data_7Q3 # _chem_comp.id 7Q3 _chem_comp.name "1-[(3~{S},6~{R},18~{R})-3,6-bis(4-azanylbutyl)-2,5,8,11,14,17-hexakis(oxidanylidene)-1,4,7,10,13,16-hexazacyclodocos-18-yl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H47 N11 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-12 _chem_comp.pdbx_modified_date 2022-08-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 597.711 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7Q3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7VLH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7Q3 C13 C1 C 0 1 N N N -4.535 8.919 -18.118 -3.265 -2.534 -1.276 C13 7Q3 1 7Q3 C15 C2 C 0 1 N N N -4.155 6.538 -18.815 -3.902 -0.460 -0.218 C15 7Q3 2 7Q3 C17 C3 C 0 1 N N R -4.319 5.031 -18.625 -4.516 0.328 0.911 C17 7Q3 3 7Q3 C22 C4 C 0 1 N N N -5.756 4.600 -18.901 -4.660 1.792 0.491 C22 7Q3 4 7Q3 C24 C5 C 0 1 N N N -8.077 4.459 -18.079 -2.948 3.612 0.511 C24 7Q3 5 7Q3 C01 C6 C 0 1 N N R -3.751 3.376 -13.060 4.266 1.033 -0.145 C01 7Q3 6 7Q3 C03 C7 C 0 1 N N N -2.355 4.891 -14.438 3.547 -1.211 -0.633 C03 7Q3 7 7Q3 C05 C8 C 0 1 N N N -1.514 5.201 -15.671 3.415 -2.404 -1.545 C05 7Q3 8 7Q3 C07 C9 C 0 1 N N N -0.754 7.638 -15.816 1.214 -3.379 -1.725 C07 7Q3 9 7Q3 C09 C10 C 0 1 N N N -1.099 9.072 -16.246 0.114 -4.287 -1.237 C09 7Q3 10 7Q3 C11 C11 C 0 1 N N N -3.025 9.031 -17.890 -1.930 -3.082 -0.842 C11 7Q3 11 7Q3 C19 C12 C 0 1 N N N -2.018 4.486 -19.662 -5.948 -1.288 2.089 C19 7Q3 12 7Q3 C23 C13 C 0 1 N N N -6.639 4.776 -17.670 -3.778 2.668 1.384 C23 7Q3 13 7Q3 C25 C14 C 0 1 N N N -9.028 4.731 -16.916 -1.750 4.126 1.312 C25 7Q3 14 7Q3 C27 C15 C 0 1 N N N -8.080 4.906 -14.592 0.590 3.815 0.852 C27 7Q3 15 7Q3 C29 C16 C 0 1 N N S -7.549 4.223 -13.340 1.811 3.948 -0.022 C29 7Q3 16 7Q3 C30 C17 C 0 1 N N N -8.232 4.718 -12.063 1.429 3.684 -1.480 C30 7Q3 17 7Q3 C31 C18 C 0 1 N N N -7.568 4.117 -10.821 0.642 2.375 -1.572 C31 7Q3 18 7Q3 C32 C19 C 0 1 N N N -8.073 2.690 -10.612 0.396 2.030 -3.042 C32 7Q3 19 7Q3 C33 C20 C 0 1 N N N -7.150 1.941 -9.653 -0.392 0.721 -3.134 C33 7Q3 20 7Q3 C36 C21 C 0 1 N N N -5.255 3.216 -13.266 3.239 2.068 -0.526 C36 7Q3 21 7Q3 C38 C22 C 0 1 N