data_7PZ # _chem_comp.id 7PZ _chem_comp.name "1-[(5~{R},8~{R},15~{S},18~{S})-15,18-bis(4-azanylbutyl)-4,7,14,17,20-pentakis(oxidanylidene)-5-propan-2-yl-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H56 N10 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-12 _chem_comp.pdbx_modified_date 2022-08-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 672.862 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7PZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7VLG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7PZ C10 C1 C 0 1 N N N 10.253 -15.943 7.790 -5.871 0.347 2.638 C10 7PZ 1 7PZ C20 C2 C 0 1 N N N 4.792 -14.163 5.838 -0.634 -4.641 -0.743 C20 7PZ 2 7PZ C21 C3 C 0 1 N N N 3.610 -14.493 6.812 0.834 -4.545 -1.162 C21 7PZ 3 7PZ C22 C4 C 0 1 N N N 2.509 -15.257 6.049 1.069 -3.225 -1.900 C22 7PZ 4 7PZ C24 C5 C 0 1 N N N 2.099 -14.379 3.728 2.710 -1.485 -1.624 C24 7PZ 5 7PZ C26 C6 C 0 1 N N S 1.374 -13.362 2.895 4.127 -1.000 -1.446 C26 7PZ 6 7PZ C28 C7 C 0 1 N N N 2.330 -11.031 3.174 3.150 1.209 -1.455 C28 7PZ 7 7PZ C01 C8 C 0 1 Y N N 10.733 -11.351 1.502 -3.364 5.507 0.417 C01 7PZ 8 7PZ C02 C9 C 0 1 Y N N 10.110 -12.543 1.773 -3.277 4.375 -0.369 C02 7PZ 9 7PZ C03 C10 C 0 1 N N N 10.952 -13.766 2.298 -4.409 3.380 -0.385 C03 7PZ 10 7PZ C05 C11 C 0 1 N N N 10.061 -15.416 3.958 -4.662 1.023 0.067 C05 7PZ 11 7PZ C07 C12 C 0 1 N N R 9.563 -15.564 5.388 -4.295 -0.245 0.792 C07 7PZ 12 7PZ C08 C13 C 0 1 N N N 10.709 -15.885 6.323 -5.488 -0.728 1.618 C08 7PZ 13 7PZ C09 C14 C 0 1 N N N 11.761 -14.797 6.295 -5.111 -2.016 2.353 C09 7PZ 14 7PZ C12 C15 C 0 1 N N N 7.649 -13.971 5.116 -3.214 -2.332 0.274 C12 7PZ 15 7PZ C14 C16 C 0 1 N N R 6.841 -12.746 5.653 -2.818 -3.432 -0.676 C14 7PZ 16 7PZ C16 C17 C 0 1 N N N 8.643 -11.026 5.772 -4.317 -5.301 -0.118 C16 7PZ 17 7PZ C19 C18 C 0 1 N N N 5.765 -13.215 6.617 -1.332 -3.306 -1.016 C19 7PZ 18 7PZ C30 C19 C 0 1 N N S 3.467 -10.076 2.759 3.070 2.631 -0.964 C30 7PZ 19 7PZ C32 C20 C 0 1 N N N 5.718 -11.003 2.086 1.126 4.035 -1.162 C32 7PZ 20 7PZ C33 C21 C 0 1 N N N 6.532 -11.608 0.919 0.117 4.817 -1.962 C33 7PZ 21 7PZ C34 C22 C 0 1 Y N N 8.030 -11.524 1.127 -1.110 5.061 -1.121 C34 7PZ 22 7PZ C35 C23 C 0 1 Y N N 8.726 -12.643 1.627 -2.151 4.152 -1.139 C35 7PZ 23 7PZ C36 C24 C 0 1 Y N N 8.658 -10.353 0.812 -1.198 6.195 -0.335 C36 7PZ 24 7PZ C37 C25 C 0 1 Y N N 10.023 -10.269 0.993 -2.324 6.418 0.435 C37 7PZ 25 7PZ C39 C26 C 0 1 N N N 3.040 -8.641 2.457 2.575 2.648 0.484 C39 