data_7YK # _chem_comp.id 7YK _chem_comp.name "N-[4-[(4R)-4-methyl-1-(oxan-4-yl)-6-oxidanylidene-4,5-dihydropyridazin-3-yl]phenyl]-1,3-dihydropyrrolo[3,4-c]pyridine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H27 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2021-09-15 _chem_comp.pdbx_modified_date 2022-08-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 433.503 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 7YK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7PPE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7YK CAJ C1 C 0 1 N N N 18.136 1.686 -2.876 -5.732 -1.209 1.407 CAJ 7YK 1 7YK CAK C2 C 0 1 N N N 19.397 0.932 -3.262 -6.705 -2.359 1.679 CAK 7YK 2 7YK OAL O1 O 0 1 N N N 20.049 1.799 -4.234 -6.544 -3.364 0.675 OAL 7YK 3 7YK CAM C3 C 0 1 N N N 19.303 2.025 -5.498 -6.820 -2.911 -0.652 CAM 7YK 4 7YK CAN C4 C 0 1 N N N 17.857 2.517 -5.251 -5.852 -1.783 -1.018 CAN 7YK 5 7YK CAI C5 C 0 1 N N N 17.192 1.763 -4.064 -5.990 -0.650 0.004 CAI 7YK 6 7YK NAC N1 N 0 1 N N N 15.915 2.442 -3.729 -5.014 0.400 -0.294 NAC 7YK 7 7YK NAB N2 N 0 1 N N N 15.933 3.441 -2.824 -3.649 0.101 -0.288 NAB 7YK 8 7YK CAD C6 C 0 1 N N N 14.782 2.116 -4.389 -5.439 1.646 -0.579 CAD 7YK 9 7YK OAE O2 O 0 1 N N N 14.836 1.218 -5.233 -6.620 1.917 -0.513 OAE 7YK 10 7YK CAF C7 C 0 1 N N N 13.575 2.815 -4.222 -4.439 2.702 -0.979 CAF 7YK 11 7YK CAG C8 C 0 1 N N R 13.564 3.786 -3.042 -3.141 2.487 -0.197 CAG 7YK 12 7YK CAH C9 C 0 1 N N N 12.891 2.980 -1.912 -3.349 2.905 1.260 CAH 7YK 13 7YK CAA C10 C 0 1 N N N 14.835 4.156 -2.500 -2.752 1.031 -0.256 CAA 7YK 14 7YK CAO C11 C 0 1 Y N N 14.993 5.130 -1.474 -1.325 0.661 -0.279 CAO 7YK 15 7YK CBF C12 C 0 1 Y N N 14.056 6.126 -1.224 -0.950 -0.684 -0.333 CBF 7YK 16 7YK CBE C13 C 0 1 Y N N 14.241 7.079 -0.219 0.385 -1.025 -0.354 CBE 7YK 17 7YK CAP C14 C 0 1 Y N N 16.119 5.111 -0.675 -0.343 1.656 -0.251 CAP 7YK 18 7YK CAQ C15 C 0 1 Y N N 16.302 6.039 0.339 0.989 1.307 -0.272 CAQ 7YK 19 7YK CAR C16 C 0 1 Y N N 15.399 7.086 0.548 1.358 -0.032 -0.320 CAR 7YK 20 7YK NAS N3 N 0 1 N N N 15.624 7.869 1.607 2.711 -0.382 -0.342 NAS 7YK 21 7YK CAT C17 C 0 1 N N N 14.720 8.771 2.124 3.612 0.367 0.325 CAT 7YK 22 7YK OBD O3 O 0 1 N N N 13.710 9.193 1.542 3.237 1.290 1.022 OBD 7YK 23 7YK NAU N4 N 0 1 N N N 15.061 9.246 3.329 4.927 0.094 0.218 NAU 7YK 24 7YK CAY C18 C 0 1 N N N 16.128 8.813 4.250 6.024 0.808 0.880 CAY 7YK 25 7YK CAX C19 C 0 1 Y N N 15.585 9.093 5.587 7.313 0.151 0.464 CAX 7YK 26 7YK CAZ C20 C 0 1 Y N N 15.997 8.687 6.799 