data_7YL # _chem_comp.id 7YL _chem_comp.name "(2R)-5-oxidanylidene-1,2-dihydropyrrole-2-carboxylic acid" _chem_comp.type peptide-like _chem_comp.pdbx_type ATOMP _chem_comp.formula "C5 H5 N O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-14 _chem_comp.pdbx_modified_date 2018-07-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 127.098 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5WXS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 7YL C C9 C 0 1 N N N 4.473 -31.833 -26.820 1.597 -0.256 -0.003 C5 7YL 1 7YL O O3 O 0 1 N N N 3.766 -32.767 -26.571 1.581 -1.357 -0.500 O2 7YL 2 7YL CA C10 C 0 1 N N R 4.956 -31.651 -28.209 0.373 0.269 0.703 C4 7YL 3 7YL N N6 N 0 1 N N N 3.901 -31.278 -29.115 -0.713 -0.717 0.636 N1 7YL 4 7YL CB C11 C 0 1 N N N 5.345 -33.010 -28.752 -0.145 1.503 0.001 C3 7YL 5 7YL CG C12 C 0 1 N N N 4.491 -33.337 -29.953 -1.379 1.228 -0.409 C2 7YL 6 7YL CD C13 C 0 1 N N N 3.565 -32.194 -29.978 -1.738 -0.142 -0.020 C1 7YL 7 7YL OE O4 O 0 1 N N N 2.613 -32.172 -30.711 -2.803 -0.678 -0.258 O1 7YL 8 7YL HA H17 H 0 1 N N N 5.805 -30.952 -28.252 0.609 0.499 1.742 H17 7YL 9 7YL H H18 H 0 1 N N N 3.459 -30.382 -29.084 -0.695 -1.617 0.998 H18 7YL 10 7YL HB H19 H 0 1 N N N 6.115 -33.647 -28.343 0.387 2.432 -0.140 H19 7YL 11 7YL HG H20 H 0 1 N N N 4.545 -34.186 -30.618 -2.021 1.911 -0.946 H20 7YL 12 7YL OXT OXT O 0 1 N Y N 4.848 -30.960 -25.912 2.705 0.498 -0.074 OXT 7YL 13 7YL HXT HXT H 0 1 N Y N 4.474 -31.196 -25.071 3.466 0.117 -0.534 HXT 7YL 14 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 7YL OE CD DOUB N N 1 7YL CD CG SING N N 2 7YL CD N SING N N 3 7YL CG CB DOUB N N 4 7YL N CA SING N N 5 7YL CB CA SING N N 6 7YL CA C SING N N 7 7YL C O DOUB N N 8 7YL CA HA SING N N 9 7YL N H SING N N 10 7YL CB HB SING N N 11 7YL CG HG SING N N 12 7YL C OXT SING N N 13 7YL OXT HXT SING N N 14 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 7YL InChI InChI 1.03 "InChI=1S/C5H5NO3/c7-4-2-1-3(6-4)5(8)9/h1-3H,(H,6,7)(H,8,9)/t3-/m1/s1" 7YL InChIKey InChI 1.03 BAQXAKWDKIIPEC-GSVOUGTGSA-N 7YL SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H]1NC(=O)C=C1" 7YL SMILES CACTVS 3.385 "OC(=O)[CH]1NC(=O)C=C1" 7YL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1=CC(=O)N[C@H]1C(=O)O" 7YL SMILES "OpenEye OEToolkits" 2.0.6 "C1=CC(=O)NC1C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 7YL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{R})-5-oxidanylidene-1,2-dihydropyrrole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 7YL "Create component" 2017-02-14 PDBJ 7YL "Initial release" 2018-07-11 RCSB #