5 7OT 7
7OT C6 C7 C 0 1 N N N 121.183 145.126 120.785 12.512 -0.368 0.406 C6 7OT 8
7OT C7 C8 C 0 1 N N N 120.662 146.116 121.710 11.226 0.216 0.530 C7 7OT 9
7OT C8 C9 C 0 1 N N N 119.187 146.396 121.687 11.092 1.684 0.841 C8 7OT 10
7OT C9 C10 C 0 1 N N N 121.497 146.644 122.636 10.114 -0.549 0.369 C9 7OT 11
7OT C10 C11 C 0 1 N N N 121.179 147.553 123.694 8.839 0.030 0.492 C10 7OT 12
7OT C11 C12 C 0 1 N N N 122.108 147.954 124.558 7.722 -0.737 0.331 C11 7OT 13
7OT C12 C13 C 0 1 N N N 121.945 148.788 125.733 6.451 -0.160 0.454 C12 7OT 14
7OT C13 C14 C 0 1 N N N 120.550 149.160 126.151 6.317 1.309 0.764 C13 7OT 15
7OT C14 C15 C 0 1 N N N 123.045 149.103 126.457 5.324 -0.934 0.290 C14 7OT 16
7OT C15 C16 C 0 1 N N N 123.113 149.805 127.701 4.055 -0.358 0.413 C15 7OT 17
7OT C16 C17 C 0 1 N N N 124.271 150.138 128.281 2.927 -1.133 0.250 C16 7OT 18
7OT C17 C18 C 0 1 N N N 124.452 150.742 129.585 1.658 -0.556 0.372 C17 7OT 19
7OT C18 C19 C 0 1 N N N 123.268 151.405 130.229 1.524 0.912 0.683 C18 7OT 20
7OT C19 C20 C 0 1 N N N 125.665 150.656 130.179 0.530 -1.331 0.209 C19 7OT 21
7OT C20 C21 C 0 1 N N N 126.030 151.077 131.495 -0.740 -0.754 0.332 C20 7OT 22
7OT C21 C22 C 0 1 N N N 127.269 150.920 131.996 -1.866 -1.529 0.169 C21 7OT 23
7OT C22 C23 C 0 1 N N N 127.621 151.221 133.344 -3.138 -0.951 0.292 C22 7OT 24
7OT C23 C24 C 0 1 N N N 128.804 151.002 133.953 -4.255 -1.719 0.130 C23 7OT 25
7OT C24 C25 C 0 1 N N N 130.005 150.463 133.228 -4.121 -3.188 -0.181 C24 7OT 26
7OT C25 C26 C 0 1 N N N 128.931 151.271 135.373 -5.530 -1.140 0.253 C25 7OT 27
7OT C26 C27 C 0 1 N N N 129.988 151.006 136.151 -6.642 -1.904 0.092 C26 7OT 28
7OT C27 C28 C 0 1 N N N 130.011 151.235 137.563 -7.927 -1.320 0.216 C27 7OT 29
7OT C28 C29 C 0 1 N N N 131.018 151.007 138.420 -9.021 -2.072 0.058 C28 7OT 30
7OT C29 C30 C 0 1 N N N 132.358 150.480 137.990 -8.887 -3.541 -0.253 C29 7OT 31
7OT C30 C31 C 0 1 N N N 130.867 151.254 139.901 -10.388 -1.451 0.190 C30 7OT 32
7OT C31 C32 C 0 1 N N N 130.965 149.930 140.682 -10.904 -1.055 -1.195 C31 7OT 33
7OT C32 C33 C 0 1 N N N 130.598 150.060 142.134 -12.271 -0.434 -1.062 C32 7OT 34
7OT C33 C34 C 0 1 N N N 129.404 149.867 142.681 -12.472 0.797 -1.461 C33 7OT 35
7OT C34 C35 C 0 1 N N N 128.188 149.470 141.894 -11.311 1.639 -1.923 C34 7OT 36
7OT C35 C36 C 0 1 N N N 129.181 150.023 144.166 -13.865 1.372 -1.457 C35 7OT 37
7OT C36 C37 C 0 1 N N N 130.403 150.442 145.000 -14.095 2.143 -0.155 C36 7OT 38
7OT C37 C38 C 0 1 N N N 130.071 150.406 146.463 -15.488 2.718 -0.151 C37 7OT 39
7OT C38 C39 C 0 1 N N N 129.870 151.418 147.290 -16.286 2.495 0.864 C38 7OT 40
7OT C39 C40 C 0 1 N N N 129.958 152.850 146.857 -17.738 2.890 0.782 C39 7OT 41
7OT C40 C41 C 0 1 N N N 129.537 151.223 148.738 -15.751 1.845 2.114 C40 7OT 42
7OT HM11 H1 H 0 0 N N N 119.086 145.173 115.211 16.234 2.748 -2.005 H1 7OT 43
7OT HM12 H2 H 0 0 N N N 120.577 146.030 115.729 16.902 3.666 -0.634 H2 7OT 44
