data_7PD # _chem_comp.id 7PD _chem_comp.name "2-aminopteridine-4,7(3H,8H)-dione" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H5 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms isoxanthopterin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-11-28 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 179.136 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7PD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5U0X _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7PD C1 C1 C 0 1 N N N -22.318 -6.608 -10.075 2.369 0.984 0.000 C1 7PD 1 7PD C2 C2 C 0 1 N N N -22.423 -4.336 -10.178 0.087 0.732 -0.003 C2 7PD 2 7PD C3 C3 C 0 1 N N N -22.927 -4.297 -11.429 0.213 -0.671 0.001 C3 7PD 3 7PD C4 C4 C 0 1 N N N -22.865 -6.701 -11.469 2.541 -0.421 -0.001 C4 7PD 4 7PD C5 C5 C 0 1 N N N -22.195 -3.028 -9.507 -1.264 1.304 -0.002 C5 7PD 5 7PD C6 C6 C 0 1 N N N -23.053 -2.020 -11.576 -2.091 -0.900 0.005 C6 7PD 6 7PD N7 N1 N 0 1 N N N -22.113 -5.475 -9.472 1.171 1.510 0.002 N7 7PD 7 7PD N8 N2 N 0 1 N N N -23.254 -3.168 -12.150 -0.885 -1.428 0.005 N8 7PD 8 7PD N9 N3 N 0 1 N N N -23.144 -5.488 -12.065 1.462 -1.232 -0.000 N9 7PD 9 7PD N10 N4 N 0 1 N N N -22.533 -1.938 -10.281 -2.308 0.443 -0.007 N10 7PD 10 7PD N11 N5 N 0 1 N N N -23.331 -0.822 -12.195 -3.171 -1.738 -0.001 N11 7PD 11 7PD O12 O1 O 0 1 N N N -23.023 -7.819 -11.941 3.663 -0.897 -0.002 O12 7PD 12 7PD O13 O2 O 0 1 N N N -21.741 -2.953 -8.369 -1.440 2.509 0.004 O13 7PD 13 7PD H1 H1 H 0 1 N N N -22.084 -7.522 -9.550 3.235 1.629 0.005 H1 7PD 14 7PD H2 H2 H 0 1 N N N -23.517 -5.480 -12.993 1.570 -2.196 -0.001 H2 7PD 15 7PD H3 H3 H 0 1 N N N -22.397 -1.028 -9.890 -3.216 0.785 -0.007 H3 7PD 16 7PD H4 H4 H 0 1 N N N -23.703 -0.813 -13.123 -4.069 -1.371 -0.015 H4 7PD 17 7PD H5 H5 H 0 1 N N N -23.161 0.039 -11.716 -3.040 -2.699 0.007 H5 7PD 18 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7PD N11 C6 SING N N 1 7PD N8 C6 DOUB N N 2 7PD N8 C3 SING N N 3 7PD N9 C4 SING N N 4 7PD N9 C3 SING N N 5 7PD O12 C4 DOUB N N 6 7PD C6 N10 SING N N 7 7PD C4 C1 SING N N 8 7PD C3 C2 DOUB N N 9 7PD N10 C5 SING N N 10 7PD C2 C5 SING N N 11 7PD C2 N7 SING N N 12 7PD C1 N7 DOUB N N 13 7PD C5 O13 DOUB N N 14 7PD C1 H1 SING N N 15 7PD N9 H2 SING N N 16 7PD N10 H3 SING N N 17 7PD N11 H4 SING N N 18 7PD N11 H5 SING N N 19 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7PD SMILES ACDLabs 12.01 "C2=NC=1C(=O)NC(=NC=1NC2=O)N" 7PD InChI InChI 1.03 "InChI=1S/C6H5N5O2/c7-6-10-4-3(5(13)11-6)8-1-2(12)9-4/h1H,(H4,7,9,10,11,12,13)" 7PD InChIKey InChI 1.03 GLKCOBIIZKYKFN-UHFFFAOYSA-N 7PD SMILES_CANONICAL CACTVS 3.385 "NC1=NC2=C(N=CC(=O)N2)C(=O)N1" 7PD SMILES CACTVS 3.385 "NC1=NC2=C(N=CC(=O)N2)C(=O)N1" 7PD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1=NC2=C(NC1=O)N=C(NC2=O)N" 7PD SMILES "OpenEye OEToolkits" 2.0.6 "C1=NC2=C(NC1=O)N=C(NC2=O)N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7PD "SYSTEMATIC NAME" ACDLabs 12.01 "2-aminopteridine-4,7(3H,8H)-dione" 7PD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-azanyl-3,8-dihydropteridine-4,7-dione" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7PD "Create component" 2016-11-28 RCSB 7PD "Initial release" 2020-12-16 RCSB 7PD "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 7PD _pdbx_chem_comp_synonyms.name isoxanthopterin _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##