7PZ 26 7PZ C40 C27 C 0 1 N N N 2.393 -8.667 1.107 3.503 1.793 1.349 C40 7PZ 27 7PZ C41 C28 C 0 1 N N N 2.524 -7.145 0.703 3.091 1.921 2.818 C41 7PZ 28 7PZ C42 C29 C 0 1 N N N 1.553 -6.766 -0.434 4.019 1.066 3.683 C42 7PZ 29 7PZ C44 C30 C 0 1 N N N 0.811 -14.056 1.625 4.856 -1.905 -0.450 C44 7PZ 30 7PZ C45 C31 C 0 1 N N N 0.141 -12.968 0.745 6.326 -1.489 -0.364 C45 7PZ 31 7PZ C46 C32 C 0 1 N N N -1.172 -12.374 1.321 7.055 -2.394 0.631 C46 7PZ 32 7PZ C47 C33 C 0 1 N N N -1.621 -11.380 0.234 8.524 -1.977 0.716 C47 7PZ 33 7PZ N04 N1 N 0 1 N N N 10.503 -14.081 3.647 -3.985 2.169 0.348 N04 7PZ 34 7PZ N11 N2 N 0 1 N N N 8.846 -14.378 5.806 -3.934 -1.275 -0.209 N11 7PZ 35 7PZ N15 N3 N 0 1 N N N 7.751 -11.938 6.453 -3.067 -4.732 -0.049 N15 7PZ 36 7PZ N17 N4 N 0 1 N N N 8.612 -10.809 4.499 -5.333 -4.650 -0.777 N17 7PZ 37 7PZ N18 N5 N 0 1 N N N 9.568 -10.429 6.657 -4.538 -6.457 0.440 N18 7PZ 38 7PZ N23 N6 N 0 1 N N N 1.840 -14.323 5.131 2.485 -2.829 -1.720 N23 7PZ 39 7PZ N27 N7 N 0 1 N N N 2.350 -12.337 2.582 4.098 0.383 -0.931 N27 7PZ 40 7PZ N31 N8 N 0 1 N N N 4.359 -10.632 1.729 2.124 3.378 -1.824 N31 7PZ 41 7PZ N43 N9 N 0 1 N N N 1.791 -5.314 -0.826 3.623 1.188 5.093 N43 7PZ 42 7PZ N48 N10 N 0 1 N N N -2.998 -10.916 0.444 9.224 -2.846 1.672 N48 7PZ 43 7PZ O06 O1 O 0 1 N N N 10.073 -16.302 3.152 -5.553 1.023 -0.757 O06 7PZ 44 7PZ O13 O2 O 0 1 N N N 7.312 -14.616 4.148 -2.900 -2.383 1.444 O13 7PZ 45 7PZ O25 O3 O 0 1 N N N 2.876 -15.199 3.341 1.790 -0.697 -1.682 O25 7PZ 46 7PZ O29 O4 O 0 1 N N N 1.498 -10.719 3.951 2.383 0.806 -2.303 O29 7PZ 47 7PZ O38 O5 O 0 1 N N N 6.117 -10.896 3.198 1.055 3.990 0.048 O38 7PZ 48 7PZ H101 H1 H 0 0 N N N 11.114 -16.178 8.433 -6.721 0.002 3.227 H101 7PZ 49 7PZ H103 H2 H 0 0 N N N 9.833 -14.969 8.082 -5.025 0.539 3.298 H103 7PZ 50 7PZ H102 H3 H 0 0 N N N 9.486 -16.723 7.905 -6.140 1.264 2.114 H102 7PZ 51 7PZ H202 H4 H 0 0 N N N 4.412 -13.659 4.937 -1.124 -5.430 -1.314 H202 7PZ 52 7PZ H201 H5 H 0 0 N N N 5.314 -15.087 5.548 -0.694 -4.871 0.320 H201 7PZ 53 7PZ H211 H6 H 0 0 N N N 3.981 -15.115 7.640 1.468 -4.584 -0.276 H211 7PZ 54 7PZ H212 H7 H 0 0 N N N 3.195 -13.557 7.214 1.079 -5.378 -1.821 H212 7PZ 55 7PZ H222 H8 H 0 0 N N N 1.777 -15.663 6.763 0.858 -3.356 -2.961 H222 7PZ 56 7PZ H221 H9 H 0 0 N N N 2.959 -16.081 5.476 0.416 -2.455 -1.489 H221 7PZ 57 7PZ H261 H10 H 0 0 N N N 0.540 -12.936 3.471 4.643 -1.022 -2.405 H261 7PZ 58 7PZ H011 H11 H 0 0 N N N 11.792 -11.251 1.687 -4.244 5.681 1.019 H011 7PZ 