data_7XT # _chem_comp.id 7XT _chem_comp.name "N-[(benzyloxy)carbonyl]-3-methyl-L-isovalyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-4-methyl-L-leucinamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H44 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-08-23 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 532.672 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7XT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7RVU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7XT C1 C1 C 0 1 Y N N N N N 21.578 -23.483 -19.440 -7.056 4.321 -1.177 C1 7XT 1 7XT C10 C2 C 0 1 N N N N N N 16.186 -18.470 -18.464 -2.169 -3.140 0.059 C10 7XT 2 7XT C11 C3 C 0 1 N N S N N N 17.479 -17.784 -17.992 -1.826 -2.092 1.120 C11 7XT 3 7XT C12 C4 C 0 1 N N N N N N 17.246 -16.551 -17.122 -0.329 -1.934 1.204 C12 7XT 4 7XT C13 C5 C 0 1 N N N N N N 15.023 -17.487 -18.636 -1.433 -4.444 0.374 C13 7XT 5 7XT C14 C6 C 0 1 N N S N N N 17.778 -14.175 -16.782 1.775 -1.044 0.359 C14 7XT 6 7XT C15 C7 C 0 1 N N N N N N 16.465 -13.492 -16.970 2.226 0.129 -0.473 C15 7XT 7 7XT C16 C8 C 0 1 N N N N N N 15.815 -19.701 -17.639 -3.678 -3.392 0.061 C16 7XT 8 7XT C17 C9 C 0 1 N N S N N N 14.536 -12.342 -16.078 3.953 1.660 -1.254 C17 7XT 9 7XT C19 C10 C 0 1 N N N N N N 13.545 -13.084 -15.169 5.200 2.283 -0.624 C19 7XT 10 7XT C2 C11 C 0 1 Y N N N N N 21.341 -23.952 -18.152 -6.928 3.230 -2.017 C2 7XT 11 7XT C20 C12 C 0 1 N N S N N N 13.590 -14.585 -15.333 4.842 2.871 0.743 C20 7XT 12 7XT C21 C13 C 0 1 N N N N N N 12.792 -14.944 -16.585 6.080 3.535 1.388 C21 7XT 13 7XT C22 C14 C 0 1 N N N N N N 11.789 -15.992 -16.102 6.636 2.386 2.258 C22 7XT 14 7XT C23 C15 C 0 1 N N N N N N 20.343 -13.408 -15.204 2.708 -1.399 -2.509 C23 7XT 15 7XT C24 C16 C 0 1 N N N N N N 12.875 -15.232 -14.178 4.465 1.770 1.710 C24 7XT 16 7XT C27 C17 C 0 1 N N N N N N 14.442 -10.898 -15.633 4.281 1.183 -2.671 C27 7XT 17 7XT C3 C18 C 0 1 Y N N N N N 21.069 -23.071 -17.112 -6.516 2.012 -1.509 C3 7XT 18 7XT C30 C19 C 0 1 N N N N N N 18.106 -17.298 -19.290 -2.369 -2.544 2.477 C30 7XT 19 7XT C34 C20 C 0 1 N N N N N N 18.867 -13.206 -17.245 2.361 -2.334 -0.218 C34 7XT 20 7XT C35 C21 C 0 1 N N N N N N 20.294 -13.401 -16.720 1.967 -2.458 -1.691 C35 7XT 21 7XT C36 C22 C 0 1 N N N N N N 20.896 -14.683 -17.257 0.458 -2.250 -1.835 C36 7XT 22 7XT C37 C23 C 0 1 N N N N N N 21.194 -12.259 -17.191 2.340 -3.851 -2.203 C37 7XT 23 7XT C4 C24 C 0 1 Y N N N N N 21.036 -21.717 -17.373 -6.233 1.884 -0.162 C4 7XT 24 7XT C5 C25 C 0 1 Y N N N N N 21.275 -21.255 -18.662 -6.361 2.975 0.677 C5 7XT 25 7XT C6 C26 C 0 1 Y N N N N N 21.549 -22.123 -19.707 -6.767 4.195 0.169 C6 7XT 26 7XT C7 C27 C 0 1 N N N N N N 20.726 -20.719 -16.285 -5.785 0.556 0.391 C7 7XT 27 