data_7VJ # _chem_comp.id 7VJ _chem_comp.name "2-amino-6-(methylamino)-5-nitrosopyrimidin-4(3H)-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H7 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 6-METHYLAMINO-5-NITROSOISOCYTOSINE _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2016-12-08 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 169.141 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7VJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5U0V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7VJ N3 N1 N 0 1 N N N 16.702 -6.995 49.252 -1.709 -1.405 -0.036 N3 7VJ 1 7VJ O2 O1 O 0 1 N N N 17.018 -8.164 49.473 -2.885 -1.103 0.066 O2 7VJ 2 7VJ C2 C1 C 0 1 N N N 17.533 -6.041 49.645 -0.784 -0.467 -0.023 C2 7VJ 3 7VJ C1 C2 C 0 1 N N N 18.716 -6.175 50.306 0.651 -0.800 -0.029 C1 7VJ 4 7VJ N2 N2 N 0 1 N N N 19.184 -7.417 50.647 1.066 -2.102 -0.048 N2 7VJ 5 7VJ C5 C3 C 0 1 N N N 20.387 -7.538 51.483 2.492 -2.418 0.058 C5 7VJ 6 7VJ N1 N3 N 0 1 N N N 19.456 -5.092 50.642 1.533 0.193 -0.016 N1 7VJ 7 7VJ C4 C4 C 0 1 N N N 19.028 -3.913 50.349 1.166 1.459 0.002 C4 7VJ 8 7VJ N5 N4 N 0 1 N N N 19.694 -2.767 50.640 2.139 2.412 0.014 N5 7VJ 9 7VJ N4 N5 N 0 1 N N N 17.830 -3.688 49.676 -0.130 1.865 0.009 N4 7VJ 10 7VJ C3 C5 C 0 1 N N N 17.027 -4.715 49.296 -1.140 0.969 -0.009 C3 7VJ 11 7VJ O1 O2 O 0 1 N N N 15.959 -4.556 48.701 -2.301 1.330 -0.009 O1 7VJ 12 7VJ H1 H1 H 0 1 N N N 18.445 -7.882 51.134 0.416 -2.817 -0.132 H1 7VJ 13 7VJ H2 H2 H 0 1 N N N 20.611 -8.602 51.652 2.628 -3.499 0.025 H2 7VJ 14 7VJ H3 H3 H 0 1 N N N 21.237 -7.061 50.973 3.029 -1.959 -0.772 H3 7VJ 15 7VJ H4 H4 H 0 1 N N N 20.213 -7.042 52.449 2.881 -2.032 1.000 H4 7VJ 16 7VJ H5 H5 H 0 1 N N N 20.575 -2.807 51.111 3.074 2.151 0.009 H5 7VJ 17 7VJ H6 H6 H 0 1 N N N 19.304 -1.883 50.383 1.898 3.351 0.027 H6 7VJ 18 7VJ H7 H7 H 0 1 N N N 17.555 -2.749 49.468 -0.333 2.814 0.022 H7 7VJ 19 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7VJ O1 C3 DOUB N N 1 7VJ N3 O2 DOUB N N 2 7VJ N3 C2 SING N N 3 7VJ C3 C2 SING N N 4 7VJ C3 N4 SING N N 5 7VJ C2 C1 DOUB N N 6 7VJ N4 C4 SING N N 7 7VJ C1 N1 SING N N 8 7VJ C1 N2 SING N N 9 7VJ C4 N5 SING N N 10 7VJ C4 N1 DOUB N N 11 7VJ N2 C5 SING N N 12 7VJ N2 H1 SING N N 13 7VJ C5 H2 SING N N 14 7VJ C5 H3 SING N N 15 7VJ C5 H4 SING N N 16 7VJ N5 H5 SING N N 17 7VJ N5 H6 SING N N 18 7VJ N4 H7 SING N N 19 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7VJ SMILES ACDLabs 12.01 "N(=O)C1=C(N=C(N)NC1=O)NC" 7VJ InChI InChI 1.03 "InChI=1S/C5H7N5O2/c1-7-3-2(10-12)4(11)9-5(6)8-3/h1H3,(H4,6,7,8,9,11)" 7VJ InChIKey InChI 1.03 ISOZZGJCVBHMSM-UHFFFAOYSA-N 7VJ SMILES_CANONICAL CACTVS 3.385 "CNC1=C(N=O)C(=O)NC(=N1)N" 7VJ SMILES CACTVS 3.385 "CNC1=C(N=O)C(=O)NC(=N1)N" 7VJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CNC1=C(C(=O)NC(=N1)N)N=O" 7VJ SMILES "OpenEye OEToolkits" 2.0.6 "CNC1=C(C(=O)NC(=N1)N)N=O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7VJ "SYSTEMATIC NAME" ACDLabs 12.01 "2-amino-6-(methylamino)-5-nitrosopyrimidin-4(3H)-one" 7VJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-azanyl-4-(methylamino)-5-nitroso-1~{H}-pyrimidin-6-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7VJ "Create component" 2016-12-08 RCSB 7VJ "Initial release" 2017-12-06 RCSB 7VJ "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 7VJ _pdbx_chem_comp_synonyms.name 6-METHYLAMINO-5-NITROSOISOCYTOSINE _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##