N N -3.308 2.092 -12.342 3.984 0.526 1.271 C38 7Q3 22 7Q3 C39 C23 C 0 1 N N N -1.920 2.260 -11.733 4.986 -0.573 1.628 C39 7Q3 23 7Q3 C40 C24 C 0 1 N N N -1.810 1.457 -10.438 4.704 -1.080 3.044 C40 7Q3 24 7Q3 C41 C25 C 0 1 N N N -0.926 0.232 -10.661 5.706 -2.179 3.401 C41 7Q3 25 7Q3 N02 N1 N 0 1 N N N -2.984 3.588 -14.265 4.179 -0.094 -1.103 N02 7Q3 26 7Q3 N06 N2 N 0 1 N N N -1.742 6.587 -16.045 2.371 -3.301 -1.012 N06 7Q3 27 7Q3 N10 N3 N 0 1 N N N -2.523 9.031 -16.527 -1.181 -3.780 -1.747 N10 7Q3 28 7Q3 N14 N4 N 0 1 N N N -4.774 7.494 -17.907 -3.879 -1.819 -0.140 N14 7Q3 29 7Q3 N18 N5 N 0 1 N N N -3.465 4.309 -19.564 -5.836 -0.221 1.229 N18 7Q3 30 7Q3 N20 N6 N 0 1 N N N -1.381 5.276 -18.929 -7.187 -1.804 2.387 N20 7Q3 31 7Q3 N21 N7 N 0 1 N N N -1.279 3.716 -20.646 -4.879 -1.811 2.621 N21 7Q3 32 7Q3 N26 N8 N 0 1 N N N -8.519 4.098 -15.714 -0.603 4.295 0.391 N26 7Q3 33 7Q3 N34 N9 N 0 1 N N N -7.646 2.071 -8.294 -0.628 0.390 -4.545 N34 7Q3 34 7Q3 N35 N10 N 0 1 N N N -6.114 4.379 -13.199 2.819 2.960 0.412 N35 7Q3 35 7Q3 N42 N11 N 0 1 N N N -0.545 -0.319 -9.373 5.435 -2.666 4.761 N42 7Q3 36 7Q3 O04 O1 O 0 1 N N N -2.488 5.748 -13.625 3.101 -1.242 0.494 O04 7Q3 37 7Q3 O08 O2 O 0 1 N N N 0.284 7.389 -15.301 1.071 -2.729 -2.739 O08 7Q3 38 7Q3 O12 O3 O 0 1 N N N -2.274 9.076 -18.807 -1.528 -2.907 0.288 O12 7Q3 39 7Q3 O16 O4 O 0 1 N N N -3.489 6.935 -19.710 -3.437 0.108 -1.182 O16 7Q3 40 7Q3 O28 O5 O 0 1 N N N -8.138 6.088 -14.636 0.666 3.291 1.943 O28 7Q3 41 7Q3 O37 O6 O 0 1 N N N -5.723 2.140 -13.445 2.793 2.106 -1.653 O37 7Q3 42 7Q3 H131 H1 H 0 0 N N N -4.808 9.222 -19.140 -3.124 -1.844 -2.108 H131 7Q3 43 7Q3 H132 H2 H 0 0 N N N -5.094 9.529 -17.393 -3.914 -3.354 -1.585 H132 7Q3 44 7Q3 H171 H3 H 0 0 N N N -4.053 4.766 -17.591 -3.874 0.263 1.790 H171 7Q3 45 7Q3 H222 H4 H 0 0 N N N -6.161 5.211 -19.721 -4.351 1.904 -0.548 H222 7Q3 46 7Q3 H221 H5 H 0 0 N N N -5.761 3.540 -19.196 -5.701 2.099 0.596 H221 7Q3 47 7Q3 H241 H6 H 0 0 N N N -8.359 5.090 -18.934 -2.594 3.076 -0.369 H241 7Q3 48 7Q3 H242 H7 H 0 0 N N N -8.148 3.400 -18.366 -3.565 4.455 0.199 H242 7Q3 49 7Q3 H011 H8 H 0 0 N N N -3.588 4.221 -12.375 5.262 