59 7PZ H031 H12 H 0 0 N N N 10.796 -14.635 1.641 -5.283 3.813 0.100 H031 7PZ 60 7PZ H032 H13 H 0 0 N N N 12.020 -13.504 2.313 -4.651 3.118 -1.415 H032 7PZ 61 7PZ H071 H14 H 0 0 N N N 8.868 -16.416 5.410 -3.444 -0.058 1.447 H071 7PZ 62 7PZ H081 H15 H 0 0 N N N 11.161 -16.847 6.041 -6.333 -0.921 0.958 H081 7PZ 63 7PZ H093 H16 H 0 0 N N N 12.578 -15.059 6.983 -4.265 -1.824 3.013 H093 7PZ 64 7PZ H091 H17 H 0 0 N N N 12.159 -14.698 5.274 -5.961 -2.361 2.942 H091 7PZ 65 7PZ H092 H18 H 0 0 N N N 11.310 -13.843 6.607 -4.838 -2.782 1.627 H092 7PZ 66 7PZ H141 H19 H 0 0 N N N 6.406 -12.176 4.819 -3.407 -3.352 -1.590 H141 7PZ 67 7PZ H192 H20 H 0 0 N N N 6.226 -13.760 7.454 -0.882 -2.528 -0.399 H192 7PZ 68 7PZ H191 H21 H 0 0 N N N 5.210 -12.349 7.006 -1.220 -3.046 -2.069 H191 7PZ 69 7PZ H1 H22 H 0 1 N N N 4.092 -9.991 3.660 4.056 3.093 -1.019 H1 7PZ 70 7PZ H332 H23 H 0 0 N N N 6.277 -11.065 -0.003 0.550 5.772 -2.259 H332 7PZ 71 7PZ H331 H24 H 0 0 N N N 6.253 -12.667 0.811 -0.159 4.250 -2.851 H331 7PZ 72 7PZ H351 H25 H 0 0 N N N 8.203 -13.551 1.889 -2.085 3.267 -1.755 H351 7PZ 73 7PZ H361 H26 H 0 0 N N N 8.099 -9.512 0.430 -0.385 6.907 -0.322 H361 7PZ 74 7PZ H371 H27 H 0 0 N N N 10.543 -9.358 0.738 -2.392 7.304 1.049 H371 7PZ 75 7PZ H391 H28 H 0 0 N N N 3.917 -7.978 2.446 2.573 3.673 0.855 H391 7PZ 76 7PZ H392 H29 H 0 0 N N N 2.324 -8.290 3.215 1.564 2.244 0.526 H392 7PZ 77 7PZ H401 H30 H 0 0 N N N 1.341 -8.984 1.166 3.430 0.751 1.041 H401 7PZ 78 7PZ H402 H31 H 0 0 N N N 2.935 -9.322 0.408 4.530 2.137 1.230 H402 7PZ 79 7PZ H411 H32 H 0 0 N N N 3.554 -6.953 0.369 3.164 2.963 3.126 H411 7PZ 80 7PZ H412 H33 H 0 0 N N N 2.302 -6.523 1.583 2.063 1.577 2.938 H412 7PZ 81 7PZ H422 H34 H 0 0 N N N 0.516 -6.890 -0.090 3.945 0.023 3.375 H422 7PZ 82 7PZ H421 H35 H 0 0 N N N 1.731 -7.416 -1.303 5.046 1.409 3.563 H421 7PZ 83 7PZ H441 H36 H 0 0 N N N 0.068 -14.815 1.912 4.393 -1.811 0.532 H441 7PZ 84 7PZ H442 H37 H 0 0 N N N 1.629 -14.536 1.068 4.790 -2.940 -0.785 H442 7PZ 85 7PZ H452 H38 H 0 0 N N N -0.087 -13.414 -0.234 6.788 -1.583 -1.347 H452 7PZ 86 7PZ H451 H39 H 0 0 N N N 0.859 -12.145 0.614 6.391 -0.454 -0.030 H451 7PZ 87 7PZ H462 H40 H 0 0 N N N -0.985 -11.857 2.274 6.593 -2.299 1.613 H462 7PZ 88 7PZ H461 H41 H 0 0 N N N -1.927 -13.160 1.472 6.989 -3.429 0.296 H461 7PZ 89 7PZ H472 H42 H 0 0 N N N -1.559 -11.875 -0.746 8.987 -2.071 -0.266 H472 7PZ 90 7PZ H471 H43 H 0 0 N N N -0.948 -10.510 0.249 8.590 -0.942 1.051 H471 7PZ 91 7PZ H041 H44 H 0 