data_7PM # _chem_comp.id 7PM _chem_comp.name "(2R)-[(2-amino-6-oxo-6,9-dihydro-1H-purin-8-yl)sulfanyl](phenyl)acetic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H11 N5 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-11-28 _chem_comp.pdbx_modified_date 2017-12-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 317.323 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7PM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5U0Z _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7PM C1 C1 C 0 1 Y N N 1.361 -2.768 23.985 6.097 -0.292 -0.543 C1 7PM 1 7PM C2 C2 C 0 1 Y N N 1.840 -1.542 23.553 5.385 0.216 -1.613 C2 7PM 2 7PM C3 C3 C 0 1 Y N N 2.243 -3.763 24.355 5.440 -0.638 0.623 C3 7PM 3 7PM C4 C4 C 0 1 Y N N 3.199 -1.304 23.489 4.015 0.378 -1.518 C4 7PM 4 7PM C5 C5 C 0 1 Y N N 3.603 -3.519 24.289 4.071 -0.471 0.720 C5 7PM 5 7PM C6 C6 C 0 1 Y N N 4.093 -2.291 23.860 3.358 0.032 -0.352 C6 7PM 6 7PM C7 C7 C 0 1 Y N N 9.290 0.171 24.557 -2.412 0.269 -0.214 C7 7PM 7 7PM C8 C8 C 0 1 Y N N 9.612 -0.177 25.835 -2.818 -1.045 0.039 C8 7PM 8 7PM C9 C9 C 0 1 Y N N 7.797 -1.190 25.179 -0.610 -0.932 -0.003 C9 7PM 9 7PM C10 C10 C 0 1 N N N 10.127 1.104 23.848 -3.403 1.259 -0.398 C10 7PM 10 7PM C11 C11 C 0 1 N N N 11.405 1.071 25.954 -5.035 -0.406 -0.072 C11 7PM 11 7PM C12 C12 C 0 1 N N N 6.148 -2.998 22.751 1.549 1.155 0.883 C12 7PM 12 7PM C13 C13 C 0 1 N N R 5.568 -2.011 23.780 1.865 0.209 -0.247 C13 7PM 13 7PM N14 N1 N 0 1 Y N N 8.158 -0.462 24.131 -1.053 0.279 -0.228 N14 7PM 14 7PM N15 N2 N 0 1 N N N 10.634 0.227 26.583 -4.122 -1.336 0.101 N15 7PM 15 7PM N16 N3 N 0 1 Y N N 8.657 -1.054 26.228 -1.668 -1.783 0.173 N16 7PM 16 7PM N17 N4 N 0 1 N N N 11.189 1.505 24.642 -4.701 0.891 -0.322 N17 7PM 17 7PM N18 N5 N 0 1 N N N 12.508 1.623 26.538 -6.362 -0.752 0.000 N18 7PM 18 7PM O19 O1 O 0 1 N N N 5.760 -2.761 21.580 0.804 2.087 0.699 O19 7PM 19 7PM O20 O2 O 0 1 N N N 9.936 1.496 22.708 -3.094 2.418 -0.621 O20 7PM 20 7PM O21 O3 O 0 1 N N N 6.905 -3.939 23.129 2.096 0.961 2.093 O21 7PM 21 7PM S22 S1 S 0 1 N N N 6.417 -2.263 25.367 1.089 -1.395 0.073 S22 7PM 22 7PM H1 H1 H 0 1 N N N 0.297 -2.945 24.032 7.167 -0.422 -0.619 H1 7PM 23 7PM H2 H2 H 0 1 N N N 1.146 -0.767 23.264 5.898 0.486 -2.524 H2 7PM 24 7PM H3 H3 H 0 1 N N N 1.876 -4.721 24.692 5.996 -1.038 1.458 H3 7PM 25 7PM H4 H4 H 0 1 N N N 3.564 -0.346 23.149 3.459 0.775 -2.354 H4 7PM 26 7PM H5 H5 H 0 1 N N N 4.296 -4.296 24.576 3.558 -0.742 1.631 H5 7PM 27 7PM H6 