1.474 -0.184 H011 7Q3 50 7Q3 H052 H9 H 0 0 N N N -1.810 4.539 -16.498 3.135 -2.070 -2.544 H052 7Q3 51 7Q3 H051 H10 H 0 0 N N N -0.449 5.048 -15.442 4.365 -2.936 -1.589 H051 7Q3 52 7Q3 H091 H11 H 0 0 N N N -0.533 9.356 -17.145 0.283 -5.298 -1.609 H091 7Q3 53 7Q3 H092 H12 H 0 0 N N N -0.882 9.784 -15.436 0.101 -4.293 -0.148 H092 7Q3 54 7Q3 H231 H13 H 0 0 N N N -6.315 4.088 -16.875 -4.407 3.252 2.055 H231 7Q3 55 7Q3 H232 H14 H 0 0 N N N -6.573 5.812 -17.307 -3.112 2.035 1.969 H232 7Q3 56 7Q3 H252 H15 H 0 0 N N N -9.107 5.816 -16.753 -1.999 5.085 1.768 H252 7Q3 57 7Q3 H251 H16 H 0 0 N N N -10.022 4.323 -17.152 -1.493 3.405 2.089 H251 7Q3 58 7Q3 H1 H17 H 0 1 N N N -7.771 3.150 -13.433 2.220 4.954 0.074 H1 7Q3 59 7Q3 H302 H18 H 0 0 N N N -8.158 5.814 -12.016 0.814 4.504 -1.849 H302 7Q3 60 7Q3 H301 H19 H 0 0 N N N -9.292 4.423 -12.084 2.333 3.607 -2.084 H301 7Q3 61 7Q3 H311 H20 H 0 0 N N N -6.477 4.103 -10.959 1.212 1.574 -1.101 H311 7Q3 62 7Q3 H312 H21 H 0 0 N N N -7.818 4.727 -9.940 -0.314 2.489 -1.060 H312 7Q3 63 7Q3 H322 H22 H 0 0 N N N -9.088 2.722 -10.189 -0.175 2.831 -3.512 H322 7Q3 64 7Q3 H321 H23 H 0 0 N N N -8.095 2.167 -11.579 1.351 1.916 -3.553 H321 7Q3 65 7Q3 H331 H24 H 0 0 N N N -7.120 0.877 -9.931 0.179 -0.079 -2.663 H331 7Q3 66 7Q3 H332 H25 H 0 0 N N N -6.137 2.365 -9.715 -1.347 0.836 -2.622 H332 7Q3 67 7Q3 H382 H26 H 0 0 N N N -4.027 1.861 -11.542 4.081 1.350 1.977 H382 7Q3 68 7Q3 H381 H27 H 0 0 N N N -3.286 1.264 -13.066 2.972 0.125 1.318 H381 7Q3 69 7Q3 H392 H28 H 0 0 N N N -1.164 1.902 -12.448 4.889 -1.397 0.921 H392 7Q3 70 7Q3 H391 H29 H 0 0 N N N -1.745 3.324 -11.516 5.998 -0.172 1.581 H391 7Q3 71 7Q3 H401 H30 H 0 0 N N N -1.367 2.088 -9.653 4.801 -0.256 3.751 H401 7Q3 72 7Q3 H402 H31 H 0 0 N N N -2.813 1.131 -10.124 3.692 -1.481 3.091 H402 7Q3 73 7Q3 H411 H32 H 0 0 N N N -1.482 -0.524 -11.235 5.609 -3.003 2.695 H411 7Q3 74 7Q3 H412 H33 H 0 0 N N N -0.024 0.525 -11.218 6.718 -1.778 3.354 H412 7Q3 75 7Q3 H021 H34 H 0 0 N N N -2.888 2.869 -14.953 4.544 -0.042 -2.000 H021 7Q3 76 7Q3 H061 H35 H 0 0 N N N -2.611 6.831 -16.477 2.502 -3.808 -0.195 H061 7Q3 77 7Q3 H101 H36 H 0 0 N N N -3.172 9.002 -15.766 -1.475 -3.932 -2.659 H101 7Q3 78 7Q3 H141 H37 H 0 0 N N N -5.352 7.180 -17.153 -4.247 -2.293 0.623 H141 7Q3 79 7Q3 H181 H38 H 0 0 N N N -3.898 3.651 -20.180 -6.632 0.168 0.833 H181 7Q3 80 7Q3 H2 H39 H 0 1 N N N -1.863 5.818 -18.241 -7.982 -1.415 1.991 H2 7Q3 81 7Q3 H201 H40 H 0 0 N N N -0.390 5.365 -19.032 -7.266 -2.557 2.994 H201 7Q3 82 7Q3 H211 H41 H 0 0 N N N -0.300 3.917 -20.621 -4.958 -2.564 3.227 H211 7Q3 83 7Q3 H261 H42 H 0 0 N N N -8.471 3.101 -15.659 -0.693 4.717 -0.477 H261 7Q3 84 7Q3 H341 H43 H 0 0 N N N -7.040 1.580 -7.669 -1.147 -0.471 -4.632 H341 7Q3 85 7Q3 H342 H44 H 0 0 N N N -7.673 3.038 -8.040 -1.099 1.146 -5.020 H342 7Q3 86 7Q3 H351 H46 H 0 0 N N N -5.720 5.287 -13.056 3.164 2.948 1.319 H351 7Q3 87 7Q3 H421 H47 H 0 0 N N N 0.034 -1.122 -9.512 4.482 -2.984 4.848 H421 7Q3 88 7Q3 H4 H48 H 0 1 N N N -0.041 0.370 -8.852 6.084 -3.393 5.021 H4 7Q3 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7Q3 N21 C19 DOUB N N 1 7Q3 O16 C15 DOUB N N 2 7Q3 C19 N18 SING N N 3 7Q3 C19 N20 SING N N 4 7Q3 N18 C17 SING N N 5 7Q3 C22 C17 SING N N 6 7Q3 C22 C23 SING N N 7 7Q3 C15 C17 SING N N 8 7Q3 C15 N14 SING N N 9 7Q3 O12 C11 DOUB N N 10 7Q3 C13 N14 SING N N 11 7Q3 C13 C11 SING N N 12 7Q3 C24 C23 SING N N 13 7Q3 C24 C25 SING N N 14 7Q3 C11 N10 SING N N 15 7Q3 C25 N26 SING N N 16 7Q3 N10 C09 SING N N 17 7Q3 C09 C07 SING N N 18 7Q3 N06 C07 SING N N 19 7Q3 N06 C05 SING N N 20 7Q3 C07 O08 DOUB N N 21 7Q3 N26 C27 SING N N 22 7Q3 C05 C03 SING N N 23 7Q3 O28 C27 DOUB N N 24 7Q3 C27 C29 SING N N 25 7Q3 C03 N02 SING N N 26 7Q3 C03 O04 DOUB N N 27 7Q3 N02 C01 SING N N 28 7Q3 O37 C36 DOUB N N 29 7Q3 C29 N35 SING N N 30 7Q3 C29 C30 SING N N 31 7Q3 C36 N35 SING N N 32 7Q3 C36 C01 SING N N 33 7Q3 C01 C38 SING N N 34 7Q3 C38 C39 SING N N 35 7Q3 C30 C31 SING N N 36 7Q3 C39 C40 SING N N 37 7Q3 C31 C32 SING N N 38 7Q3 C41 C40 SING N N 39 7Q3 C41 N42 SING N N 40 7Q3 C32 C33 SING N N 41 7Q3 C33 N34 SING N N 42 7Q3 C13 H131 SING N N 43 7Q3 C13 H132 SING N N 44 7Q3 C17 H171 SING N N 45 7Q3 C22 H222 SING N N 46 7Q3 C22 H221 SING N N 47 7Q3 C24 H241 SING N N 48 7Q3 C24 H242 SING N N 49 7Q3 C01 H011 SING N N 50 7Q3 C05 