8.637 0.408 0.782 CAZ 7YK 27 7YK CBA C21 C 0 1 Y N N 15.398 9.088 8.010 9.625 -0.388 0.232 CBA 7YK 28 7YK NBB N5 N 0 1 Y N N 14.243 9.914 7.959 9.317 -1.377 -0.584 NBB 7YK 29 7YK CBC C22 C 0 1 Y N N 13.848 10.299 6.662 8.067 -1.649 -0.907 CBC 7YK 30 7YK CAW C23 C 0 1 Y N N 14.507 9.929 5.522 7.027 -0.896 -0.394 CAW 7YK 31 7YK CAV C24 C 0 1 N N N 14.301 10.178 4.163 5.535 -0.978 -0.578 CAV 7YK 32 7YK H1 H1 H 0 1 N N N 18.404 2.704 -2.557 -5.883 -0.422 2.146 H1 7YK 33 7YK H2 H2 H 0 1 N N N 17.637 1.161 -2.048 -4.707 -1.576 1.470 H2 7YK 34 7YK H3 H3 H 0 1 N N N 19.148 -0.040 -3.712 -6.496 -2.788 2.659 H3 7YK 35 7YK H4 H4 H 0 1 N N N 20.042 0.775 -2.385 -7.727 -1.983 1.657 H4 7YK 36 7YK H5 H5 H 0 1 N N N 19.263 1.079 -6.058 -6.696 -3.738 -1.352 H5 7YK 37 7YK H6 H6 H 0 1 N N N 19.837 2.781 -6.092 -7.845 -2.542 -0.704 H6 7YK 38 7YK H7 H7 H 0 1 N N N 17.880 3.593 -5.023 -4.830 -2.162 -1.005 H7 7YK 39 7YK H8 H8 H 0 1 N N N 17.262 2.347 -6.160 -6.090 -1.407 -2.013 H8 7YK 40 7YK H9 H9 H 0 1 N N N 16.971 0.738 -4.397 -6.997 -0.236 -0.044 H9 7YK 41 7YK H10 H10 H 0 1 N N N 13.380 3.388 -5.140 -4.238 2.627 -2.047 H10 7YK 42 7YK H11 H11 H 0 1 N N N 12.771 2.080 -4.070 -4.841 3.690 -0.752 H11 7YK 43 7YK H12 H12 H 0 1 N N N 12.956 4.670 -3.285 -2.348 3.091 -0.638 H12 7YK 44 7YK H13 H13 H 0 1 N N N 12.833 3.598 -1.004 -4.143 2.303 1.701 H13 7YK 45 7YK H14 H14 H 0 1 N N N 11.877 2.690 -2.223 -2.425 2.751 1.817 H14 7YK 46 7YK H15 H15 H 0 1 N N N 13.483 2.077 -1.703 -3.627 3.958 1.299 H15 7YK 47 7YK H16 H16 H 0 1 N N N 13.159 6.164 -1.824 -1.706 -1.455 -0.359 H16 7YK 48 7YK H17 H17 H 0 1 N N N 13.475 7.818 -0.037 0.675 -2.064 -0.396 H17 7YK 49 7YK H18 H18 H 0 1 N N N 16.874 4.357 -0.843 -0.629 2.697 -0.214 H18 7YK 50 7YK H19 H19 H 0 1 N N N 17.164 5.951 0.984 1.748 2.075 -0.251 H19 7YK 51 7YK H20 H20 H 0 1 N N N 16.514 7.795 2.057 3.002 -1.165 -0.836 H20 7YK 52 7YK H21 H21 H 0 1 N N N 16.335 7.739 4.130 6.026 1.853 0.570 H21 7YK 53 7YK H22 H22 H 0 1 N N N 17.050 9.386 4.076 5.908 0.743 1.962 H22 7YK 54 7YK H23 H23 H 0 1 N N N 16.839 8.012 6.849 8.893 1.218 1.449 H23 7YK 55 7YK H24 H24 H 0 1 N N N 15.809 8.774 8.958 10.660 -0.196 0.472 H24 7YK 56 7YK H25 H25 H 0 1 N N N 12.973 10.924 6.562 7.854 -2.468 -1.578 H25 7YK 57 7YK H26 H26 H 0 1 N N N 14.621 11.205 3.935 5.171 -1.946 -0.233 H26 7YK 58 7YK H27 H27 H 0 1 N N N 13.230 10.069 3.937 5.286 -0.844 -1.631 H27 7YK 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7YK CAM CAN SING N N 1 7YK CAM OAL SING N N 2 7YK CAN CAI SING N N 3 