0 N N N 10.502 -13.374 4.354 -3.262 2.190 0.994 H041 7PZ 92 7PZ H111 H45 H 0 0 N N N 9.183 -13.839 6.578 -4.190 -1.204 -1.142 H111 7PZ 93 7PZ H151 H46 H 0 0 N N N 7.759 -12.012 7.450 -2.351 -5.191 0.416 H151 7PZ 94 7PZ H2 H47 H 0 1 N N N 9.272 -10.184 4.082 -5.168 -3.789 -1.193 H2 7PZ 95 7PZ H171 H48 H 0 0 N N N 7.928 -11.266 3.930 -6.215 -5.051 -0.826 H171 7PZ 96 7PZ H181 H49 H 0 0 N N N 9.442 -10.743 7.598 -3.822 -6.917 0.905 H181 7PZ 97 7PZ H231 H50 H 0 0 N N N 1.200 -13.645 5.492 3.203 -3.479 -1.672 H231 7PZ 98 7PZ H271 H51 H 0 0 N N N 3.071 -12.551 1.923 4.721 0.688 -0.253 H271 7PZ 99 7PZ H311 H52 H 0 0 N N N 4.033 -10.753 0.792 2.207 3.399 -2.790 H311 7PZ 100 7PZ H432 H53 H 0 0 N N N 1.165 -5.060 -1.563 2.654 0.937 5.220 H432 7PZ 101 7PZ H3 H54 H 0 1 N N N 1.630 -4.724 -0.034 4.221 0.632 5.686 H3 7PZ 102 7PZ H482 H56 H 0 0 N N N -3.248 -10.275 -0.281 10.198 -2.591 1.747 H482 7PZ 103 7PZ H481 H57 H 0 0 N N N -3.620 -11.699 0.426 8.775 -2.826 2.575 H481 7PZ 104 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7PZ N43 C42 SING N N 1 7PZ C42 C41 SING N N 2 7PZ C47 N48 SING N N 3 7PZ C47 C46 SING N N 4 7PZ C41 C40 SING N N 5 7PZ C45 C46 SING N N 6 7PZ C45 C44 SING N N 7 7PZ C36 C37 DOUB Y N 8 7PZ C36 C34 SING Y N 9 7PZ C33 C34 SING N N 10 7PZ C33 C32 SING N N 11 7PZ C37 C01 SING Y N 12 7PZ C40 C39 SING N N 13 7PZ C34 C35 DOUB Y N 14 7PZ C01 C02 DOUB Y N 15 7PZ C44 C26 SING N N 16 7PZ C35 C02 SING Y N 17 7PZ N31 C32 SING N N 18 7PZ N31 C30 SING N N 19 7PZ C02 C03 SING N N 20 7PZ C32 O38 DOUB N N 21 7PZ C03 N04 SING N N 22 7PZ C39 C30 SING N N 23 7PZ N27 C26 SING N N 24 7PZ N27 C28 SING N N 25 7PZ C30 C28 SING N N 26 7PZ C26 C24 SING N N 27 7PZ O06 C05 DOUB N N 28 7PZ C28 O29 DOUB N N 29 7PZ O25 C24 DOUB N N 30 7PZ N04 C05 SING N N 31 7PZ C24 N23 SING N N 32 7PZ C05 C07 SING N N 33 7PZ O13 C12 DOUB N N 34 7PZ N17 C16 SING N N 35 7PZ C12 C14 SING N N 36 7PZ C12 N11 SING N N 37 7PZ N23 C22 SING N N 38 7PZ C07 N11 SING N N 39 7PZ C07 C08 SING N N 40 7PZ C14 N15 SING N N 41 7PZ C14 C19 SING N N 42 7PZ C16 N15 SING N N 43 7PZ C16 N18 DOUB N N 44 7PZ C20 C19 SING N N 45 7PZ C20 C21 SING N N 46 7PZ C22 C21 SING N N 47 7PZ C09 C08 SING N N 48 7PZ C08 C10 SING N N 49 7PZ C10 H101 SING N N 50 7PZ C10 H103 SING N N 51 7PZ C10 H102 SING N N 52 7PZ C20 H202 SING N N 53 7PZ C20 H201 SING N N 54 7PZ C21 H211 SING N N 55 7PZ C21 H212 SING N N 56 7PZ C22 H222 SING N N 57 7PZ C22 H221 SING N N 58 7PZ C26 H261 SING N N 59 7PZ C01 H011 