data_840 # _chem_comp.id 840 _chem_comp.name "Platensimycin A1" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H25 N O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;2,4-dihydroxy-3-({3-[(1aR,2R,3R,3aS,7S,7aS,7bR)-3-hydroxy-2,7-dimethyl-6-oxo-2,3,7,7a-tetrahydro-6H-2,7b-epoxy-1a,3a-me thanocyclopropa[a]naphthalen-7(1H)-yl]propanoyl}amino)benzoic acid ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-07-10 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 455.457 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 840 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3I8P _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 840 C1 C1 C 0 1 N N N -4.961 68.513 68.323 -1.307 1.110 0.135 C1 840 1 840 C2 C2 C 0 1 N N N -4.075 69.411 69.130 -0.013 1.788 -0.233 C2 840 2 840 C3 C3 C 0 1 N N N -2.671 68.818 69.143 1.161 0.872 0.119 C3 840 3 840 C4 C4 C 0 1 N N S -1.742 69.709 70.002 2.472 1.559 -0.254 C4 840 4 840 C5 C5 C 0 1 N N N -1.966 69.685 71.535 2.523 1.816 -1.750 C5 840 5 840 C6 C6 C 0 1 N N N -1.387 70.803 72.331 3.237 0.917 -2.655 C6 840 6 840 C7 C7 C 0 1 N N N -0.490 71.683 71.856 3.955 -0.116 -2.193 C7 840 7 840 C8 C8 C 0 1 N N S 0.084 71.648 70.450 3.976 -0.430 -0.767 C8 840 8 840 C9 C9 C 0 1 N N S -0.628 70.634 69.416 3.706 0.792 0.142 C9 840 9 840 C10 C10 C 0 1 N N R -0.440 71.121 67.899 3.735 0.157 1.536 C10 840 10 840 C11 C11 C 0 1 N N N 0.900 71.224 67.266 5.017 0.087 2.360 C11 840 11 840 C12 C12 C 0 1 N N R 0.736 71.999 68.566 4.746 -1.024 1.349 C12 840 12 840 C13 C13 C 0 1 N N N 1.484 72.201 69.845 5.309 -0.886 -0.116 C13 840 13 840 C14 C14 C 0 1 N N R -0.667 73.071 70.043 3.061 -1.602 -0.359 C14 840 14 840 C15 C15 C 0 1 N N R -0.458 73.003 68.594 3.438 -1.822 1.139 C15 840 15 840 O16 O16 O 0 1 N N N -1.298 72.278 67.600 2.746 -0.823 1.918 O16 840 16 840 C17 C17 C 0 1 N N N -0.103 74.349 67.920 3.397 -3.266 1.642 C17 840 17 840 C18 C18 C 0 1 N N N -0.789 68.494 70.200 2.499 2.935 0.456 C18 840 18 840 O19 O19 O 0 1 N N N -2.668 68.791 72.037 1.954 2.794 -2.204 O19 840 19 840 O20 O20 O 0 1 N N N -5.465 67.509 68.825 -1.292 0.002 0.630 O20 840 20 840 C21 C21 C 0 1 N N N -5.791 64.833 64.240 -5.416 -2.156 -0.670 C21 840 21 840 C22 C22 C 0 1 Y N N -6.243 66.190 64.688 -5.145 -0.832 -0.089 C22 840 22 840 C23 C23 C 0 1 Y N N -5.512 66.880 65.676 -3.936 -0.176 -0.364 C23 840 23 840 C24 C24 C 0 1 Y N N -5.935 68.164 66.065 -3.689 1.074 0.189 C24 840 24 840 C25 C25 C 0 1 Y N N -7.039 68.745 65.507 -4.641 1.670 1.011 C25 840 25 840 C26 C26 C 0 1 Y N N -7.777 68.063 64.527 -5.839 1.018 1.282 C26 840 26 840 C27 