data_7VI # _chem_comp.id 7VI _chem_comp.name "N-[(benzyloxy)carbonyl]-L-valyl-3-cyclopropyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H38 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-08-23 _chem_comp.pdbx_modified_date 2022-07-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 502.603 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7VI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RVO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7VI N N1 N 0 1 N N N 7.662 1.019 28.071 -2.984 0.581 -0.188 N 7VI 1 7VI C C1 C 0 1 Y N N 4.850 0.417 32.702 -9.077 -1.462 1.517 C 7VI 2 7VI O O1 O 0 1 N N N 5.957 -0.520 28.486 -5.295 0.289 -0.051 O 7VI 3 7VI C1 C2 C 0 1 Y N N 5.038 -0.784 33.382 -9.739 -0.362 2.028 C1 7VI 4 7VI C10 C3 C 0 1 N N N 9.696 2.271 28.375 -1.604 2.265 -1.302 C10 7VI 5 7VI C11 C4 C 0 1 N N N 9.708 1.675 29.779 -2.761 2.741 -2.182 C11 7VI 6 7VI C12 C5 C 0 1 N N N 10.377 3.636 28.313 -1.597 3.059 0.005 C12 7VI 7 7VI C13 C6 C 0 1 N N S 7.785 3.907 24.451 1.691 -0.609 -0.156 C13 7VI 8 7VI C14 C7 C 0 1 N N N 9.136 4.496 24.195 2.976 -0.288 -0.874 C14 7VI 9 7VI C15 C8 C 0 1 N N N 6.677 4.896 24.086 1.510 -2.127 -0.087 C15 7VI 10 7VI C16 C9 C 0 1 N N N 5.339 4.191 24.249 0.272 -2.455 0.750 C16 7VI 11 7VI C17 C10 C 0 1 N N S 11.143 4.424 22.819 5.400 -0.423 -1.085 C17 7VI 12 7VI C18 C11 C 0 1 N N N 11.155 5.172 21.487 5.645 -1.463 -2.180 C18 7VI 13 7VI C19 C12 C 0 1 N N N 12.079 3.215 22.731 6.561 -0.447 -0.089 C19 7VI 14 7VI C2 C13 C 0 1 Y N N 5.122 -1.984 32.679 -9.370 0.911 1.634 C2 7VI 15 7VI C20 C14 C 0 1 N N S 12.265 2.535 24.079 6.366 0.660 0.949 C20 7VI 16 7VI C21 C15 C 0 1 N N N 13.044 3.449 25.008 6.455 2.051 0.280 C21 7VI 17 7VI C22 C16 C 0 1 N N N 14.131 2.607 25.651 7.169 2.880 1.370 C22 7VI 18 7VI C23 C17 C 0 1 N N N 13.170 1.328 23.966 7.502 0.655 1.948 C23 7VI 19 7VI C24 C18 C 0 1 N N N 5.145 3.323 23.003 -0.017 -3.931 1.035 C24 7VI 20 7VI C25 C19 C 0 1 N N N 4.322 4.600 23.187 -0.891 -3.157 0.045 C25 7VI 21 7VI C3 C20 C 0 1 Y N N 5.030 -2.003 31.287 -8.339 1.083 0.730 C3 7VI 22 7VI C4 C21 C 0 1 Y N N 4.837 -0.804 30.609 -7.677 -0.018 0.219 C4 7VI 23 7VI C5 C22 C 0 1 Y N N 4.741 0.399 31.315 -8.042 -1.290 0.617 C5 7VI 24 7VI C6 C23 C 0 1 N N N 4.713 -0.831 29.106 -6.552 0.169 -0.767 C6 7VI 25 7VI C7 C24 C 0 1 N N N 6.415 0.853 28.455 -4.184 0.463 -0.791 C7 7VI 26 7VI C8 C25 C 0 1 N N S 8.282 2.298 27.813 -1.776 0.776 -0.993 C8 7VI 27 7VI C9 C26 C 0 1 N N N 8.361 2.502 26.333 -0.577 0.280 -0.228 C9 7VI 28 7VI N1 N2 N 0 1 N N N 7.636 3.508 25.833 0.565 -0.015 -0.881 N1 7VI 29 7VI N2 N3 N 0 1 N N N 9.780 4.025 23.124 4.150 -0.734 -0.386 N2 7VI 30 7VI N3 N4 N 0 1 N N N 14.186 1.410 24.823 7.935 1.910 2.161 N3 7VI 31 7VI O1 O2 O 0 1 N N N 5.649 1.761 28.772 -4.263 0.513 -2.002 O1 7VI 32 7VI O2 O3 O 0 1 N N N 9.059 1.768 25.645 -0.639 0.146 0.976 O2 7VI 33 7VI O3 O4 O 0 1 N N N 9.608 5.349 24.941 2.953 0.371 -1.892 O3 7VI 34 7VI O4 O5 O 0 1 N N N 12.977 0.401 23.201 7.956 -0.336 2.480 O4 7VI 35 