data_7QJ # _chem_comp.id 7QJ _chem_comp.name "3-[4-[2,3-dihydro-1H-inden-4-yl(methyl)amino]-6-(trifluoromethyl)pyrimidin-2-yl]oxypropanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H18 F3 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-07-12 _chem_comp.pdbx_modified_date 2024-02-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 381.349 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8PP0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7QJ C9 C1 C 0 1 Y N N N N N 18.234 2.083 22.568 -2.998 -1.034 -0.670 C9 7QJ 1 7QJ C8 C2 C 0 1 N N N N N N 19.569 9.430 25.935 6.513 -0.695 0.256 C8 7QJ 2 7QJ C7 C3 C 0 1 N N N N N N 19.533 8.241 26.841 5.282 -1.550 0.102 C7 7QJ 3 7QJ C10 C4 C 0 1 Y N N N N N 18.724 0.793 22.846 -3.765 -0.688 0.438 C10 7QJ 4 7QJ C5 C5 C 0 1 Y N N N N N 18.887 4.725 26.479 1.684 -0.822 -0.164 C5 7QJ 5 7QJ C6 C6 C 0 1 N N N N N N 19.800 6.944 26.123 4.043 -0.654 0.047 C6 7QJ 6 7QJ N1 N1 N 0 1 Y N N N N N 18.256 3.957 27.348 1.660 0.498 -0.092 N1 7QJ 7 7QJ C2 C7 C 0 1 Y N N N N N 17.729 2.544 25.443 -0.666 0.462 -0.292 C2 7QJ 8 7QJ C3 C8 C 0 1 Y N N N N N 17.673 2.891 26.796 0.515 1.163 -0.152 C3 7QJ 9 7QJ C4 C9 C 0 1 N N N N N N 16.946 2.014 27.774 0.502 2.668 -0.067 C4 7QJ 10 7QJ O2 O1 O 0 1 N N N N N N 20.490 9.670 25.199 6.410 0.508 0.315 O2 7QJ 11 7QJ O1 O2 O 0 1 N N N N N N 18.503 10.179 26.033 7.724 -1.269 0.327 O1 7QJ 12 7QJ O O3 O 0 1 N N N N N N 19.175 5.944 26.925 2.875 -1.465 -0.099 O 7QJ 13 7QJ F2 F1 F 0 1 N N N N N N 16.444 0.919 27.187 -0.584 3.167 -0.794 F2 7QJ 14 7QJ F1 F2 F 0 1 N N N N N N 15.930 2.649 28.373 0.387 3.059 1.271 F1 7QJ 15 7QJ F F3 F 0 1 N N N N N N 17.742 1.622 28.756 1.692 3.175 -0.600 F 7QJ 16 7QJ N2 N2 N 0 1 Y N N N N N 19.093 4.509 25.194 0.575 -1.532 -0.294 N2 7QJ 17 7QJ C1 C10 C 0 1 Y N N N N N 18.514 3.421 24.677 -0.609 -0.931 -0.361 C1 7QJ 18 7QJ N N3 N 0 1 N N N N N N 18.752 3.208 23.300 -1.769 -1.678 -0.496 N 7QJ 19 7QJ C C11 C 0 1 N N N N N N 19.158 4.357 22.483 -1.708 -3.141 -0.456 C 7QJ 20 7QJ C17 C12 C 0 1 Y N N N N N 17.362 2.301 21.494 -3.454 -0.746 -1.948 C17 7QJ 21 7QJ C16 C13 C 0 1 Y N N N N N 17.031 1.246 20.664 -4.671 -0.115 -2.118 C16 7QJ 22 7QJ C15 C14 C 0 1 Y N N N N N 17.551 -0.014 20.900 -5.431 0.228 -1.016 C15 7QJ 23 7QJ C14 C15 C 0 1 Y N N N N N 18.373 -0.244 21.994 -4.978 -0.052 0.263 C14 7QJ 24 7QJ C13 C16 C 0 1 N N N N N N 18.948 -1.543 22.494 -5.614 0.218 1.610 C13 7QJ 25 7QJ C12 C17 C 0 1 N N N N N N 19.361 -1.226 23.928 -4.863 -0.696 2.601 C12 7QJ 26 7QJ C11 C18 C 0 1 N N N N N N 19.562 0.282 23.994 -3.502 -0.892 1.915 C11 7QJ 27 7QJ H1 H1 H 0 1 N N N N N N 20.296 8.373 27.622 5.354 -2.128 -0.819 H1 7QJ 28 7QJ H2 H2 H 0 1 N N N N N N 18.538 8.185 27.306 5.202 -2.228 0.952 H2 7QJ 29 7QJ H3 H3 H 0 1 N N N N N N 19.360 6.962 25.115 3.971 -0.076 0.968 H3 7QJ 30 7QJ H4 H4 H 0 1 N N N N N N 20.882 6.759 26.048 4.122 0.024 -0.803 H4 7QJ 31 7QJ H5 H5 H 0 1 N N N N N N 17.219 1.687 25.028 -1.613 0.980 -0.343 H5 7QJ 32 7QJ H6 H6 H 0 1 N N N N N N 18.580 10.919 25.443 8.485 -0.679 0.425 H6 7QJ 33 7QJ H7 H7 H 0 1 N N N N N N 19.537 5.157 23.136 -1.560 -3.526 -1.465 H7 7QJ 34 7QJ H8 H8 H 0 1 N N N N N N 19.950 4.049 21.785 -0.878 -3.453 0.177 H8 7QJ 35 7QJ H9 H9 H 0 1 N N N N N N 18.292 4.727 21.915 -2.641 -3.533 -0.051 H9 7QJ 36 7QJ H10 H10 H 0 1 N N N N N N 16.952 3.284 21.316 -2.859 -1.013 -2.809 H10 7QJ 37 7QJ H11 H11 H 0 1 N N N N N N 16.365 1.406 19.829 -5.031 0.107 -3.112 H11 7QJ 38 7QJ H12 H12 H 0 1 N N N N N N 17.315 -0.825 20.227 -6.383 0.721 -1.153 H12 7QJ 39 7QJ H13 H13 H 0 1 N N N N N N 18.192 -2.342 22.471 -5.484 1.264 1.886 H13 7QJ 40 7QJ H14 H14 H 0 1 N N N N N N 19.818 -1.844 21.892 -6.673 -0.039 1.586 H14 7QJ 41 7QJ H15 H15 H 0 1 N N N N N N 18.571 -1.536 24.629 -4.753 -0.208 3.570 H15 7QJ 42 7QJ H16 H16 H 0 1 N N N N N N 20.298 -1.746 24.178 -5.371 -1.655 2.705 H16 7QJ 43 7QJ H17 H17 H 0 1 N N N N N N 20.621 0.545 23.857 -3.120 -1.897 2.096 H17 7QJ 44 7QJ H18 H18 H 0 1 N N N N N N 19.205 0.686 24.953 -2.796 -0.147 2.280 H18 7QJ 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7QJ C16 C15 DOUB Y N 1 7QJ C16 C17 SING Y N 2 7QJ C15 C14 SING Y N 3 7QJ C17 C9 DOUB Y N 4 7QJ C14 C13 SING N N 5 7QJ C14 C10 DOUB Y N 6 7QJ C N SING N N 7 7QJ C13 C12 SING N N 8 7QJ C9 C10 SING Y N 9 7QJ C9 N SING N N 10 7QJ C10 C11 SING N N 11 7QJ N C1 SING N N 12 7QJ C12 C11 SING N N 13 7QJ C1 N2 DOUB Y N 14 7QJ C1 C2 SING Y N 15 7QJ N2 C5 SING Y N 16 7QJ O2 C8 DOUB N N 17 7QJ C2 C3 DOUB Y N 18 7QJ C8 O1 SING N N 19 7QJ C8 C7 SING N N 20 7QJ C6 C7 SING N N 21 7QJ C6 O SING N N 22 7QJ C5 O SING N N 23 7QJ C5 N1 DOUB Y N 24 7QJ C3 N1 SING Y N 25 7QJ C3 C4 SING N N 26 7QJ F2 C4 SING N N 27 7QJ C4 F1 SING N N 28 7QJ C4 F SING N N 29 7QJ C7 H1 SING N N 30 7QJ C7 H2 SING N N 31 7QJ C6 H3 SING N N 32 7QJ C6 H4 SING N N 33 7QJ C2 H5 SING N N 34 7QJ O1 H6 SING N N 35 7QJ C H7 SING N N 36 7QJ C H8 SING N N 37 7QJ C H9 SING N N 38 7QJ C17 H10 SING N N 39 7QJ C16 H11 SING N N 40 7QJ C15 H12 SING N N 41 7QJ C13 H13 SING N N 42 7QJ C13 H14 SING N N 43 7QJ C12 H15 SING N N 44 7QJ C12 H16 SING N N 45 7QJ C11 H17 SING N N 46 7QJ C11 H18 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7QJ InChI InChI 1.06 "InChI=1S/C18H18F3N3O3/c1-24(13-7-3-5-11-4-2-6-12(11)13)15-10-14(18(19,20)21)22-17(23-15)27-9-8-16(25)26/h3,5,7,10H,2,4,6,8-9H2,1H3,(H,25,26)" 7QJ InChIKey InChI 1.06 YMSJOQCCWIPKGF-UHFFFAOYSA-N 7QJ SMILES_CANONICAL CACTVS 3.385 "CN(c1cc(nc(OCCC(O)=O)n1)C(F)(F)F)c2cccc3CCCc23" 7QJ SMILES CACTVS 3.385 "CN(c1cc(nc(OCCC(O)=O)n1)C(F)(F)F)c2cccc3CCCc23" 7QJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(c1cccc2c1CCC2)c3cc(nc(n3)OCCC(=O)O)C(F)(F)F" 7QJ SMILES "OpenEye OEToolkits" 2.0.7 "CN(c1cccc2c1CCC2)c3cc(nc(n3)OCCC(=O)O)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id 7QJ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[4-[2,3-dihydro-1~{H}-inden-4-yl(methyl)amino]-6-(trifluoromethyl)pyrimidin-2-yl]oxypropanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7QJ "Create component" 2023-07-12 PDBE 7QJ "Initial release" 2024-02-07 RCSB #