C27 C 0 1 Y N N -7.376 66.807 64.130 -6.096 -0.219 0.735 C27 840 27 840 N28 N28 N 0 1 N N N -5.156 68.859 67.066 -2.481 1.736 -0.081 N28 840 28 840 O30 O30 O 0 1 N N N -7.428 69.974 65.872 -4.399 2.892 1.552 O30 840 29 840 O31 O31 O 0 1 N N N -4.395 66.404 66.295 -3.010 -0.762 -1.166 O31 840 30 840 O32 O32 O 0 1 N N N -4.748 64.355 64.678 -6.579 -2.784 -0.404 O32 840 31 840 O33 O33 O 0 1 N N N -6.572 64.316 63.355 -4.591 -2.685 -1.389 O33 840 32 840 O34 O34 O 0 1 N N N 0.008 74.125 70.621 3.391 -2.774 -1.123 O34 840 33 840 H2 H2 H 0 1 N N N -4.052 70.414 68.680 -0.003 1.997 -1.303 H2 840 34 840 H2A H2A H 0 1 N N N -4.458 69.486 70.159 0.078 2.723 0.320 H2A 840 35 840 H3 H3 H 0 1 N N N -2.705 67.805 69.570 1.152 0.664 1.189 H3 840 36 840 H3A H3A H 0 1 N N N -2.284 68.770 68.114 1.071 -0.063 -0.435 H3A 840 37 840 H6 H6 H 0 1 N N N -1.709 70.913 73.356 3.186 1.088 -3.724 H6 840 38 840 H7 H7 H 0 1 N N N -0.155 72.468 72.518 4.501 -0.743 -2.885 H7 840 39 840 H9 H9 H 0 1 N N N -0.180 69.650 69.212 4.584 1.485 0.075 H9 840 40 840 H11 H11 H 0 1 N N N 1.610 70.415 67.041 5.800 0.805 2.119 H11 840 41 840 H11A H11A H 0 0 N N N 1.154 71.613 66.269 4.913 -0.159 3.417 H11A 840 42 840 H13 H13 H 0 1 N N N 1.854 73.199 70.122 5.646 -1.837 -0.520 H13 840 43 840 H13A H13A H 0 0 N N N 2.423 71.660 70.032 6.070 -0.112 -0.191 H13A 840 44 840 H14 H14 H 0 1 N N N -1.713 73.205 70.356 2.009 -1.385 -0.483 H14 840 45 840 H17 H17 H 0 1 N N N -0.972 75.022 67.964 3.570 -3.281 2.718 H17 840 46 840 H17A H17A H 0 0 N N N 0.745 74.811 68.447 2.420 -3.698 1.426 H17A 840 47 840 H17B H17B H 0 0 N N N 0.171 74.172 66.869 4.170 -3.848 1.141 H17B 840 48 840 H18 H18 H 0 1 N N N 0.065 68.795 70.824 2.440 2.788 1.534 H18 840 49 840 H18A H18A H 0 0 N N N -1.334 67.677 70.695 3.426 3.453 0.209 H18A 840 50 840 H18B H18B H 0 0 N N N -0.425 68.151 69.221 1.650 3.531 0.123 H18B 840 51 840 H26 H26 H 0 1 N N N -8.652 68.519 64.088 -6.573 1.486 1.921 H26 840 52 840 H27 H27 H 0 1 N N N -7.944 66.285 63.374 -7.030 -0.718 0.945 H27 840 53 840 HN28 HN28 H 0 0 N N N -4.712 69.704 66.769 -2.491 2.643 -0.423 HN28 840 54 840 HO30 HO30 H 0 0 N N N -8.207 70.217 65.386 -4.591 3.630 0.957 HO30 840 55 840 HO31 HO31 H 0 0 N N N -4.431 66.616 67.220 -3.111 -0.547 -2.104 HO31 840 56 840 HO32 HO32 H 0 0 N N N -4.584 63.517 64.262 -6.712 -3.652 -0.808 HO32 840 57 840 HO34 HO34 H 0 0 N N N -0.420 74.941 70.389 2.849 -3.547 -0.912 HO34 840 58 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 840 N28 C1 SING N N 1 840 C1 O20 DOUB N N 2 840 C1 C2 SING N N 3 840 C2 C3 SING N N 4 840 C2 H2 SING N N 5 