H052 SING N N 51 7Q3 C05 H051 SING N N 52 7Q3 C09 H091 SING N N 53 7Q3 C09 H092 SING N N 54 7Q3 C23 H231 SING N N 55 7Q3 C23 H232 SING N N 56 7Q3 C25 H252 SING N N 57 7Q3 C25 H251 SING N N 58 7Q3 C29 H1 SING N N 59 7Q3 C30 H302 SING N N 60 7Q3 C30 H301 SING N N 61 7Q3 C31 H311 SING N N 62 7Q3 C31 H312 SING N N 63 7Q3 C32 H322 SING N N 64 7Q3 C32 H321 SING N N 65 7Q3 C33 H331 SING N N 66 7Q3 C33 H332 SING N N 67 7Q3 C38 H382 SING N N 68 7Q3 C38 H381 SING N N 69 7Q3 C39 H392 SING N N 70 7Q3 C39 H391 SING N N 71 7Q3 C40 H401 SING N N 72 7Q3 C40 H402 SING N N 73 7Q3 C41 H411 SING N N 74 7Q3 C41 H412 SING N N 75 7Q3 N02 H021 SING N N 76 7Q3 N06 H061 SING N N 77 7Q3 N10 H101 SING N N 78 7Q3 N14 H141 SING N N 79 7Q3 N18 H181 SING N N 80 7Q3 N20 H2 SING N N 81 7Q3 N20 H201 SING N N 82 7Q3 N21 H211 SING N N 83 7Q3 N26 H261 SING N N 84 7Q3 N34 H341 SING N N 85 7Q3 N34 H342 SING N N 86 7Q3 N35 H351 SING N N 87 7Q3 N42 H421 SING N N 88 7Q3 N42 H4 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7Q3 InChI InChI 1.03 "InChI=1S/C25H47N11O6/c26-10-4-1-7-16-22(40)30-12-6-3-9-17(36-25(28)29)23(41)33-14-20(38)31-13-19(37)32-15-21(39)34-18(24(42)35-16)8-2-5-11-27/h16-18H,1-15,26-27H2,(H,30,40)(H,31,38)(H,32,37)(H,33,41)(H,34,39)(H,35,42)(H4,28,29,36)/t16-,17+,18+/m0/s1" 7Q3 InChIKey InChI 1.03 WWPJZTJFBPQVSG-RCCFBDPRSA-N 7Q3 SMILES_CANONICAL CACTVS 3.385 "NCCCC[C@@H]1NC(=O)[C@@H](CCCCN)NC(=O)CNC(=O)CNC(=O)CNC(=O)[C@@H](CCCCNC1=O)NC(N)=N" 7Q3 SMILES CACTVS 3.385 "NCCCC[CH]1NC(=O)[CH](CCCCN)NC(=O)CNC(=O)CNC(=O)CNC(=O)[CH](CCCCNC1=O)NC(N)=N" 7Q3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\N[C@@H]1CCCCNC(=O)[C@@H](NC(=O)[C@H](NC(=O)CNC(=O)CNC(=O)CNC1=O)CCCCN)CCCCN" 7Q3 SMILES "OpenEye OEToolkits" 2.0.7 "C1CCNC(=O)C(NC(=O)C(NC(=O)CNC(=O)CNC(=O)CNC(=O)C(C1)NC(=N)N)CCCCN)CCCCN" # _pdbx_chem_comp_identifier.comp_id 7Q3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[(3~{S},6~{R},18~{R})-3,6-bis(4-azanylbutyl)-2,5,8,11,14,17-hexakis(oxidanylidene)-1,4,7,10,13,16-hexazacyclodocos-18-yl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7Q3 "Create component" 2021-10-12 PDBJ 7Q3 "Initial release" 2022-08-10 RCSB #