SING N N 60 7PZ C03 H031 SING N N 61 7PZ C03 H032 SING N N 62 7PZ C07 H071 SING N N 63 7PZ C08 H081 SING N N 64 7PZ C09 H093 SING N N 65 7PZ C09 H091 SING N N 66 7PZ C09 H092 SING N N 67 7PZ C14 H141 SING N N 68 7PZ C19 H192 SING N N 69 7PZ C19 H191 SING N N 70 7PZ C30 H1 SING N N 71 7PZ C33 H332 SING N N 72 7PZ C33 H331 SING N N 73 7PZ C35 H351 SING N N 74 7PZ C36 H361 SING N N 75 7PZ C37 H371 SING N N 76 7PZ C39 H391 SING N N 77 7PZ C39 H392 SING N N 78 7PZ C40 H401 SING N N 79 7PZ C40 H402 SING N N 80 7PZ C41 H411 SING N N 81 7PZ C41 H412 SING N N 82 7PZ C42 H422 SING N N 83 7PZ C42 H421 SING N N 84 7PZ C44 H441 SING N N 85 7PZ C44 H442 SING N N 86 7PZ C45 H452 SING N N 87 7PZ C45 H451 SING N N 88 7PZ C46 H462 SING N N 89 7PZ C46 H461 SING N N 90 7PZ C47 H472 SING N N 91 7PZ C47 H471 SING N N 92 7PZ N04 H041 SING N N 93 7PZ N11 H111 SING N N 94 7PZ N15 H151 SING N N 95 7PZ N17 H2 SING N N 96 7PZ N17 H171 SING N N 97 7PZ N18 H181 SING N N 98 7PZ N23 H231 SING N N 99 7PZ N27 H271 SING N N 100 7PZ N31 H311 SING N N 101 7PZ N43 H432 SING N N 102 7PZ N43 H3 SING N N 103 7PZ N48 H482 SING N N 104 7PZ N48 H481 SING N N 105 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7PZ InChI InChI 1.03 "InChI=1S/C33H56N10O5/c1-21(2)28-32(48)39-20-23-11-9-10-22(18-23)19-27(44)40-25(13-4-7-16-35)30(46)41-24(12-3-6-15-34)29(45)38-17-8-5-14-26(31(47)43-28)42-33(36)37/h9-11,18,21,24-26,28H,3-8,12-17,19-20,34-35H2,1-2H3,(H,38,45)(H,39,48)(H,40,44)(H,41,46)(H,43,47)(H4,36,37,42)/t24-,25-,26+,28+/m0/s1" 7PZ InChIKey InChI 1.03 RGYZTJZNDKRVTG-WDTRASESSA-N 7PZ SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H]1NC(=O)[C@@H](CCCCNC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCCN)NC(=O)Cc2cccc(CNC1=O)c2)NC(N)=N" 7PZ SMILES CACTVS 3.385 "CC(C)[CH]1NC(=O)[CH](CCCCNC(=O)[CH](CCCCN)NC(=O)[CH](CCCCN)NC(=O)Cc2cccc(CNC1=O)c2)NC(N)=N" 7PZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\N)/N[C@@H]1CCCCNC(=O)[C@@H](NC(=O)[C@@H](NC(=O)Cc2cccc(c2)CNC(=O)[C@H](NC1=O)C(C)C)CCCCN)CCCCN" 7PZ SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C1C(=O)NCc2cccc(c2)CC(=O)NC(C(=O)NC(C(=O)NCCCCC(C(=O)N1)NC(=N)N)CCCCN)CCCCN" # _pdbx_chem_comp_identifier.comp_id 7PZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[(5~{R},8~{R},15~{S},18~{S})-15,18-bis(4-azanylbutyl)-4,7,14,17,20-pentakis(oxidanylidene)-5-propan-2-yl-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7PZ "Create component" 2021-10-12 PDBJ 7PZ "Initial release" 2022-08-10 RCSB #