data_7XF # _chem_comp.id 7XF _chem_comp.name "(2~{S})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-4-sulfanyl-butanoic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H19 N2 O7 P S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-03 _chem_comp.pdbx_modified_date 2017-04-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 366.327 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7XF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5X30 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7XF OAF O1 O 0 1 N N N 44.447 3.424 -46.187 4.281 -1.812 1.025 OAF 7XF 1 7XF PAW P1 P 0 1 N N N 45.741 4.035 -45.916 4.152 -1.220 -0.325 PAW 7XF 2 7XF OAG O2 O 0 1 N N N 46.724 3.022 -45.450 5.602 -0.757 -0.850 OAG 7XF 3 7XF OAC O3 O 0 1 N N N 45.609 5.184 -45.009 3.541 -2.316 -1.335 OAC 7XF 4 7XF OAP O4 O 0 1 N N N 46.318 4.615 -47.335 3.172 0.056 -0.261 OAP 7XF 5 7XF CAM C1 C 0 1 N N N 45.599 5.616 -48.074 1.844 -0.009 0.264 CAM 7XF 6 7XF CAS C2 C 0 1 Y N N 46.072 5.500 -49.529 1.203 1.353 0.177 CAS 7XF 7 7XF CAI C3 C 0 1 Y N N 47.069 6.376 -49.945 1.902 2.422 -0.352 CAI 7XF 8 7XF NAN N1 N 0 1 Y N N 47.557 6.357 -51.175 1.351 3.617 -0.432 NAN 7XF 9 7XF CAR C4 C 0 1 Y N N 47.093 5.441 -52.130 0.121 3.844 -0.015 CAR 7XF 10 7XF CAA C5 C 0 1 N N N 47.653 5.429 -53.554 -0.459 5.231 -0.124 CAA 7XF 11 7XF CAT C6 C 0 1 Y N N 46.121 4.547 -51.731 -0.643 2.821 0.527 CAT 7XF 12 7XF OAE O5 O 0 1 N N N 45.672 3.648 -52.634 -1.910 3.060 0.955 OAE 7XF 13 7XF CAU C7 C 0 1 Y N N 45.581 4.541 -50.440 -0.094 1.546 0.622 CAU 7XF 14 7XF CAL C8 C 0 1 N N N 44.446 3.569 -50.057 -0.889 0.405 1.204 CAL 7XF 15 7XF N N2 N 0 1 N N N 43.631 3.145 -51.149 -1.635 -0.269 0.133 N 7XF 16 7XF CA C9 C 0 1 N N S 42.464 2.337 -50.993 -2.423 -1.389 0.665 CA 7XF 17 7XF C C10 C 0 1 N N N 41.717 2.220 -52.240 -1.556 -2.619 0.746 C 7XF 18 7XF O O6 O 0 1 N N N 41.429 3.217 -52.925 -0.400 -2.568 0.398 O 7XF 19 7XF OXT O7 O 0 1 N N N 41.313 1.121 -52.655 -2.068 -3.771 1.207 OXT 7XF 20 7XF CB C11 C 0 1 N N N 41.677 2.725 -49.952 -3.610 -1.662 -0.261 CB 7XF 21 7XF CAJ C12 C 0 1 N N N 40.669 1.673 -49.573 -4.555 -0.459 -0.247 CAJ 7XF 22 7XF SAH S1 S 0 1 N N N 39.547 2.555 -48.430 -5.963 -0.783 -1.345 SAH 7XF 23 7XF H1 H1 H 0 1 N N N 46.309 2.168 -45.421 6.245 -1.476 -0.913 H1 7XF 24 7XF H2 H2 H 0 1 N N N 44.695 5.301 -44.777 3.428 -1.997 -2.240 H2 7XF 25 7XF H3 H3 H 0 1 N N N 45.825 6.617 -47.679 1.259 -0.723 -0.314 H3 7XF 26 7XF H4 H4 H 0 1 N N N 44.516 5.433 -48.010 1.880 -0.327 1.306 H4 7XF 27 7XF H5 H5 H 0 1 N N N 47.458 7.096 -49.240 2.912 2.276 -0.704 H5 7XF 28 7XF H6 H6 H 0 1 N N N 48.418 6.213 -53.654 -0.237 5.790 0.784 H6 7XF 29 7XF H7 H7 H 0 1 N N N 48.104 4.448 -53.762 -0.021 5.741 -0.982 H7 7XF 30 7XF H8 H8 H 0 1 N N N 