7VI O5 O6 O 0 1 N N N 12.466 5.632 21.173 5.856 -2.743 -1.582 O5 7VI 36 7VI H1 H1 H 0 1 N N N 8.222 0.200 27.949 -2.922 0.541 0.779 H1 7VI 37 7VI H2 H2 H 0 1 N N N 4.790 1.349 33.244 -9.365 -2.457 1.825 H2 7VI 38 7VI H3 H3 H 0 1 N N N 5.119 -0.785 34.459 -10.545 -0.496 2.735 H3 7VI 39 7VI H4 H4 H 0 1 N N N 10.281 1.594 27.736 -0.661 2.420 -1.827 H4 7VI 40 7VI H5 H5 H 0 1 N N N 10.738 1.665 30.165 -2.639 3.801 -2.402 H5 7VI 41 7VI H6 H6 H 0 1 N N N 9.074 2.283 30.441 -2.766 2.174 -3.113 H6 7VI 42 7VI H7 H7 H 0 1 N N N 9.320 0.646 29.744 -3.704 2.585 -1.657 H7 7VI 43 7VI H8 H8 H 0 1 N N N 11.392 3.559 28.730 -1.406 4.111 -0.209 H8 7VI 44 7VI H9 H9 H 0 1 N N N 10.435 3.969 27.266 -2.565 2.959 0.497 H9 7VI 45 7VI H10 H10 H 0 1 N N N 9.794 4.363 28.898 -0.815 2.674 0.661 H10 7VI 46 7VI H11 H11 H 0 1 N N N 7.669 3.020 23.810 1.728 -0.201 0.855 H11 7VI 47 7VI H12 H12 H 0 1 N N N 6.800 5.225 23.044 1.384 -2.524 -1.094 H12 7VI 48 7VI H13 H13 H 0 1 N N N 6.722 5.769 24.754 2.389 -2.577 0.374 H13 7VI 49 7VI H14 H14 H 0 1 N N N 5.007 3.835 25.235 0.026 -1.735 1.530 H14 7VI 50 7VI H15 H15 H 0 1 N N N 11.515 5.099 23.604 5.327 0.568 -1.534 H15 7VI 51 7VI H16 H16 H 0 1 N N N 10.477 6.035 21.553 4.778 -1.508 -2.839 H16 7VI 52 7VI H17 H17 H 0 1 N Y N 10.811 4.495 20.691 6.526 -1.182 -2.757 H17 7VI 53 7VI H18 H18 H 0 1 N N N 11.654 2.488 22.023 6.589 -1.415 0.413 H18 7VI 54 7VI H19 H19 H 0 1 N N N 13.060 3.552 22.366 7.499 -0.286 -0.620 H19 7VI 55 7VI H20 H20 H 0 1 N N N 5.260 -2.910 33.218 -9.888 1.771 2.033 H20 7VI 56 7VI H21 H21 H 0 1 N N N 11.294 2.261 24.518 5.409 0.541 1.457 H21 7VI 57 7VI H22 H22 H 0 1 N N N 13.494 4.274 24.436 7.052 2.008 -0.631 H22 7VI 58 7VI H23 H23 H 0 1 N N N 12.377 3.859 25.781 5.461 2.449 0.075 H23 7VI 59 7VI H24 H24 H 0 1 N N N 13.867 2.353 26.688 7.839 3.608 0.913 H24 7VI 60 7VI H25 H25 H 0 1 N N N 15.095 3.136 25.637 6.436 3.386 2.000 H25 7VI 61 7VI H26 H26 H 0 1 N N N 4.661 2.339 23.088 0.675 -4.667 0.626 H26 7VI 62 7VI H27 H27 H 0 1 N N N 5.930 3.280 22.234 -0.453 -4.181 2.002 H27 7VI 63 7VI H28 H28 H 0 1 N N N 4.515 5.475 22.549 -1.901 -2.898 0.361 H28 7VI 64 7VI H29 H29 H 0 1 N N N 3.245 4.534 23.403 -0.774 -3.385 -1.015 H29 7VI 65 7VI H30 H30 H 0 1 N N N 5.107 -2.934 30.745 -8.051 2.077 0.422 H30 7VI 66 7VI H31 H31 H 0 1 N N N 4.581 1.323 30.779 -7.525 -2.150 0.218 H31 7VI 67 7VI H32 H32 H 0 1 N N N 3.961 -0.092 28.794 -6.727 1.074 -1.349 H32 7VI 68 7VI H33 H33 H 0 1 N N N 4.394 -1.835 28.789 -6.509 -0.690 -1.436 H33 7VI 69 7VI H34 H34 H 0 1 N N N 7.710 3.114 28.279 -1.867 0.220 -1.926 H34 7VI 70 7VI H35 H35 H 0 1 N N N 6.985 3.989 26.420 0.640 0.165 -1.831 H35 7VI 71 7VI H36 H36 H 0 1 N N N 9.313 3.382 22.517 4.168 -1.262 0.428 H36 7VI 72 7VI H37 H37 H 0 1 N N N 14.910 0.723 24.891 8.662 2.144 2.760 H37 7VI 73 7VI H38 H38 H 0 1 N N N 12.450 6.093 20.343 6.018 -3.453 -2.218 H38 7VI 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7VI O5 C18 SING N N 1 7VI C18 C17 SING N N 2 7VI C19 C17 SING N N 3 7VI C19 C20 