7XT C9 C28 C 0 1 N N N N N N 19.620 -18.481 -17.067 -3.772 -0.664 0.785 C9 7XT 28 7XT N10 N1 N 0 1 N N N N N N 18.346 -18.773 -17.360 -2.432 -0.810 0.753 N10 7XT 29 7XT N13 N2 N 0 1 N N N N N N 17.732 -15.384 -17.589 0.312 -1.121 0.342 N13 7XT 30 7XT N16 N3 N 0 1 N N N N N N 15.903 -12.844 -15.959 3.515 0.520 -0.445 N16 7XT 31 7XT N23 N4 N 0 1 N N N N N N 11.963 -16.074 -14.657 5.485 1.523 2.550 N23 7XT 32 7XT O26 O1 O 0 1 N N N N N N 13.095 -14.992 -12.979 3.398 1.194 1.725 O26 7XT 33 7XT O28 O2 O 0 1 N N N N N N 13.024 -10.640 -15.593 5.402 0.297 -2.628 O28 7XT 34 7XT O29 O3 O 0 1 N N N N N N 19.989 -17.346 -16.912 -4.469 -1.555 1.227 O29 7XT 35 7XT O33 O4 O 0 1 N N N N N N 16.658 -16.621 -16.054 0.297 -2.539 2.048 O33 7XT 36 7XT O38 O5 O 0 1 N N N N N N 15.946 -13.528 -18.063 1.428 0.721 -1.169 O38 7XT 37 7XT O8 O6 O 0 1 N N N N N N 20.709 -19.457 -16.960 -4.337 0.468 0.326 O8 7XT 38 7XT H1 H1 H 0 1 N N N N N N 21.786 -24.182 -20.236 -7.377 5.273 -1.573 H1 7XT 39 7XT H2 H2 H 0 1 N N N N N N 16.405 -18.846 -19.474 -1.863 -2.778 -0.922 H2 7XT 40 7XT H3 H3 H 0 1 N N N N N N 14.129 -18.032 -18.973 -1.797 -4.847 1.319 H3 7XT 41 7XT H4 H4 H 0 1 N N N N N N 14.812 -16.997 -17.674 -1.615 -5.165 -0.423 H4 7XT 42 7XT H5 H5 H 0 1 N N N N N N 15.293 -16.727 -19.384 -0.364 -4.249 0.449 H5 7XT 43 7XT H6 H6 H 0 1 N N N N N N 17.929 -14.421 -15.721 2.120 -0.915 1.385 H6 7XT 44 7XT H7 H7 H 0 1 N N N N N N 16.689 -20.363 -17.554 -4.191 -2.530 -0.363 H7 7XT 45 7XT H8 H8 H 0 1 N N N N N N 15.494 -19.386 -16.635 -3.899 -4.277 -0.537 H8 7XT 46 7XT H9 H9 H 0 1 N N N N N N 14.994 -20.240 -18.134 -4.019 -3.551 1.084 H9 7XT 47 7XT H10 H10 H 0 1 N N N N N N 14.195 -12.423 -17.121 3.157 2.403 -1.296 H10 7XT 48 7XT H11 H11 H 0 1 N N N N N N 13.781 -12.840 -14.123 5.966 1.518 -0.501 H11 7XT 49 7XT H12 H12 H 0 1 N N N N N N 12.528 -12.738 -15.405 5.578 3.074 -1.272 H12 7XT 50 7XT H13 H13 H 0 1 N N N N N N 21.369 -25.014 -17.958 -7.150 3.330 -3.069 H13 7XT 51 7XT H14 H14 H 0 1 N N N N N N 14.627 -14.945 -15.412 4.028 3.589 0.646 H14 7XT 52 7XT H15 H15 H 0 1 N N N N N N 13.450 -15.362 -17.361 6.803 3.834 0.628 H15 7XT 53 7XT H16 H16 H 0 1 N N N N N N 12.272 -14.060 -16.983 5.790 4.386 2.004 H16 7XT 54 7XT H17 H17 H 0 1 N N N N N N 10.763 -15.681 -16.347 7.395 1.830 1.709 H17 7XT 55 7XT H18 H18 H 0 1 N N N N N N 19.905 -12.476 -14.818 3.768 -1.421 -2.256 H18 7XT 56 7XT H19 H19 H 0 1 N N N N N N 19.771 -14.267 -14.823 2.584 -1.607 -3.572 H19 7XT 57 7XT H20 H20 H 0 1 N N N N N N 21.389 -13.487 -14.871 2.301 -0.414 -2.282 H20 7XT 58 7XT H21 H21 H 0 1 N N N N N N 14.892 -10.765 -14.638 3.421 0.660 -3.087 H21 7XT 59 7XT H22 H22 H 0 1 N Y N N N N 14.941 -10.233 -16.353 4.522 2.043 -3.296 H22 7XT 60 7XT H23 H23 H 0 1 