data_7RP # _chem_comp.id 7RP _chem_comp.name "7-ALPHA-D-RIBOFURANOSYL-PURINE-5'-PHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N4 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2002-03-19 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 332.207 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7RP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1L5L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7RP C8 C8 C 0 1 Y N N 56.025 40.887 13.150 -1.192 0.611 1.426 C8 7RP 1 7RP N9 N9 N 0 1 Y N N 56.585 41.545 14.167 -1.800 1.146 2.448 N9 7RP 2 7RP C4 C4 C 0 1 Y N N 57.721 42.089 13.683 -1.349 0.591 3.589 C4 7RP 3 7RP C5 C5 C 0 1 Y N N 57.793 41.707 12.335 -0.385 -0.369 3.221 C5 7RP 4 7RP N7 N7 N 0 1 Y N N 56.700 40.936 11.998 -0.309 -0.324 1.845 N7 7RP 5 7RP N3 N3 N 0 1 Y N N 58.603 42.850 14.379 -1.620 0.759 4.883 N3 7RP 6 7RP C2 C2 C 0 1 Y N N 59.647 43.244 13.590 -0.994 0.045 5.793 C2 7RP 7 7RP N1 N1 N 0 1 Y N N 59.843 42.938 12.259 -0.083 -0.858 5.480 N1 7RP 8 7RP C6 C6 C 0 1 Y N N 58.946 42.172 11.584 0.248 -1.091 4.219 C6 7RP 9 7RP P P P 0 1 N N N 59.338 39.339 6.132 -0.568 -0.115 -4.540 P 7RP 10 7RP O1P O1P O 0 1 N N N 59.145 38.108 5.316 0.345 -1.204 -4.948 O1P 7RP 11 7RP O2P O2P O 0 1 N N N 59.556 40.529 5.259 -2.022 -0.364 -5.186 O2P 7RP 12 7RP O3P O3P O 0 1 N N N 60.510 39.184 7.040 0.013 1.294 -5.056 O3P 7RP 13 7RP "O5'" O5* O 0 1 N N N 58.065 39.599 7.072 -0.691 -0.090 -2.935 "O5'" 7RP 14 7RP "C5'" C5* C 0 1 N N N 57.600 38.608 7.969 0.623 0.133 -2.423 "C5'" 7RP 15 7RP "C4'" C4* C 0 1 N N R 57.909 39.081 9.370 0.576 0.168 -0.895 "C4'" 7RP 16 7RP "O4'" O4* O 0 1 N N N 57.267 40.371 9.611 0.108 -1.098 -0.376 "O4'" 7RP 17 7RP "C3'" C3* C 0 1 N N S 57.417 38.200 10.478 1.997 0.330 -0.309 "C3'" 7RP 18 7RP "O3'" O3* O 0 1 N N N 58.270 38.261 11.656 2.245 1.695 0.030 "O3'" 7RP 19 7RP "C2'" C2* C 0 1 N N R 56.048 38.761 10.720 1.986 -0.550 0.959 "C2'" 7RP 20 7RP "O2'" O2* O 0 1 N N N 55.627 38.220 11.971 2.231 0.244 2.122 "O2'" 7RP 21 7RP "C1'" C1* C 0 1 N N S 56.304 40.281 10.688 0.559 -1.140 0.994 "C1'" 7RP 22 7RP H8 H8 H 0 1 N N N 55.072 40.341 13.254 -1.368 0.877 0.394 H8 7RP 23 7RP H2 H2 H 0 1 N N N 60.410 43.873 14.077 -1.233 0.203 6.834 H2 7RP 24 7RP H6 H6 H 0 1 N N N 59.136 41.947 10.521 0.995 -1.832 3.974 H6 7RP 25 7RP HOP2 2HOP H 0 0 N N N 59.679 41.314 5.779 -1.903 -0.371 -6.146 HOP2 7RP 26 7RP HOP3 3HOP H 0 0 N N N 60.633 39.969 7.560 -0.610 1.976 -4.770 HOP3 7RP 27 7RP "H5'1" 1H5* H 0 0 N N N 56.523 38.359 7.821 1.002 1.084 -2.797 "H5'1" 7RP 28 7RP "H5'2" 2H5* H 0 0 N N N 58.014 37.596 7.751 1.281 -0.672 -2.749 "H5'2" 7RP 29 7RP "H4'" H4* H 0 1 N N N 59.023 39.101 9.396 -0.067 0.978 -0.554 "H4'" 7RP 30 7RP "H3'" H3* H 0 1 N N N 57.415 37.113 10.227 2.744 -0.028 -1.017 "H3'" 7RP 31 7RP "HO'3" 3HO* H 0 0 N N N 57.958 37.702 12.358 3.131 1.730 0.416 "HO'3" 7RP 32 7RP "H2'" H2* H 0 1 N N N 55.233 38.519 9.998 2.727 -1.345 0.879 "H2'" 7RP 33 7RP "HO'2" 2HO* H 0 0 N N N 54.759 38.575 12.124 3.109 0.633 2.014 "HO'2" 7RP 34 7RP "H1'" H1* H 0 1 N N N 55.379 40.879 10.517 0.583 -2.169 1.354 "H1'" 7RP 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7RP C8 N9 DOUB Y N 1 7RP C8 N7 SING Y N 2 7RP C8 H8 SING N N 3 7RP N9 C4 SING Y N 4 7RP C4 C5 DOUB Y N 5 7RP C4 N3 SING Y N 6 7RP C5 N7 SING Y N 7 7RP C5 C6 SING Y N 8 7RP N7 "C1'" SING N N 9 7RP N3 C2 DOUB Y N 10 7RP C2 N1 SING Y N 11 7RP C2 H2 SING N N 12 7RP N1 C6 DOUB Y N 13 7RP C6 H6 SING N N 14 7RP P O1P DOUB N N 15 7RP P O2P SING N N 16 7RP P O3P SING N N 17 7RP P "O5'" SING N N 18 7RP O2P HOP2 SING N N 19 7RP O3P HOP3 SING N N 20 7RP "O5'" "C5'" SING N N 21 7RP "C5'" "C4'" SING N N 22 7RP "C5'" "H5'1" SING N N 23 7RP "C5'" "H5'2" SING N N 24 7RP "C4'" "O4'" SING N N 25 7RP "C4'" "C3'" SING N N 26 7RP "C4'" "H4'" SING N N 27 7RP "O4'" "C1'" SING N N 28 7RP "C3'" "O3'" SING N N 29 7RP "C3'" "C2'" SING N N 30 7RP "C3'" "H3'" SING N N 31 7RP "O3'" "HO'3" SING N N 32 7RP "C2'" "O2'" SING N N 33 7RP "C2'" "C1'" SING N N 34 7RP "C2'" "H2'" SING N N 35 7RP "O2'" "HO'2" SING N N 36 7RP "C1'" "H1'" SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7RP SMILES ACDLabs 10.04 "O=P(O)(O)OCC3OC(n2cnc1ncncc12)C(O)C3O" 7RP SMILES_CANONICAL CACTVS 3.341 "O[C@H]1[C@@H](O)[C@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3ncncc23" 7RP SMILES CACTVS 3.341 "O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)n2cnc3ncncc23" 7RP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1c2c(ncn1)ncn2[C@@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O" 7RP SMILES "OpenEye OEToolkits" 1.5.0 "c1c2c(ncn1)ncn2C3C(C(C(O3)COP(=O)(O)O)O)O" 7RP InChI InChI 1.03 "InChI=1S/C10H13N4O7P/c15-7-6(2-20-22(17,18)19)21-10(8(7)16)14-4-13-9-5(14)1-11-3-12-9/h1,3-4,6-8,10,15-16H,2H2,(H2,17,18,19)/t6-,7-,8-,10+/m1/s1" 7RP InChIKey InChI 1.03 NICKPTPNIMHUHB-DQUBFYRCSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7RP "SYSTEMATIC NAME" ACDLabs 10.04 "7-(5-O-phosphono-alpha-D-ribofuranosyl)-7H-purine" 7RP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5S)-3,4-dihydroxy-5-purin-7-yl-oxolan-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7RP "Create component" 2002-03-19 RCSB 7RP "Modify descriptor" 2011-06-04 RCSB #