SING N N 4 7VI C17 N2 SING N N 5 7VI C24 C25 SING N N 6 7VI C24 C16 SING N N 7 7VI N2 C14 SING N N 8 7VI C25 C16 SING N N 9 7VI O4 C23 DOUB N N 10 7VI C23 C20 SING N N 11 7VI C23 N3 SING N N 12 7VI C20 C21 SING N N 13 7VI C15 C16 SING N N 14 7VI C15 C13 SING N N 15 7VI C14 C13 SING N N 16 7VI C14 O3 DOUB N N 17 7VI C13 N1 SING N N 18 7VI N3 C22 SING N N 19 7VI C21 C22 SING N N 20 7VI O2 C9 DOUB N N 21 7VI N1 C9 SING N N 22 7VI C9 C8 SING N N 23 7VI C8 N SING N N 24 7VI C8 C10 SING N N 25 7VI N C7 SING N N 26 7VI C12 C10 SING N N 27 7VI C10 C11 SING N N 28 7VI C7 O SING N N 29 7VI C7 O1 DOUB N N 30 7VI O C6 SING N N 31 7VI C6 C4 SING N N 32 7VI C4 C3 DOUB Y N 33 7VI C4 C5 SING Y N 34 7VI C3 C2 SING Y N 35 7VI C5 C DOUB Y N 36 7VI C2 C1 DOUB Y N 37 7VI C C1 SING Y N 38 7VI N H1 SING N N 39 7VI C H2 SING N N 40 7VI C1 H3 SING N N 41 7VI C10 H4 SING N N 42 7VI C11 H5 SING N N 43 7VI C11 H6 SING N N 44 7VI C11 H7 SING N N 45 7VI C12 H8 SING N N 46 7VI C12 H9 SING N N 47 7VI C12 H10 SING N N 48 7VI C13 H11 SING N N 49 7VI C15 H12 SING N N 50 7VI C15 H13 SING N N 51 7VI C16 H14 SING N N 52 7VI C17 H15 SING N N 53 7VI C18 H16 SING N N 54 7VI C18 H17 SING N N 55 7VI C19 H18 SING N N 56 7VI C19 H19 SING N N 57 7VI C2 H20 SING N N 58 7VI C20 H21 SING N N 59 7VI C21 H22 SING N N 60 7VI C21 H23 SING N N 61 7VI C22 H24 SING N N 62 7VI C22 H25 SING N N 63 7VI C24 H26 SING N N 64 7VI C24 H27 SING N N 65 7VI C25 H28 SING N N 66 7VI C25 H29 SING N N 67 7VI C3 H30 SING N N 68 7VI C5 H31 SING N N 69 7VI C6 H32 SING N N 70 7VI C6 H33 SING N N 71 7VI C8 H34 SING N N 72 7VI N1 H35 SING N N 73 7VI N2 H36 SING N N 74 7VI N3 H37 SING N N 75 7VI O5 H38 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7VI SMILES ACDLabs 12.01 "CC(C)C(NC(=O)OCc1ccccc1)C(=O)NC(CC1CC1)C(=O)NC(CC1CCNC1=O)CO" 7VI InChI InChI 1.03 "InChI=1S/C26H38N4O6/c1-16(2)22(30-26(35)36-15-18-6-4-3-5-7-18)25(34)29-21(12-17-8-9-17)24(33)28-20(14-31)13-19-10-11-27-23(19)32/h3-7,16-17,19-22,31H,8-15H2,1-2H3,(H,27,32)(H,28,33)(H,29,34)(H,30,35)/t19-,20-,21-,22-/m0/s1" 7VI InChIKey InChI 1.03 OBXMCOOSINYKTR-CMOCDZPBSA-N 7VI SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](CC2CC2)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O" 7VI SMILES CACTVS 3.385 "CC(C)[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](CC2CC2)C(=O)N[CH](CO)C[CH]3CCNC3=O" 7VI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](C(=O)N[C@@H](CC1CC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO)NC(=O)OCc3ccccc3" 7VI SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(=O)NC(CC1CC1)C(=O)NC(CC2CCNC2=O)CO)NC(=O)OCc3ccccc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7VI "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-L-valyl-3-cyclopropyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-alaninamide" 7VI "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-1-[[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7VI "Create component" 2021-08-23 RCSB 7VI "Initial release" 2022-07-20 RCSB #