7OT HM13 H3 H 0 0 N N N 120.699 144.489 114.813 17.744 2.214 -1.228 H3 7OT 45
7OT H21A H4 H 0 0 N N N 123.022 142.678 117.087 15.581 1.125 -2.674 H4 7OT 46
7OT H22A H5 H 0 0 N N N 121.397 142.020 116.698 14.826 -0.438 -2.283 H5 7OT 47
7OT H14 H6 H 0 1 N N N 122.175 143.202 115.592 14.049 1.079 -1.769 H6 7OT 48
7OT H21 H7 H 0 1 N N N 121.787 146.087 117.966 17.678 -0.205 0.099 H7 7OT 49
7OT H32A H8 H 0 0 N N N 123.245 145.041 117.879 16.945 -1.188 -1.191 H8 7OT 50
7OT H241 H9 H 0 0 N N N 122.453 145.605 116.368 17.700 0.376 -1.583 H9 7OT 51
7OT H293 H10 H 0 0 N N N 120.451 142.721 118.803 14.871 -1.277 0.120 H10 7OT 52
7OT H301 H11 H 0 0 N N N 122.107 143.244 119.265 15.485 -0.195 1.393 H11 7OT 53
7OT H5 H12 H 0 1 N N N 119.579 144.995 119.500 13.510 1.436 0.787 H12 7OT 54
7OT H6 H13 H 0 1 N N N 122.181 144.762 120.979 12.608 -1.421 0.183 H13 7OT 55
7OT H81 H14 H 0 1 N N N 118.947 147.163 122.438 11.060 2.251 -0.089 H14 7OT 56
7OT H82 H15 H 0 1 N N N 118.898 146.758 120.689 10.174 1.855 1.403 H15 7OT 57
7OT H83 H16 H 0 1 N N N 118.635 145.473 121.916 11.947 2.009 1.435 H16 7OT 58
7OT H9 H17 H 0 1 N N N 122.531 146.341 122.567 10.210 -1.601 0.146 H17 7OT 59
7OT H10 H18 H 0 1 N N N 120.168 147.920 123.793 8.743 1.083 0.715 H18 7OT 60
7OT H11 H19 H 0 1 N N N 123.114 147.614 124.358 7.818 -1.790 0.108 H19 7OT 61
7OT H131 H20 H 0 0 N N N 120.592 149.790 127.052 6.284 1.875 -0.166 H20 7OT 62
7OT H132 H21 H 0 0 N N N 120.060 149.715 125.338 5.399 1.479 1.326 H21 7OT 63
7OT H133 H22 H 0 0 N N N 119.977 148.247 126.369 7.172 1.634 1.358 H22 7OT 64
7OT H1 H23 H 0 1 N N N 123.990 148.784 126.043 5.420 -1.987 0.067 H23 7OT 65
7OT H15 H24 H 0 1 N N N 122.191 150.078 128.193 3.959 0.695 0.636 H24 7OT 66
7OT H16 H25 H 0 1 N N N 125.169 149.935 127.716 3.023 -2.185 0.027 H25 7OT 67
7OT H181 H26 H 0 0 N N N 123.563 151.813 131.207 1.491 1.479 -0.247 H26 7OT 68
7OT H182 H27 H 0 0 N N N 122.910 152.221 129.585 0.605 1.083 1.245 H27 7OT 69
7OT H183 H28 H 0 0 N N N 122.464 150.667 130.367 2.378 1.237 1.277 H28 7OT 70
7OT H19 H29 H 0 1 N N N 126.453 150.216 129.586 0.626 -2.384 -0.014 H29 7OT 71
7OT H20 H30 H 0 1 N N N 125.278 151.542 132.115 -0.836 0.298 0.555 H30 7OT 72
7OT H2 H31 H 0 1 N N N 128.040 150.545 131.340 -1.771 -2.581 -0.054 H31 7OT 73
7OT H22 H32 H 0 1 N N N 126.851 151.678 133.948 -3.234 0.101 0.514 H32 7OT 74
7OT H3 H33 H 0 1 N N N 130.847 150.371 133.930 -4.088 -3.754 0.749 H33 7OT 75
7OT H242 H34 H 0 0 N N N 129.767 149.474 132.809 -4.976 -3.513 -0.775 H34 7OT 76
7OT H243 H35 H 0 0 N N N 130.280 151.150 132.414 -3.203 -3.358 -0.743 H35 7OT 77
7OT H25 H36 H 0 1 N N N 128.082 151.734 135.854 -5.625 -0.088 0.476 H36 7OT 78
7OT H26 H37 H 0 1 N N N 130.873 150.596 135.687 -6.546 -2.957 -0.131 H37 7OT 79
7OT H27 H38 H 0 1 N N N 129.107 151.641 137.992 -8.023 -0.268 0.439 H38 7OT 80
7OT H291 H39 H 0 0 N N N 133.012 150.378 138.869 -8.854 -4.108 0.677 H39 7OT 81
