data_7QO # _chem_comp.id 7QO _chem_comp.name "(2~{S},3~{S},4~{S},5~{R},6~{R})-6-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4,5-tris(oxidanyl)oxane-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N3 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-14 _chem_comp.pdbx_modified_date 2022-04-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 287.226 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7QO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7VOC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7QO C01 C1 C 0 1 N N S -0.412 20.210 -64.915 2.032 0.656 0.559 C01 7QO 1 7QO C02 C2 C 0 1 N N S 0.250 21.315 -65.758 2.555 -0.513 -0.280 C02 7QO 2 7QO C03 C3 C 0 1 N N S 1.722 21.538 -65.371 1.780 -1.782 0.088 C03 7QO 3 7QO C04 C4 C 0 1 N N R 2.500 20.226 -65.226 0.284 -1.535 -0.127 C04 7QO 4 7QO C05 C5 C 0 1 N N R 1.691 19.206 -64.411 -0.151 -0.326 0.706 C05 7QO 5 7QO C11 C6 C 0 1 N N N 3.191 17.459 -63.627 -1.972 0.343 -0.762 C11 7QO 6 7QO C13 C7 C 0 1 N N N 3.447 15.437 -64.739 -4.168 0.485 -0.057 C13 7QO 7 7QO C14 C8 C 0 1 N N N 2.562 15.857 -65.679 -3.778 0.072 1.233 C14 7QO 8 7QO C15 C9 C 0 1 N N N 2.000 17.094 -65.571 -2.471 -0.187 1.472 C15 7QO 9 7QO C18 C10 C 0 1 N N N -1.780 19.812 -65.501 2.749 1.921 0.160 C18 7QO 10 7QO N10 N1 N 0 1 N N N 2.314 17.895 -64.558 -1.568 -0.048 0.461 N10 7QO 11 7QO N12 N2 N 0 1 N N N 3.751 16.233 -63.734 -3.253 0.607 -1.011 N12 7QO 12 7QO N16 N3 N 0 1 N N N 4.080 14.134 -64.809 -5.489 0.760 -0.326 N16 7QO 13 7QO O06 O1 O 0 1 N N N 0.378 19.046 -64.891 0.629 0.812 0.335 O06 7QO 14 7QO O07 O2 O 0 1 N N N -0.403 22.532 -65.547 3.945 -0.708 -0.014 O07 7QO 15 7QO O08 O3 O 0 1 N N N 3.707 20.533 -64.580 -0.454 -2.687 0.282 O08 7QO 16 7QO O09 O4 O 0 1 N N N 2.355 22.354 -66.329 2.210 -2.862 -0.742 O09 7QO 17 7QO O17 O5 O 0 1 N N N 3.477 18.143 -62.709 -1.150 0.462 -1.655 O17 7QO 18 7QO O19 O6 O 0 1 N N N -2.596 20.679 -65.876 2.135 2.826 -0.355 O19 7QO 19 7QO O20 O7 O 0 1 N N N -2.123 18.610 -65.626 4.068 2.042 0.378 O20 7QO 20 7QO H1 H1 H 0 1 N N N -0.565 20.591 -63.895 2.211 0.454 1.615 H1 7QO 21 7QO H2 H2 H 0 1 N N N 0.203 21.027 -66.818 2.413 -0.293 -1.339 H2 7QO 22 7QO H3 H3 H 0 1 N N N 1.737 22.045 -64.395 1.962 -2.029 1.134 H3 7QO 23 7QO H4 H4 H 0 1 N N N 2.689 19.811 -66.227 0.096 -1.337 -1.183 H4 7QO 24 7QO H5 H5 H 0 1 N N N 1.689 19.509 -63.354 -0.000 -0.541 1.764 H5 7QO 25 7QO H6 H6 H 0 1 N N N 2.305 15.214 -66.508 -4.510 -0.031 2.020 H6 7QO 26 7QO H7 H7 H 0 1 N N N 1.292 17.427 -66.316 -2.148 -0.504 2.453 H7 7QO 27 7QO H8 H8 H 0 1 N N N 4.732 13.856 -64.103 -5.754 1.043 -1.215 H8 7QO 28 7QO H9 H9 H 0 1 N N N 3.864 13.513 -65.563 -6.155 0.670 0.373 H9 7QO 29 7QO H10 H10 H 0 1 N N N -1.343 22.396 -65.573 4.497 0.058 -0.225 H10 7QO 30 7QO H11 H11 H 0 1 N N N 4.219 19.740 -64.472 -0.226 -3.493 -0.202 H11 7QO 31 7QO H12 H12 H 0 1 N N N 3.263 22.487 -66.083 3.151 -3.070 -0.661 H12 7QO 32 7QO H13 H13 H 0 1 N N N -2.993 18.566 -66.006 4.483 2.872 0.105 H13 7QO 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7QO O09 C03 SING N N 1 7QO O19 C18 DOUB N N 2 7QO C02 O07 SING N N 3 7QO C02 C03 SING N N 4 7QO C02 C01 SING N N 5 7QO C14 C15 DOUB N N 6 7QO C14 C13 SING N N 7 7QO O20 C18 SING N N 8 7QO C15 N10 SING N N 9 7QO C18 C01 SING N N 10 7QO C03 C04 SING N N 11 7QO C04 O08 SING N N 12 7QO C04 C05 SING N N 13 7QO C01 O06 SING N N 14 7QO O06 C05 SING N N 15 7QO N16 C13 SING N N 16 7QO C13 N12 DOUB N N 17 7QO N10 C05 SING N N 18 7QO N10 C11 SING N N 19 7QO N12 C11 SING N N 20 7QO C11 O17 DOUB N N 21 7QO C01 H1 SING N N 22 7QO C02 H2 SING N N 23 7QO C03 H3 SING N N 24 7QO C04 H4 SING N N 25 7QO C05 H5 SING N N 26 7QO C14 H6 SING N N 27 7QO C15 H7 SING N N 28 7QO N16 H8 SING N N 29 7QO N16 H9 SING N N 30 7QO O07 H10 SING N N 31 7QO O08 H11 SING N N 32 7QO O09 H12 SING N N 33 7QO O20 H13 SING N N 34 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7QO InChI InChI 1.03 "InChI=1S/C10H13N3O7/c11-3-1-2-13(10(19)12-3)8-6(16)4(14)5(15)7(20-8)9(17)18/h1-2,4-8,14-16H,(H,17,18)(H2,11,12,19)/t4-,5-,6+,7-,8+/m0/s1" 7QO InChIKey InChI 1.03 CHKIQPXDGYGCHW-YOWKYNACSA-N 7QO SMILES_CANONICAL CACTVS 3.385 "NC1=NC(=O)N(C=C1)[C@@H]2O[C@@H]([C@@H](O)[C@H](O)[C@H]2O)C(O)=O" 7QO SMILES CACTVS 3.385 "NC1=NC(=O)N(C=C1)[CH]2O[CH]([CH](O)[CH](O)[CH]2O)C(O)=O" 7QO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)C(=O)O)O)O)O" 7QO SMILES "OpenEye OEToolkits" 2.0.7 "C1=CN(C(=O)N=C1N)C2C(C(C(C(O2)C(=O)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id 7QO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{S},5~{R},6~{R})-6-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4,5-tris(oxidanyl)oxane-2-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7QO "Create component" 2021-10-14 PDBJ 7QO "Initial release" 2022-05-04 RCSB ##