7YK OAE CAD DOUB N N 4 7YK CAD CAF SING N N 5 7YK CAD NAC SING N N 6 7YK OAL CAK SING N N 7 7YK CAF CAG SING N N 8 7YK CAI NAC SING N N 9 7YK CAI CAJ SING N N 10 7YK NAC NAB SING N N 11 7YK CAK CAJ SING N N 12 7YK CAG CAA SING N N 13 7YK CAG CAH SING N N 14 7YK NAB CAA DOUB N N 15 7YK CAA CAO SING N N 16 7YK CAO CBF DOUB Y N 17 7YK CAO CAP SING Y N 18 7YK CBF CBE SING Y N 19 7YK CAP CAQ DOUB Y N 20 7YK CBE CAR DOUB Y N 21 7YK CAQ CAR SING Y N 22 7YK CAR NAS SING N N 23 7YK OBD CAT DOUB N N 24 7YK NAS CAT SING N N 25 7YK CAT NAU SING N N 26 7YK NAU CAV SING N N 27 7YK NAU CAY SING N N 28 7YK CAV CAW SING N N 29 7YK CAY CAX SING N N 30 7YK CAW CAX DOUB Y N 31 7YK CAW CBC SING Y N 32 7YK CAX CAZ SING Y N 33 7YK CBC NBB DOUB Y N 34 7YK CAZ CBA DOUB Y N 35 7YK NBB CBA SING Y N 36 7YK CAJ H1 SING N N 37 7YK CAJ H2 SING N N 38 7YK CAK H3 SING N N 39 7YK CAK H4 SING N N 40 7YK CAM H5 SING N N 41 7YK CAM H6 SING N N 42 7YK CAN H7 SING N N 43 7YK CAN H8 SING N N 44 7YK CAI H9 SING N N 45 7YK CAF H10 SING N N 46 7YK CAF H11 SING N N 47 7YK CAG H12 SING N N 48 7YK CAH H13 SING N N 49 7YK CAH H14 SING N N 50 7YK CAH H15 SING N N 51 7YK CBF H16 SING N N 52 7YK CBE H17 SING N N 53 7YK CAP H18 SING N N 54 7YK CAQ H19 SING N N 55 7YK NAS H20 SING N N 56 7YK CAY H21 SING N N 57 7YK CAY H22 SING N N 58 7YK CAZ H23 SING N N 59 7YK CBA H24 SING N N 60 7YK CBC H25 SING N N 61 7YK CAV H26 SING N N 62 7YK CAV H27 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7YK InChI InChI 1.06 "InChI=1S/C24H27N5O3/c1-16-12-22(30)29(21-7-10-32-11-8-21)27-23(16)17-2-4-20(5-3-17)26-24(31)28-14-18-6-9-25-13-19(18)15-28/h2-6,9,13,16,21H,7-8,10-12,14-15H2,1H3,(H,26,31)/t16-/m1/s1" 7YK InChIKey InChI 1.06 YFHOMYWNYOHHDS-MRXNPFEDSA-N 7YK SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1CC(=O)N(N=C1c2ccc(NC(=O)N3Cc4ccncc4C3)cc2)C5CCOCC5" 7YK SMILES CACTVS 3.385 "C[CH]1CC(=O)N(N=C1c2ccc(NC(=O)N3Cc4ccncc4C3)cc2)C5CCOCC5" 7YK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1CC(=O)N(N=C1c2ccc(cc2)NC(=O)N3Cc4ccncc4C3)C5CCOCC5" 7YK SMILES "OpenEye OEToolkits" 2.0.7 "CC1CC(=O)N(N=C1c2ccc(cc2)NC(=O)N3Cc4ccncc4C3)C5CCOCC5" # _pdbx_chem_comp_identifier.comp_id 7YK _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[4-[(4~{R})-4-methyl-1-(oxan-4-yl)-6-oxidanylidene-4,5-dihydropyridazin-3-yl]phenyl]-1,3-dihydropyrrolo[3,4-c]pyridine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7YK "Create component" 2021-09-15 PDBE 7YK "Initial release" 2022-06-15 RCSB 7YK "Modify descriptor" 2022-08-22 RCSB #