46.839 5.618 -54.270 -1.539 5.163 -0.254 H8 7XF 31 7XF H9 H9 H 0 1 N N N 45.010 3.098 -52.232 -2.586 2.933 0.275 H9 7XF 32 7XF H10 H10 H 0 1 N N N 43.800 4.070 -49.321 -0.211 -0.305 1.677 H10 7XF 33 7XF H11 H11 H 0 1 N N N 44.899 2.676 -49.600 -1.588 0.791 1.946 H11 7XF 34 7XF H12 H12 H 0 1 N N N 44.237 2.636 -51.761 -1.015 -0.579 -0.600 H12 7XF 35 7XF H14 H14 H 0 1 N N N 42.823 1.323 -50.763 -2.789 -1.135 1.660 H14 7XF 36 7XF H15 H15 H 0 1 N N N 40.831 1.245 -53.464 -1.473 -4.533 1.240 H15 7XF 37 7XF H16 H16 H 0 1 N N N 42.318 2.930 -49.082 -3.248 -1.828 -1.276 H16 7XF 38 7XF H17 H17 H 0 1 N N N 41.141 3.642 -50.237 -4.143 -2.548 0.084 H17 7XF 39 7XF H18 H18 H 0 1 N N N 40.125 1.312 -50.458 -4.917 -0.293 0.768 H18 7XF 40 7XF H19 H19 H 0 1 N N N 41.156 0.824 -49.070 -4.022 0.426 -0.592 H19 7XF 41 7XF H20 H20 H 0 1 N N N 38.691 1.626 -48.121 -6.697 0.338 -1.235 H20 7XF 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7XF CAA CAR SING N N 1 7XF O C DOUB N N 2 7XF OXT C SING N N 3 7XF OAE CAT SING N N 4 7XF C CA SING N N 5 7XF CAR CAT DOUB Y N 6 7XF CAR NAN SING Y N 7 7XF CAT CAU SING Y N 8 7XF NAN CAI DOUB Y N 9 7XF N CA SING N N 10 7XF N CAL SING N N 11 7XF CA CB SING N N 12 7XF CAU CAL SING N N 13 7XF CAU CAS DOUB Y N 14 7XF CB CAJ SING N N 15 7XF CAI CAS SING Y N 16 7XF CAJ SAH SING N N 17 7XF CAS CAM SING N N 18 7XF CAM OAP SING N N 19 7XF OAP PAW SING N N 20 7XF OAF PAW DOUB N N 21 7XF PAW OAG SING N N 22 7XF PAW OAC SING N N 23 7XF OAG H1 SING N N 24 7XF OAC H2 SING N N 25 7XF CAM H3 SING N N 26 7XF CAM H4 SING N N 27 7XF CAI H5 SING N N 28 7XF CAA H6 SING N N 29 7XF CAA H7 SING N N 30 7XF CAA H8 SING N N 31 7XF OAE H9 SING N N 32 7XF CAL H10 SING N N 33 7XF CAL H11 SING N N 34 7XF N H12 SING N N 35 7XF CA H14 SING N N 36 7XF OXT H15 SING N N 37 7XF CB H16 SING N N 38 7XF CB H17 SING N N 39 7XF CAJ H18 SING N N 40 7XF CAJ H19 SING N N 41 7XF SAH H20 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7XF InChI InChI 1.03 "InChI=1S/C12H19N2O7PS/c1-7-11(15)9(5-14-10(2-3-23)12(16)17)8(4-13-7)6-21-22(18,19)20/h4,10,14-15,23H,2-3,5-6H2,1H3,(H,16,17)(H2,18,19,20)/t10-/m0/s1" 7XF InChIKey InChI 1.03 PXCMMZUTCUCUSM-JTQLQIEISA-N 7XF SMILES_CANONICAL CACTVS 3.385 "Cc1ncc(CO[P](O)(O)=O)c(CN[C@@H](CCS)C(O)=O)c1O" 7XF SMILES CACTVS 3.385 "Cc1ncc(CO[P](O)(O)=O)c(CN[CH](CCS)C(O)=O)c1O" 7XF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c(c(c(cn1)COP(=O)(O)O)CN[C@@H](CCS)C(=O)O)O" 7XF SMILES "OpenEye OEToolkits" 2.0.6 "Cc1c(c(c(cn1)COP(=O)(O)O)CNC(CCS)C(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7XF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]-4-sulfanyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7XF "Create component" 2017-02-03 RCSB 7XF "Initial release" 2017-04-12 RCSB #