data_7RF # _chem_comp.id 7RF _chem_comp.name "(6-carbamimidoylnaphthalen-2-yl) 4-carbamimidamidobenzoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H17 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-14 _chem_comp.pdbx_modified_date 2022-11-18 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 347.371 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7RF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7VM7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7RF C4 C1 C 0 1 Y N N -23.645 -11.645 -6.978 4.777 0.255 0.979 C4 7RF 1 7RF C3 C2 C 0 1 Y N N -24.568 -12.642 -6.728 3.424 0.052 1.121 C3 7RF 2 7RF C2 C3 C 0 1 Y N N -24.747 -13.119 -5.452 2.594 0.070 -0.005 C2 7RF 3 7RF O2 O1 O 0 1 N N N -26.687 -13.640 -4.314 0.346 -0.129 -0.943 O2 7RF 4 7RF C1 C4 C 0 1 N N N -25.696 -14.101 -5.209 1.144 -0.147 0.143 C1 7RF 5 7RF O1 O2 O 0 1 N N N -25.593 -15.214 -5.776 0.667 -0.341 1.243 O1 7RF 6 7RF C14 C5 C 0 1 Y N N -28.455 -15.155 -4.459 -1.783 0.781 -0.464 C14 7RF 7 7RF C13 C6 C 0 1 Y N N -29.369 -16.030 -3.909 -3.158 0.595 -0.248 C13 7RF 8 7RF C18 C7 C 0 1 Y N N -30.229 -16.623 -4.780 -4.001 1.687 0.030 C18 7RF 9 7RF C17 C8 C 0 1 Y N N -31.174 -17.505 -4.341 -5.328 1.485 0.235 C17 7RF 10 7RF C16 C9 C 0 1 Y N N -31.314 -17.844 -3.007 -5.878 0.193 0.174 C16 7RF 11 7RF C19 C10 C 0 1 N N N -32.338 -18.806 -2.746 -7.327 0.001 0.402 C19 7RF 12 7RF N5 N1 N 0 1 N N N -32.860 -19.494 -3.778 -7.842 -1.195 0.347 N5 7RF 13 7RF N4 N2 N 0 1 N N N -32.780 -19.078 -1.531 -8.132 1.086 0.673 N4 7RF 14 7RF C15 C11 C 0 1 Y N N -30.448 -17.197 -2.088 -5.075 -0.901 -0.097 C15 7RF 15 7RF C12 C12 C 0 1 Y N N -29.455 -16.293 -2.550 -3.701 -0.713 -0.312 C12 7RF 16 7RF C11 C13 C 0 1 Y N N -28.532 -15.613 -1.724 -2.856 -1.803 -0.591 C11 7RF 17 7RF C10 C14 C 0 1 Y N N -27.592 -14.715 -2.279 -1.528 -1.594 -0.795 C10 7RF 18 7RF C9 C15 C 0 1 Y N N -27.552 -14.492 -3.672 -0.985 -0.307 -0.734 C9 7RF 19 7RF C7 C16 C 0 1 Y N N -23.976 -12.597 -4.415 3.144 0.295 -1.271 C7 7RF 20 7RF C6 C17 C 0 1 Y N N -23.039 -11.601 -4.669 4.499 0.497 -1.405 C6 7RF 21 7RF C5 C18 C 0 1 Y N N -22.852 -11.129 -5.963 5.321 0.478 -0.282 C5 7RF 22 7RF N1 N3 N 0 1 N N N -21.968 -10.147 -6.163 6.692 0.684 -0.421 N1 7RF 23 7RF C8 C19 C 0 1 N N N -21.259 -9.843 -7.278 7.579 -0.068 0.316 C8 7RF 24 7RF N3 N4 N 0 1 N N N -21.274 -10.587 -8.389 8.855 0.193 0.263 N3 7RF 25 7RF N2 N5 N 0 1 N N N -20.469 -8.755 -7.279 7.120 -1.093 1.109 N2 7RF 26 7RF H1 H1 H 0 1 N N N -23.539 -11.260 -7.982 5.418 0.245 1.849 H1 7RF 27 7RF H2 H2 H 0 1 N N N -25.152 -13.049 -7.540 3.002 -0.122 2.100 H2 7RF 28 7RF H3 H3 H 0 1 N N N -28.452 -14.991 -5.526 -1.356 1.772 -0.423 H3 7RF 29 7RF H4 H4 H 0 1 N N N -30.163 -16.393 -5.833 -3.593 2.686 0.079 H4 7RF 30 7RF H5 H5 H 0 1 N N N -31.838 -17.956 -5.063 -5.969 2.328 0.449 H5 7RF 31 7RF H6 H6 H 0 1 N N N -33.548 -20.154 -3.478 -8.792 -1.321 0.496 H6 7RF 32 7RF H7 H7 H 0 1 N N N -32.395 -18.601 -0.741 -7.748 1.976 0.714 H7 7RF 33 7RF H8 H8 H 0 1 N N N -33.499 -19.761 -1.402 -9.082 0.960 0.822 H8 7RF 34 7RF H9 H9 H 0 1 N N N -30.545 -17.393 -1.030 -5.502 -1.892 -0.142 H9 7RF 35 7RF H10 H10 H 0 1 N N N -28.545 -15.781 -0.657 -3.261 -2.803 -0.641 H10 7RF 36 7RF H11 H11 H 0 1 N N N -26.900 -14.196 -1.633 -0.884 -2.435 -1.009 H11 7RF 37 7RF H12 H12 H 0 1 N N N -24.107 -12.968 -3.409 2.507 0.309 -2.142 H12 7RF 38 7RF H13 H13 H 0 1 N N N -22.454 -11.193 -3.858 4.924 0.670 -2.382 H13 7RF 39 7RF H14 H14 H 0 1 N N N -21.806 -9.550 -5.377 7.021 1.356 -1.038 H14 7RF 40 7RF H15 H15 H 0 1 N N N -21.867 -11.387 -8.296 9.173 0.961 -0.236 H15 7RF 41 7RF H16 H16 H 0 1 N N N -20.409 -8.180 -6.463 6.170 -1.287 1.148 H16 7RF 42 7RF H17 H17 H 0 1 N N N -19.941 -8.521 -8.096 7.745 -1.622 1.628 H17 7RF 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7RF N3 C8 DOUB N N 1 7RF N2 C8 SING N N 2 7RF C8 N1 SING N N 3 7RF C4 C3 DOUB Y N 4 7RF C4 C5 SING Y N 5 7RF C3 C2 SING Y N 6 7RF N1 C5 SING N N 7 7RF C5 C6 DOUB Y N 8 7RF O1 C1 DOUB N N 9 7RF C2 C1 SING N N 10 7RF C2 C7 DOUB Y N 11 7RF C1 O2 SING N N 12 7RF C18 C17 DOUB Y N 13 7RF C18 C13 SING Y N 14 7RF C6 C7 SING Y N 15 7RF C14 C13 DOUB Y N 16 7RF C14 C9 SING Y N 17 7RF C17 C16 SING Y N 18 7RF O2 C9 SING N N 19 7RF C13 C12 SING Y N 20 7RF N5 C19 DOUB N N 21 7RF C9 C10 DOUB Y N 22 7RF C16 C19 SING N N 23 7RF C16 C15 DOUB Y N 24 7RF C19 N4 SING N N 25 7RF C12 C15 SING Y N 26 7RF C12 C11 DOUB Y N 27 7RF C10 C11 SING Y N 28 7RF C4 H1 SING N N 29 7RF C3 H2 SING N N 30 7RF C14 H3 SING N N 31 7RF C18 H4 SING N N 32 7RF C17 H5 SING N N 33 7RF N5 H6 SING N N 34 7RF N4 H7 SING N N 35 7RF N4 H8 SING N N 36 7RF C15 H9 SING N N 37 7RF C11 H10 SING N N 38 7RF C10 H11 SING N N 39 7RF C7 H12 SING N N 40 7RF C6 H13 SING N N 41 7RF N1 H14 SING N N 42 7RF N3 H15 SING N N 43 7RF N2 H16 SING N N 44 7RF N2 H17 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7RF InChI InChI 1.03 "InChI=1S/C19H17N5O2/c20-17(21)14-2-1-13-10-16(8-5-12(13)9-14)26-18(25)11-3-6-15(7-4-11)24-19(22)23/h1-10H,(H3,20,21)(H4,22,23,24)" 7RF InChIKey InChI 1.03 MQQNFDZXWVTQEH-UHFFFAOYSA-N 7RF SMILES_CANONICAL CACTVS 3.385 "NC(=N)Nc1ccc(cc1)C(=O)Oc2ccc3cc(ccc3c2)C(N)=N" 7RF SMILES CACTVS 3.385 "NC(=N)Nc1ccc(cc1)C(=O)Oc2ccc3cc(ccc3c2)C(N)=N" 7RF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\c1ccc2cc(ccc2c1)OC(=O)c3ccc(cc3)N/C(=N/[H])/N)/N" 7RF SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(=O)Oc2ccc3cc(ccc3c2)C(=N)N)NC(=N)N" # _pdbx_chem_comp_identifier.comp_id 7RF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(6-carbamimidoylnaphthalen-2-yl) 4-carbamimidamidobenzoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7RF "Create component" 2021-10-14 PDBJ 7RF "Initial release" 2022-11-23 RCSB #