data_7PH # _chem_comp.id 7PH _chem_comp.name "(1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H57 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "PHOSPHATIDIC ACID" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-04-28 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 564.732 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7PH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3CX5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7PH P P P 0 1 N N N -2.226 -22.545 39.244 1.803 3.582 1.993 P 7PH 1 7PH O12 O12 O 0 1 N N N -2.933 -21.906 40.485 2.767 4.839 1.701 O12 7PH 2 7PH O13 O13 O 0 1 N N N -1.303 -23.705 39.669 2.611 2.470 2.831 O13 7PH 3 7PH O14 O14 O 0 1 N N N -3.398 -23.059 38.392 0.629 4.032 2.773 O14 7PH 4 7PH O11 O11 O 0 1 N N N -1.577 -21.540 38.241 1.309 2.949 0.597 O11 7PH 5 7PH C1 C1 C 0 1 N N N -0.850 -21.786 37.016 0.476 3.654 -0.325 C1 7PH 6 7PH C2 C2 C 0 1 N N R 0.071 -20.727 36.545 0.197 2.767 -1.541 C2 7PH 7 7PH C3 C3 C 0 1 N N N -0.797 -19.469 36.427 1.523 2.302 -2.148 C3 7PH 8 7PH O31 O31 O 0 1 N N N 0.116 -18.537 36.013 2.321 1.650 -1.125 O31 7PH 9 7PH O32 O32 O 0 1 N N N -1.367 -16.812 36.029 3.895 1.311 -2.639 O32 7PH 10 7PH C31 C31 C 0 1 N N N -0.284 -17.285 35.856 3.522 1.181 -1.497 C31 7PH 11 7PH C32 C32 C 0 1 N N N 0.960 -16.531 35.419 4.407 0.491 -0.491 C32 7PH 12 7PH C33 C33 C 0 1 N N N 0.821 -15.022 35.182 5.708 0.057 -1.168 C33 7PH 13 7PH C34 C34 C 0 1 N N N 2.073 -14.335 35.739 6.606 -0.643 -0.146 C34 7PH 14 7PH C35 C35 C 0 1 N N N 1.711 -13.362 36.822 7.907 -1.077 -0.823 C35 7PH 15 7PH C36 C36 C 0 1 N N N 2.937 -13.091 37.602 8.806 -1.777 0.199 C36 7PH 16 7PH C37 C37 C 0 1 N N N 2.887 -11.700 38.234 10.107 -2.211 -0.479 C37 7PH 17 7PH C38 C38 C 0 1 N N N 4.384 -11.707 38.787 11.005 -2.911 0.544 C38 7PH 18 7PH C39 C39 C 0 1 N N N 4.833 -12.732 39.829 12.306 -3.345 -0.134 C39 7PH 19 7PH C3A C3A C 0 1 N N N 5.414 -12.009 41.074 13.204 -4.045 0.888 C3A 7PH 20 7PH C3B C3B C 0 1 N N N 5.268 -12.869 42.358 14.506 -4.479 0.211 C3B 7PH 21 7PH C3C C3C C 0 1 N N N 5.432 -12.012 43.636 15.404 -5.179 1.233 C3C 7PH 22 7PH O21 O21 O 0 1 N N N 1.019 -20.439 37.589 -0.578 1.610 -1.128 O21 7PH 23 7PH O22 O22 O 0 1 N N N 2.530 -21.895 36.842 -2.420 2.764 -1.527 O22 7PH 24 7PH C21 C21 C 0 1 N N N 2.265 -20.930 37.431 -1.915 1.728 -1.164 C21 7PH 25 7PH C22 C22 C 0 1 N N N 3.305 -20.088 38.119 -2.785 0.569 -0.750 C22 7PH 26 7PH C23 C23 C 0 1 N N N 4.687 -19.959 37.433 -4.257 0.964 -0.882 C23 7PH 27 7PH C24 C24 C 0 1 N N N 4.538 -19.584 35.957 -5.140 -0.213 -0.463 C24 7PH 28 7PH C25 C25 C 0 1 N N N 5.424 -18.420 35.461 -6.612 0.182 -0.595 C25 7PH 29 7PH C26 C26 C 0 1 N N N 5.380 -18.361 33.888 -7.496 -0.994 -0.175 C26 7PH 30 7PH C27 C27 C 0 1 N N N 5.911 -17.012 33.351 -8.968 -0.600 -0.308 C27 7PH 31 7PH C28 C28 C 0 1 N N N 7.386 -16.686 33.782 -9.851 -1.776 0.112 C28 7PH 32 7PH C29 C29 C 0 1 N N N 7.435 -15.742 35.054 -11.323 -1.382 -0.020 C29 7PH 33 7PH C2A C2A C 0 1 N N N 8.083 -16.416 36.316 -12.207 -2.558 0.400 C2A 7PH 34 7PH C2B C2B C 0 1 N N N 7.887 -15.510 37.550 -13.679 -2.163 0.267 C2B 7PH 35 7PH C2C C2C C 0 1 N N N 8.842 -15.929 38.663 -14.562 -3.340 0.687 C2C 7PH 36 7PH C2D C2D C 0 1 N N N 9.323 -14.606 39.335 -16.035 -2.945 0.554 C2D 7PH 37 7PH C2E C2E C 0 1 N N N 9.743 -14.796 40.813 -16.918 -4.122 0.974 C2E 7PH 38 7PH HO12 HO12 H 0 0 N N N -2.298 -21.776 41.180 3.559 4.617 1.192 HO12 7PH 39 7PH HO13 HO13 H 0 0 N N N -1.113 -24.252 38.916 2.939 2.783 3.685 HO13 7PH 40 7PH H1 H1 H 0 1 N N N -0.243 -22.688 37.180 -0.466 3.912 0.160 H1 7PH 41 7PH H1A H1A H 0 1 N N N -1.622 -21.861 36.236 0.980 4.564 -0.648 H1A 7PH 42 7PH H2 H2 H 0 1 N N N 0.580 -21.021 35.615 -0.364 3.334 -2.283 H2 7PH 43 7PH H3 H3 H 0 1 N N N -1.615 -19.597 35.703 1.325 1.600 -2.958 H3 7PH 44 7PH H3A H3A H 0 1 N N N -1.314 -19.199 37.360 2.065 3.164 -2.537 H3A 7PH 45 7PH H32 H32 H 0 1 N N N 1.710 -16.663 36.213 4.633 1.178 0.325 H32 7PH 46 7PH H32A H32A H 0 0 N N N 1.221 -16.953 34.437 3.893 -0.385 -0.095 H32A 7PH 47 7PH H33 H33 H 0 1 N N N 0.729 -14.818 34.105 5.482 -0.630 -1.983 H33 7PH 48 7PH H33A H33A H 0 0 N N N -0.079 -14.639 35.686 6.222 0.933 -1.563 H33A 7PH 49 7PH H34 H34 H 0 1 N N N 2.746 -15.099 36.154 6.832 0.044 0.669 H34 7PH 50 7PH H34A H34A H 0 0 N N N 2.567 -13.787 34.923 6.092 -1.519 0.249 H34A 7PH 51 7PH H35 H35 H 0 1 N N N 1.328 -12.430 36.381 7.681 -1.764 -1.639 H35 7PH 52 7PH H35A H35A H 0 0 N N N 0.925 -13.778 37.469 8.421 -0.201 -1.219 H35A 7PH 53 7PH H36 H36 H 0 1 N N N 3.027 -13.843 38.400 9.032 -1.090 1.014 H36 7PH 54 7PH H36A H36A H 0 0 N N N 3.802 -13.138 36.925 8.292 -2.653 0.594 H36A 7PH 55 7PH H37 H37 H 0 1 N N N 2.674 -10.889 37.522 9.880 -2.898 -1.294 H37 7PH 56 7PH H37A H37A H 0 0 N N N 2.088 -11.518 38.968 10.621 -1.335 -0.874 H37A 7PH 57 7PH H38 H38 H 0 1 N N N 5.027 -11.871 37.909 11.231 -2.224 1.359 H38 7PH 58 7PH H38A H38A H 0 0 N N N 4.454 -10.753 39.329 10.491 -3.787 0.939 H38A 7PH 59 7PH H39 H39 H 0 1 N N N 3.970 -13.342 40.134 12.080 -4.032 -0.949 H39 7PH 60 7PH H39A H39A H 0 0 N N N 5.611 -13.374 39.390 12.820 -2.469 -0.529 H39A 7PH 61 7PH H3AA H3AA H 0 0 N N N 6.482 -11.811 40.901 13.431 -3.358 1.704 H3AA 7PH 62 7PH H3AB H3AB H 0 0 N N N 4.854 -11.074 41.221 12.691 -4.921 1.283 H3AB 7PH 63 7PH H3B H3B H 0 1 N N N 4.269 -13.329 42.365 14.279 -5.166 -0.604 H3B 7PH 64 7PH H3BA H3BA H 0 0 N N N 6.056 -13.636 42.352 15.019 -3.603 -0.184 H3BA 7PH 65 7PH H3C H3C H 0 1 N N N 5.471 -12.670 44.517 15.630 -4.492 2.048 H3C 7PH 66 7PH H3CA H3CA H 0 0 N N N 6.364 -11.431 43.571 14.890 -6.055 1.628 H3CA 7PH 67 7PH H3CB H3CB H 0 0 N N N 4.578 -11.326 43.729 16.331 -5.488 0.751 H3CB 7PH 68 7PH H22 H22 H 0 1 N N N 2.892 -19.072 