N N N N N N 20.886 -23.441 -16.114 -6.417 1.160 -2.165 H23 7XT 61 7XT H24 H24 H 0 1 N N N N N N 19.053 -16.783 -19.070 -1.918 -3.498 2.750 H24 7XT 62 7XT H25 H25 H 0 1 N N N N N N 18.301 -18.158 -19.948 -2.124 -1.797 3.233 H25 7XT 63 7XT H26 H26 H 0 1 N N N N N N 17.418 -16.602 -19.791 -3.451 -2.658 2.416 H26 7XT 64 7XT H27 H27 H 0 1 N N N N N N 18.913 -13.271 -18.342 3.447 -2.310 -0.133 H27 7XT 65 7XT H28 H28 H 0 1 N N N N N N 18.548 -12.195 -16.950 1.972 -3.189 0.335 H28 7XT 66 7XT H29 H29 H 0 1 N N N N N N 21.918 -14.800 -16.867 0.229 -1.187 -1.755 H29 7XT 67 7XT H30 H30 H 0 1 N N N N N N 20.282 -15.538 -16.938 0.131 -2.620 -2.807 H30 7XT 68 7XT H31 H31 H 0 1 N N N N N N 20.926 -14.642 -18.356 -0.061 -2.794 -1.046 H31 7XT 69 7XT H32 H32 H 0 1 N N N N N N 20.795 -11.302 -16.824 1.812 -4.606 -1.621 H32 7XT 70 7XT H33 H33 H 0 1 N N N N N N 22.211 -12.408 -16.798 2.060 -3.940 -3.253 H33 7XT 71 7XT H34 H34 H 0 1 N N N N N N 21.224 -12.246 -18.291 3.415 -4.000 -2.101 H34 7XT 72 7XT H35 H35 H 0 1 N N N N N N 21.246 -20.193 -18.854 -6.139 2.875 1.730 H35 7XT 73 7XT H36 H36 H 0 1 N N N N N N 21.735 -21.750 -20.703 -6.867 5.047 0.825 H36 7XT 74 7XT H37 H37 H 0 1 N N N N N N 19.748 -20.931 -15.829 -6.108 0.467 1.428 H37 7XT 75 7XT H38 H38 H 0 1 N N N N N N 21.504 -20.735 -15.508 -6.224 -0.249 -0.198 H38 7XT 76 7XT H39 H39 H 0 1 N N N N N N 17.985 -19.680 -17.143 -1.869 -0.065 0.488 H39 7XT 77 7XT H40 H40 H 0 1 N N N N N N 18.075 -15.348 -18.528 -0.194 -0.587 -0.289 H40 7XT 78 7XT H41 H41 H 0 1 N N N N N N 16.416 -12.698 -15.113 4.153 0.046 0.111 H41 7XT 79 7XT H42 H42 H 0 1 N N N N N N 12.872 -9.743 -15.319 5.666 -0.044 -3.493 H42 7XT 80 7XT H43 H43 H 0 1 N N N N N N 11.998 -16.966 -16.569 7.054 2.783 3.184 H43 7XT 81 7XT H44 H44 H 0 1 N N N N N N 11.445 -16.705 -14.079 5.463 0.860 3.257 H44 7XT 82 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7XT C6 C1 DOUB Y N 1 7XT C6 C5 SING Y N 2 7XT C1 C2 SING Y N 3 7XT C30 C11 SING N N 4 7XT C5 C4 DOUB Y N 5 7XT C13 C10 SING N N 6 7XT C10 C11 SING N N 7 7XT C10 C16 SING N N 8 7XT C2 C3 DOUB Y N 9 7XT O38 C15 DOUB N N 10 7XT C11 N10 SING N N 11 7XT C11 C12 SING N N 12 7XT N13 C12 SING N N 13 7XT N13 C14 SING N N 14 7XT C4 C3 SING Y N 15 7XT C4 C7 SING N N 16 7XT N10 C9 SING N N 17 7XT C36 C35 SING N N 18 7XT C34 C14 SING N N 19 7XT C34 C35 SING N N 20 7XT C37 C35 SING N N 21 7XT C12 O33 DOUB N N 22 7XT C9 O8 SING N N 23 7XT C9 O29 DOUB N N 24 7XT C15 C14 SING N N 25 7XT C15 N16 SING N N 26 7XT O8 C7 SING N N 27 7XT C35 C23 SING N N 28 7XT C21 C22 SING N N 29 7XT C21 C20 SING N N 30 7XT C22 N23 SING N N 31 7XT C17 N16 SING N N 32 7XT C17 C27 SING N N 33 7XT C17 C19 SING N N 34 7XT C27 O28 SING N N 35 7XT C20 C19 SING N N 36 7XT C20 C24 SING N