7OT H292 H40 H 0 0 N N N 132.229 149.497 137.513 -9.742 -3.866 -0.847 H40 7OT 82
7OT H4 H41 H 0 1 N N N 132.814 151.179 137.273 -7.969 -3.711 -0.815 H41 7OT 83
7OT H7 H42 H 0 1 N N N 131.664 151.933 140.238 -11.072 -2.171 0.641 H42 7OT 84
7OT H302 H43 H 0 0 N N N 129.887 151.716 140.093 -10.325 -0.565 0.822 H43 7OT 85
7OT H311 H44 H 0 0 N N N 130.287 149.200 140.216 -10.220 -0.336 -1.645 H44 7OT 86
7OT H312 H45 H 0 0 N N N 132.000 149.563 140.616 -10.967 -1.941 -1.826 H45 7OT 87
7OT H32 H46 H 0 1 N N N 131.394 150.342 142.807 -13.085 -1.005 -0.639 H46 7OT 88
7OT H341 H47 H 0 0 N N N 127.327 149.373 142.572 -11.111 1.437 -2.975 H47 7OT 89
7OT H342 H48 H 0 0 N N N 127.974 150.239 141.137 -11.553 2.694 -1.795 H48 7OT 90
7OT H343 H49 H 0 0 N N N 128.372 148.507 141.396 -10.428 1.396 -1.332 H49 7OT 91
7OT H351 H50 H 0 0 N N N 128.401 150.785 144.309 -13.982 2.048 -2.304 H50 7OT 92
7OT H352 H51 H 0 0 N N N 128.826 149.057 144.554 -14.592 0.564 -1.534 H51 7OT 93
7OT H361 H52 H 0 0 N N N 131.234 149.750 144.799 -13.979 1.467 0.693 H52 7OT 94
7OT H362 H53 H 0 0 N N N 130.701 151.463 144.720 -13.368 2.951 -0.078 H53 7OT 95
7OT H37 H54 H 0 1 N N N 129.985 149.422 146.899 -15.829 3.313 -0.985 H54 7OT 96
7OT H391 H55 H 0 0 N N N 129.753 153.506 147.715 -18.318 2.059 0.379 H55 7OT 97
7OT H392 H56 H 0 0 N N N 130.968 153.055 146.472 -18.104 3.139 1.778 H56 7OT 98
7OT H393 H57 H 0 0 N N N 129.218 153.040 146.065 -17.843 3.757 0.130 H57 7OT 99
7OT H401 H58 H 0 0 N N N 129.416 152.203 149.222 -14.671 1.727 2.029 H58 7OT 100
7OT H402 H59 H 0 0 N N N 128.600 150.653 148.825 -15.982 2.471 2.976 H59 7OT 101
7OT H403 H60 H 0 0 N N N 130.350 150.670 149.230 -16.215 0.866 2.241 H60 7OT 102
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
7OT CM1 O1 SING N N 1
7OT C2 C1 SING N N 2
7OT O1 C1 SING N N 3
7OT C3 C1 SING N N 4
7OT C1 C4 SING N N 5
7OT C4 C5 SING N N 6
7OT C5 C6 DOUB N E 7
7OT C6 C7 SING N N 8
7OT C8 C7 SING N N 9
7OT C7 C9 DOUB N E 10
7OT C9 C10 SING N N 11
7OT C10 C11 DOUB N E 12
7OT C11 C12 SING N N 13
7OT C12 C13 SING N N 14
7OT C12 C14 DOUB N E 15
7OT C14 C15 SING N N 16
7OT C15 C16 DOUB N E 17
7OT C16 C17 SING N N 18
7OT C17 C19 DOUB N E 19
7OT C17 C18 SING N N 20
7OT C19 C20 SING N N 21
7OT C20 C21 DOUB N E 22
7OT C21 C22 SING N N 23
7OT C24 C23 SING N N 24
7OT C22 C23 DOUB N E 25
7OT C23 C25 SING N N 26
7OT C25 C26 DOUB N E 27
7OT C26 C27 SING N N 28
7OT C27 C28 DOUB N E 29
7OT C29 C28 SING N N 30
7OT C28 C30 SING N N 31
7OT C30 C31 SING N N 32
7OT C31 C32 SING N N 33
7OT C34 C33 SING N N 34
7OT C32 C33 DOUB N E 35
7OT C33 C35 SING N N 36
7OT C35 C36 SING N N 37
7OT C36 C37 SING N N 38
7OT C37 C38 DOUB N N 39
7OT C39 C38 SING N N 40
7OT C38 C40 SING N N 41
7OT CM1 HM11 SING N N 42
7OT CM1 HM12 SING N N 43
7OT CM1 HM13 SING N N 44
7OT C2 H21A SING N N 45
7OT C2 H22A SING N N 46
7OT C2 H14 SING N N 47
7OT C3 H21 SING N N 48
7OT C3 H32A SING N N 49