38.199 -2.579 -0.287 -1.392 H22 7PH 69 7PH H22A H22A H 0 0 N N N 3.505 -20.603 39.070 -2.571 0.306 0.286 H22A 7PH 70 7PH H23 H23 H 0 1 N N N 5.267 -19.176 37.943 -4.463 1.820 -0.240 H23 7PH 71 7PH H23A H23A H 0 0 N N N 5.201 -20.929 37.497 -4.471 1.227 -1.918 H23A 7PH 72 7PH H24 H24 H 0 1 N N N 4.802 -20.473 35.365 -4.934 -1.069 -1.105 H24 7PH 73 7PH H24A H24A H 0 0 N N N 3.499 -19.243 35.837 -4.926 -0.476 0.573 H24A 7PH 74 7PH H25 H25 H 0 1 N N N 5.049 -17.472 35.874 -6.818 1.038 0.047 H25 7PH 75 7PH H25A H25A H 0 0 N N N 6.460 -18.580 35.793 -6.826 0.445 -1.631 H25A 7PH 76 7PH H26 H26 H 0 1 N N N 6.006 -19.172 33.487 -7.290 -1.851 -0.817 H26 7PH 77 7PH H26A H26A H 0 0 N N N 4.333 -18.470 33.569 -7.282 -1.258 0.861 H26A 7PH 78 7PH H27 H27 H 0 1 N N N 5.879 -17.048 32.252 -9.174 0.257 0.335 H27 7PH 79 7PH H27A H27A H 0 0 N N N 5.272 -16.224 33.777 -9.182 -0.336 -1.344 H27A 7PH 80 7PH H28 H28 H 0 1 N N N 7.899 -17.629 34.023 -9.645 -2.632 -0.530 H28 7PH 81 7PH H28A H28A H 0 0 N N N 7.878 -16.163 32.949 -9.637 -2.039 1.148 H28A 7PH 82 7PH H29 H29 H 0 1 N N N 8.031 -14.854 34.797 -11.529 -0.525 0.622 H29 7PH 83 7PH H29A H29A H 0 0 N N N 6.395 -15.497 35.316 -11.537 -1.118 -1.056 H29A 7PH 84 7PH H2A H2A H 0 1 N N N 7.602 -17.389 36.497 -12.001 -3.414 -0.243 H2A 7PH 85 7PH H2AA H2AA H 0 0 N N N 9.159 -16.561 36.139 -11.993 -2.821 1.436 H2AA 7PH 86 7PH H2B H2B H 0 1 N N N 8.091 -14.466 37.270 -13.885 -1.307 0.909 H2B 7PH 87 7PH H2BA H2BA H 0 0 N N N 6.851 -15.606 37.908 -13.893 -1.900 -0.769 H2BA 7PH 88 7PH H2C H2C H 0 1 N N N 8.329 -16.571 39.394 -14.356 -4.196 0.045 H2C 7PH 89 7PH H2CA H2CA H 0 0 N N N 9.688 -16.511 38.269 -14.349 -3.603 1.723 H2CA 7PH 90 7PH H2D H2D H 0 1 N N N 10.192 -14.230 38.775 -16.240 -2.089 1.197 H2D 7PH 91 7PH H2DA H2DA H 0 0 N N N 8.479 -13.901 39.319 -16.248 -2.682 -0.482 H2DA 7PH 92 7PH H2E H2E H 0 1 N N N 10.840 -14.841 40.880 -16.712 -4.978 0.332 H2E 7PH 93 7PH H2EA H2EA H 0 0 N N N 9.374 -13.950 41.411 -16.704 -4.385 2.010 H2EA 7PH 94 7PH H2EB H2EB H 0 0 N N N 9.314 -15.733 41.198 -17.967 -3.841 0.880 H2EB 7PH 95 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7PH O11 P SING N N 1 7PH O14 P DOUB N N 2 7PH P O13 SING N N 3 7PH P O12 SING N N 4 7PH O12 HO12 SING N N 5 7PH O13 HO13 SING N N 6 7PH C1 O11 SING N N 7 7PH C2 C1 SING N N 8 7PH C1 H1 SING N N 9 7PH C1 H1A SING N N 10 7PH C3 C2 SING N N 11 7PH C2 O21 SING N N 12 7PH C2 H2 SING N N 13 7PH O31 C3 SING N N 14 7PH C3 H3 SING N N 15 7PH C3 H3A SING N N 16 7PH C31 O31 SING N N 17 7PH C31 O32 DOUB N N 18 7PH C32 C31 SING N N 19 7PH C33 C32 SING N N 20 7PH C32 H32 SING N N 21 7PH C32 H32A SING N N 22 7PH C33 C34 SING N N 23 7PH C33 H33 SING N N 24 7PH C33 H33A SING N N 25 7PH C34 C35 SING N N 26 7PH C34 H34 SING N N 27 7PH C34 H34A SING N N 28 7PH C35 C36 SING N N 29 7PH C35 H35 SING N N 30 7PH C35 H35A