N 37 7XT N23 C24 SING N N 38 7XT C24 O26 DOUB N N 39 7XT C1 H1 SING N N 40 7XT C10 H2 SING N N 41 7XT C13 H3 SING N N 42 7XT C13 H4 SING N N 43 7XT C13 H5 SING N N 44 7XT C14 H6 SING N N 45 7XT C16 H7 SING N N 46 7XT C16 H8 SING N N 47 7XT C16 H9 SING N N 48 7XT C17 H10 SING N N 49 7XT C19 H11 SING N N 50 7XT C19 H12 SING N N 51 7XT C2 H13 SING N N 52 7XT C20 H14 SING N N 53 7XT C21 H15 SING N N 54 7XT C21 H16 SING N N 55 7XT C22 H17 SING N N 56 7XT C23 H18 SING N N 57 7XT C23 H19 SING N N 58 7XT C23 H20 SING N N 59 7XT C27 H21 SING N N 60 7XT C27 H22 SING N N 61 7XT C3 H23 SING N N 62 7XT C30 H24 SING N N 63 7XT C30 H25 SING N N 64 7XT C30 H26 SING N N 65 7XT C34 H27 SING N N 66 7XT C34 H28 SING N N 67 7XT C36 H29 SING N N 68 7XT C36 H30 SING N N 69 7XT C36 H31 SING N N 70 7XT C37 H32 SING N N 71 7XT C37 H33 SING N N 72 7XT C37 H34 SING N N 73 7XT C5 H35 SING N N 74 7XT C6 H36 SING N N 75 7XT C7 H37 SING N N 76 7XT C7 H38 SING N N 77 7XT N10 H39 SING N N 78 7XT N13 H40 SING N N 79 7XT N16 H41 SING N N 80 7XT O28 H42 SING N N 81 7XT C22 H43 SING N N 82 7XT N23 H44 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7XT SMILES ACDLabs 12.01 "CC(C)C(C)(NC(=O)OCc1ccccc1)C(=O)NC(CC(C)(C)C)C(=O)NC(CC1CCNC1=O)CO" 7XT InChI InChI 1.03 "InChI=1S/C28H44N4O6/c1-18(2)28(6,32-26(37)38-17-19-10-8-7-9-11-19)25(36)31-22(15-27(3,4)5)24(35)30-21(16-33)14-20-12-13-29-23(20)34/h7-11,18,20-22,33H,12-17H2,1-6H3,(H,29,34)(H,30,35)(H,31,36)(H,32,37)/t20-,21-,22-,28-/m0/s1" 7XT InChIKey InChI 1.03 OSUADHICZNMIND-STFWXSJUSA-N 7XT SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@](C)(NC(=O)OCc1ccccc1)C(=O)N[C@@H](CC(C)(C)C)C(=O)N[C@H](CO)C[C@@H]2CCNC2=O" 7XT SMILES CACTVS 3.385 "CC(C)[C](C)(NC(=O)OCc1ccccc1)C(=O)N[CH](CC(C)(C)C)C(=O)N[CH](CO)C[CH]2CCNC2=O" 7XT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@](C)(C(=O)N[C@@H](CC(C)(C)C)C(=O)N[C@@H](C[C@@H]1CCNC1=O)CO)NC(=O)OCc2ccccc2" 7XT SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(C)(C(=O)NC(CC(C)(C)C)C(=O)NC(CC1CCNC1=O)CO)NC(=O)OCc2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7XT "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-3-methyl-L-isovalyl-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-4-methyl-L-leucinamide" 7XT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(phenylmethyl) ~{N}-[(2~{S})-1-[[(2~{S})-4,4-dimethyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-2,3-dimethyl-1-oxidanylidene-butan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7XT "Create component" 2021-08-23 RCSB 7XT "Initial release" 2022-07-20 RCSB 7XT "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id 7XT _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C27 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #