data_7VN # _chem_comp.id 7VN _chem_comp.name "(2S)-2-cyclopentyl-2-(methylamino)ethanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C8 H15 N O2" _chem_comp.mon_nstd_parent_comp_id ALA _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-10-29 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 157.210 _chem_comp.one_letter_code A _chem_comp.three_letter_code 7VN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7VO3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7VN N N N 0 1 N N N Y Y N -19.111 -11.954 41.654 -1.273 1.489 0.296 N 7VN 1 7VN C C C 0 1 N N N Y N Y -19.682 -13.891 43.094 -1.460 -0.919 0.032 C 7VN 2 7VN O O O 0 1 N N N Y N Y -19.867 -13.671 44.288 -2.540 -0.793 0.558 O 7VN 3 7VN CA CA C 0 1 N N S Y N N -18.581 -13.134 42.345 -0.589 0.288 -0.201 CA 7VN 4 7VN CB CB C 0 1 N N N N N N -17.416 -12.806 43.278 0.737 0.112 0.542 CB 7VN 5 7VN CG1 CG1 C 0 1 N N N N N N -16.767 -14.020 43.967 1.465 -1.143 0.031 CG1 7VN 6 7VN CG2 CG2 C 0 1 N N N N N N -16.263 -12.057 42.592 1.667 1.309 0.255 CG2 7VN 7 7VN CD1 CD1 C 0 1 N N N N N N -15.324 -14.038 43.448 2.812 -0.665 -0.549 CD1 7VN 8 7VN CD2 CD2 C 0 1 N N N N N N -15.017 -12.574 43.276 3.080 0.680 0.170 CD2 7VN 9 7VN CN CN C 0 1 N N N N N N -19.750 -10.959 42.519 -2.188 2.032 -0.717 CN 7VN 10 7VN H H H 0 1 N Y N Y Y N -18.353 -11.508 41.177 -1.762 1.296 1.158 H1 7VN 11 7VN HA H4 H 0 1 N N N Y N N -18.191 -13.819 41.578 -0.395 0.396 -1.268 H4 7VN 12 7VN H5 H5 H 0 1 N N N N N N -17.805 -12.151 44.071 0.555 0.028 1.614 H5 7VN 13 7VN H6 H6 H 0 1 N N N N N N -16.784 -13.900 45.060 1.638 -1.836 0.854 H6 7VN 14 7VN H7 H7 H 0 1 N N N N N N -17.290 -14.948 43.691 0.874 -1.627 -0.746 H7 7VN 15 7VN H8 H8 H 0 1 N N N N N N -16.364 -10.971 42.736 1.401 1.780 -0.691 H8 7VN 16 7VN H9 H9 H 0 1 N N N N N N -16.238 -12.283 41.516 1.620 2.033 1.069 H9 7VN 17 7VN H10 H10 H 0 1 N N N N N N -15.254 -14.573 42.490 3.601 -1.383 -0.322 H10 7VN 18 7VN H11 H11 H 0 1 N N N N N N -14.645 -14.503 44.178 2.732 -0.516 -1.626 H11 7VN 19 7VN H12 H12 H 0 1 N N N N N N -14.127 -12.426 42.647 3.747 1.308 -0.421 H12 7VN 20 7VN H13 H13 H 0 1 N N N N N N -14.864 -12.083 44.248 3.488 0.511 1.166 H13 7VN 21 7VN H14 H14 H 0 1 N N N N N N -20.111 -10.119 41.908 -1.624 2.296 -1.611 H14 7VN 22 7VN H15 H15 H 0 1 N N N N N N -20.598 -11.421 43.045 -2.937 1.281 -0.969 H15 7VN 23 7VN H16 H16 H 0 1 N N N N N N -19.020 -10.590 43.254 -2.681 2.920 -0.323 H16 7VN 24 7VN OXT OXT O 0 1 N Y N Y N Y -20.421 -14.799 42.417 -1.036 -2.136 -0.345 O1 7VN 25 7VN HXT HXT H 0 1 N Y N Y N Y -21.054 -15.194 43.005 -1.629 -2.880 -0.175 H17 7VN 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7VN N CA SING N N 1 7VN N CN SING N N 2 7VN CA C SING N N 3 7VN CA CB SING N N 4 7VN CG2 CD2 SING N N 5 7VN CG2 CB SING N N 6 7VN C O DOUB N N 7 7VN CD2 CD1 SING N N 8 7VN CB CG1 SING N N 9 7VN CD1 CG1 SING N N 10 7VN N H SING N N 11 7VN CA HA SING N N 12 7VN CB H5 SING N N 13 7VN CG1 H6 SING N N 14 7VN CG1 H7 SING N N 15 7VN CG2 H8 SING N N 16 7VN CG2 H9 SING N N 17 7VN CD1 H10 SING N N 18 7VN CD1 H11 SING N N 19 7VN CD2 H12 SING N N 20 7VN CD2 H13 SING N N 21 7VN CN H14 SING N N 22 7VN CN H15 SING N N 23 7VN CN H16 SING N N 24 7VN C OXT SING N N 25 7VN OXT HXT SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7VN InChI InChI 1.03 "InChI=1S/C8H15NO2/c1-9-7(8(10)11)6-4-2-3-5-6/h6-7,9H,2-5H2,1H3,(H,10,11)/t7-/m0/s1" 7VN InChIKey InChI 1.03 WPRPSYRCLINFTF-ZETCQYMHSA-N 7VN SMILES_CANONICAL CACTVS 3.385 "CN[C@@H](C1CCCC1)C(O)=O" 7VN SMILES CACTVS 3.385 "CN[CH](C1CCCC1)C(O)=O" 7VN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN[C@@H](C1CCCC1)C(=O)O" 7VN SMILES "OpenEye OEToolkits" 2.0.7 "CNC(C1CCCC1)C(=O)O" # _pdbx_chem_comp_identifier.comp_id 7VN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-cyclopentyl-2-(methylamino)ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7VN "Create component" 2021-10-29 PDBJ 7VN "Initial release" 2023-07-26 RCSB 7VN "Modify backbone" 2023-11-03 PDBE #