H6 H 0 1 N N N 5.757 -0.973 23.469 1.482 0.618 -1.182 H6 7PM 28 7PM H8 H8 H 0 1 N N N 8.595 -1.512 27.115 -1.615 -2.735 0.354 H8 7PM 29 7PM H9 H9 H 0 1 N N N 11.846 2.149 24.250 -5.398 1.554 -0.445 H9 7PM 30 7PM H10 H10 H 0 1 N N N 12.748 1.384 27.479 -6.615 -1.671 0.177 H10 7PM 31 7PM H11 H11 H 0 1 N N N 13.076 2.267 26.025 -7.046 -0.076 -0.125 H11 7PM 32 7PM H12 H12 H 0 1 N N N 7.153 -4.467 22.379 1.864 1.594 2.786 H12 7PM 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7PM O19 C12 DOUB N N 1 7PM O20 C10 DOUB N N 2 7PM C12 O21 SING N N 3 7PM C12 C13 SING N N 4 7PM C4 C2 DOUB Y N 5 7PM C4 C6 SING Y N 6 7PM C2 C1 SING Y N 7 7PM C13 C6 SING N N 8 7PM C13 S22 SING N N 9 7PM C10 C7 SING N N 10 7PM C10 N17 SING N N 11 7PM C6 C5 DOUB Y N 12 7PM C1 C3 DOUB Y N 13 7PM N14 C7 SING Y N 14 7PM N14 C9 DOUB Y N 15 7PM C5 C3 SING Y N 16 7PM C7 C8 DOUB Y N 17 7PM N17 C11 SING N N 18 7PM C9 S22 SING N N 19 7PM C9 N16 SING Y N 20 7PM C8 N16 SING Y N 21 7PM C8 N15 SING N N 22 7PM C11 N18 SING N N 23 7PM C11 N15 DOUB N N 24 7PM C1 H1 SING N N 25 7PM C2 H2 SING N N 26 7PM C3 H3 SING N N 27 7PM C4 H4 SING N N 28 7PM C5 H5 SING N N 29 7PM C13 H6 SING N N 30 7PM N16 H8 SING N N 31 7PM N17 H9 SING N N 32 7PM N18 H10 SING N N 33 7PM N18 H11 SING N N 34 7PM O21 H12 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7PM SMILES ACDLabs 12.01 "c1ccc(cc1)C(C(O)=O)Sc3nc2c(C(NC(N)=N2)=O)n3" 7PM InChI InChI 1.03 "InChI=1S/C13H11N5O3S/c14-12-16-9-7(10(19)18-12)15-13(17-9)22-8(11(20)21)6-4-2-1-3-5-6/h1-5,8H,(H,20,21)(H4,14,15,16,17,18,19)/t8-/m1/s1" 7PM InChIKey InChI 1.03 CGEIBNIHDCYIDG-MRVPVSSYSA-N 7PM SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2[nH]c(S[C@@H](C(O)=O)c3ccccc3)nc2C(=O)N1" 7PM SMILES CACTVS 3.385 "NC1=Nc2[nH]c(S[CH](C(O)=O)c3ccccc3)nc2C(=O)N1" 7PM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)[C@H](C(=O)O)Sc2[nH]c3c(n2)C(=O)NC(=N3)N" 7PM SMILES "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)C(C(=O)O)Sc2[nH]c3c(n2)C(=O)NC(=N3)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7PM "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-[(2-amino-6-oxo-6,9-dihydro-1H-purin-8-yl)sulfanyl](phenyl)acetic acid" 7PM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-2-[(2-azanyl-6-oxidanylidene-1,9-dihydropurin-8-yl)sulfanyl]-2-phenyl-ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7PM "Create component" 2016-11-28 RCSB 7PM "Other modification" 2016-12-08 RCSB 7PM "Initial release" 2017-12-06 RCSB #