7OT C3 H241 SING N N 50
7OT C4 H293 SING N N 51
7OT C4 H301 SING N N 52
7OT C5 H5 SING N N 53
7OT C6 H6 SING N N 54
7OT C8 H81 SING N N 55
7OT C8 H82 SING N N 56
7OT C8 H83 SING N N 57
7OT C9 H9 SING N N 58
7OT C10 H10 SING N N 59
7OT C11 H11 SING N N 60
7OT C13 H131 SING N N 61
7OT C13 H132 SING N N 62
7OT C13 H133 SING N N 63
7OT C14 H1 SING N N 64
7OT C15 H15 SING N N 65
7OT C16 H16 SING N N 66
7OT C18 H181 SING N N 67
7OT C18 H182 SING N N 68
7OT C18 H183 SING N N 69
7OT C19 H19 SING N N 70
7OT C20 H20 SING N N 71
7OT C21 H2 SING N N 72
7OT C22 H22 SING N N 73
7OT C24 H3 SING N N 74
7OT C24 H242 SING N N 75
7OT C24 H243 SING N N 76
7OT C25 H25 SING N N 77
7OT C26 H26 SING N N 78
7OT C27 H27 SING N N 79
7OT C29 H291 SING N N 80
7OT C29 H292 SING N N 81
7OT C29 H4 SING N N 82
7OT C30 H7 SING N N 83
7OT C30 H302 SING N N 84
7OT C31 H311 SING N N 85
7OT C31 H312 SING N N 86
7OT C32 H32 SING N N 87
7OT C34 H341 SING N N 88
7OT C34 H342 SING N N 89
7OT C34 H343 SING N N 90
7OT C35 H351 SING N N 91
7OT C35 H352 SING N N 92
7OT C36 H361 SING N N 93
7OT C36 H362 SING N N 94
7OT C37 H37 SING N N 95
7OT C39 H391 SING N N 96
7OT C39 H392 SING N N 97
7OT C39 H393 SING N N 98
7OT C40 H401 SING N N 99
7OT C40 H402 SING N N 100
7OT C40 H403 SING N N 101
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
7OT InChI InChI 1.03 "InChI=1S/C41H60O/c1-34(2)20-14-23-37(5)26-17-29-38(6)27-15-24-35(3)21-12-13-22-36(4)25-16-28-39(7)30-18-31-40(8)32-19-33-41(9,10)42-11/h12-13,15-16,18-22,24-28,30-32H,14,17,23,29,33H2,1-11H3/b13-12+,24-15+,25-16+,30-18+,32-19+,35-21+,36-22+,37-26+,38-27+,39-28+,40-31+"
7OT InChIKey InChI 1.03 FJOCMTHZSURUFA-AXYGSFPTSA-N
7OT SMILES_CANONICAL CACTVS 3.385 "COC(C)(C)C\C=C\C(C)=C\C=C\C(C)=C\C=C\C(C)=C\C=C\C=C(C)\C=C\C=C(/C)CC\C=C(/C)CCC=C(C)C"
7OT SMILES CACTVS 3.385 "COC(C)(C)CC=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)CCC=C(C)CCC=C(C)C"
7OT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=CCC/C(=C/CC/C(=C/C=C/C(=C/C=C/C=C(\C)/C=C/C=C(\C)/C=C/C=C(\C)/C=C/CC(C)(C)OC)/C)/C)/C)C"
7OT SMILES "OpenEye OEToolkits" 2.0.7 "CC(=CCCC(=CCCC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC=C(C)C=CCC(C)(C)OC)C)C)C)C"
#
_pdbx_chem_comp_identifier.comp_id 7OT
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier "(6~{E},10~{E},12~{E},14~{E},16~{E},18~{E},20~{E},22~{E},24~{E},26~{E},28~{E})-31-methoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-2,6,10,12,14,16,18,20,22,24,26,28-dodecaene"
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 7OT
_pdbx_chem_comp_synonyms.name "(6E,10E,12E,14E,16E,18E,20E,22E,24E,26E,28E)-31-methoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-2,6,10,12,14,16,18,20,22,24,26,28-dodecaene"
_pdbx_chem_comp_synonyms.provenance PDB
_pdbx_chem_comp_synonyms.type ?
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
7OT "Create component" 2021-08-13 PDBE
7OT "Initial release" 2021-11-24 RCSB
##