SING N N 31 7PH C36 C37 SING N N 32 7PH C36 H36 SING N N 33 7PH C36 H36A SING N N 34 7PH C37 C38 SING N N 35 7PH C37 H37 SING N N 36 7PH C37 H37A SING N N 37 7PH C38 C39 SING N N 38 7PH C38 H38 SING N N 39 7PH C38 H38A SING N N 40 7PH C39 C3A SING N N 41 7PH C39 H39 SING N N 42 7PH C39 H39A SING N N 43 7PH C3A C3B SING N N 44 7PH C3A H3AA SING N N 45 7PH C3A H3AB SING N N 46 7PH C3B C3C SING N N 47 7PH C3B H3B SING N N 48 7PH C3B H3BA SING N N 49 7PH C3C H3C SING N N 50 7PH C3C H3CA SING N N 51 7PH C3C H3CB SING N N 52 7PH C21 O21 SING N N 53 7PH O22 C21 DOUB N N 54 7PH C21 C22 SING N N 55 7PH C23 C22 SING N N 56 7PH C22 H22 SING N N 57 7PH C22 H22A SING N N 58 7PH C24 C23 SING N N 59 7PH C23 H23 SING N N 60 7PH C23 H23A SING N N 61 7PH C25 C24 SING N N 62 7PH C24 H24 SING N N 63 7PH C24 H24A SING N N 64 7PH C26 C25 SING N N 65 7PH C25 H25 SING N N 66 7PH C25 H25A SING N N 67 7PH C27 C26 SING N N 68 7PH C26 H26 SING N N 69 7PH C26 H26A SING N N 70 7PH C27 C28 SING N N 71 7PH C27 H27 SING N N 72 7PH C27 H27A SING N N 73 7PH C28 C29 SING N N 74 7PH C28 H28 SING N N 75 7PH C28 H28A SING N N 76 7PH C29 C2A SING N N 77 7PH C29 H29 SING N N 78 7PH C29 H29A SING N N 79 7PH C2A C2B SING N N 80 7PH C2A H2A SING N N 81 7PH C2A H2AA SING N N 82 7PH C2B C2C SING N N 83 7PH C2B H2B SING N N 84 7PH C2B H2BA SING N N 85 7PH C2C C2D SING N N 86 7PH C2C H2C SING N N 87 7PH C2C H2CA SING N N 88 7PH C2D C2E SING N N 89 7PH C2D H2D SING N N 90 7PH C2D H2DA SING N N 91 7PH C2E H2E SING N N 92 7PH C2E H2EA SING N N 93 7PH C2E H2EB SING N N 94 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7PH SMILES ACDLabs 10.04 "O=P(O)(OCC(OC(=O)CCCCCCCCCCCCC)COC(=O)CCCCCCCCCCC)O" 7PH SMILES_CANONICAL CACTVS 3.341 "CCCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCC)CO[P](O)(O)=O" 7PH SMILES CACTVS 3.341 "CCCCCCCCCCCCCC(=O)O[CH](COC(=O)CCCCCCCCCCC)CO[P](O)(O)=O" 7PH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCCCC)COP(=O)(O)O" 7PH SMILES "OpenEye OEToolkits" 1.5.0 "CCCCCCCCCCCCCC(=O)OC(COC(=O)CCCCCCCCCCC)COP(=O)(O)O" 7PH InChI InChI 1.03 "InChI=1S/C29H57O8P/c1-3-5-7-9-11-13-14-16-18-20-22-24-29(31)37-27(26-36-38(32,33)34)25-35-28(30)23-21-19-17-15-12-10-8-6-4-2/h27H,3-26H2,1-2H3,(H2,32,33,34)/t27-/m1/s1" 7PH InChIKey InChI 1.03 UYOIGTVMJVHOSC-HHHXNRCGSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7PH "SYSTEMATIC NAME" ACDLabs 10.04 "(1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate" 7PH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R)-1-dodecanoyloxy-3-phosphonooxy-propan-2-yl] tetradecanoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7PH "Create component" 2008-04-28 RCSB 7PH "Modify descriptor" 2011-06-04 RCSB 7PH "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 7PH _pdbx_chem_comp_synonyms.name "PHOSPHATIDIC ACID" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##