840 C2 H2A SING N N 6 840 C3 C4 SING N N 7 840 C3 H3 SING N N 8 840 C3 H3A SING N N 9 840 C9 C4 SING N N 10 840 C4 C18 SING N N 11 840 C4 C5 SING N N 12 840 C5 O19 DOUB N N 13 840 C5 C6 SING N N 14 840 C7 C6 DOUB N N 15 840 C6 H6 SING N N 16 840 C8 C7 SING N N 17 840 C7 H7 SING N N 18 840 C9 C8 SING N N 19 840 C13 C8 SING N N 20 840 C14 C8 SING N N 21 840 C10 C9 SING N N 22 840 C9 H9 SING N N 23 840 C11 C10 SING N N 24 840 O16 C10 SING N N 25 840 C10 C12 SING N N 26 840 C11 C12 SING N N 27 840 C11 H11 SING N N 28 840 C11 H11A SING N N 29 840 C12 C15 SING N N 30 840 C12 C13 SING N N 31 840 C13 H13 SING N N 32 840 C13 H13A SING N N 33 840 C15 C14 SING N N 34 840 C14 O34 SING N N 35 840 C14 H14 SING N N 36 840 O16 C15 SING N N 37 840 C17 C15 SING N N 38 840 C17 H17 SING N N 39 840 C17 H17A SING N N 40 840 C17 H17B SING N N 41 840 C18 H18 SING N N 42 840 C18 H18A SING N N 43 840 C18 H18B SING N N 44 840 O33 C21 DOUB N N 45 840 C21 O32 SING N N 46 840 C21 C22 SING N N 47 840 C27 C22 DOUB Y N 48 840 C22 C23 SING Y N 49 840 C23 C24 DOUB Y N 50 840 C23 O31 SING N N 51 840 C25 C24 SING Y N 52 840 C24 N28 SING N N 53 840 C26 C25 DOUB Y N 54 840 C25 O30 SING N N 55 840 C27 C26 SING Y N 56 840 C26 H26 SING N N 57 840 C27 H27 SING N N 58 840 N28 HN28 SING N N 59 840 O30 HO30 SING N N 60 840 O31 HO31 SING N N 61 840 O32 HO32 SING N N 62 840 O34 HO34 SING N N 63 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 840 SMILES ACDLabs 11.02 "O=C(O)c1c(O)c(c(O)cc1)NC(=O)CCC5(C(=O)C=CC43CC26C(OC2(C3O)C)(C45)C6)C" 840 SMILES_CANONICAL CACTVS 3.352 "C[C@]1(CCC(=O)Nc2c(O)ccc(C(O)=O)c2O)[C@@H]3[C@]4(C[C@@]56C[C@@]35O[C@@]6(C)[C@@H]4O)C=CC1=O" 840 SMILES CACTVS 3.352 "C[C]1(CCC(=O)Nc2c(O)ccc(C(O)=O)c2O)[CH]3[C]4(C[C]56C[C]35O[C]6(C)[CH]4O)C=CC1=O" 840 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[C@@]1([C@H]2[C@@]34C[C@]35CC2(C=CC1=O)[C@H]([C@@]5(O4)C)O)CCC(=O)Nc6c(ccc(c6O)C(=O)O)O" 840 SMILES "OpenEye OEToolkits" 1.7.0 "CC1(C2C3(CC45C2(C4)OC5(C3O)C)C=CC1=O)CCC(=O)Nc6c(ccc(c6O)C(=O)O)O" 840 InChI InChI 1.03 "InChI=1S/C24H25NO8/c1-20(7-6-14(28)25-15-12(26)4-3-11(16(15)29)17(30)31)13(27)5-8-22-9-23-10-24(23,18(20)22)33-21(23,2)19(22)32/h3-5,8,18-19,26,29,32H,6-7,9-10H2,1-2H3,(H,25,28)(H,30,31)/t18-,19+,20-,21+,22-,23+,24-/m1/s1" 840 InChIKey InChI 1.03 TUHIUIGYYSZKCN-ACYPNERUSA-N # _pdbx_chem_comp_identifier.comp_id 840 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 11.02 _pdbx_chem_comp_identifier.identifier "2,4-dihydroxy-3-({3-[(1aR,2R,3R,3aS,7S,7aS,7bR)-3-hydroxy-2,7-dimethyl-6-oxo-2,3,7,7a-tetrahydro-6H-2,7b-epoxy-1a,3a-methanocyclopropa[a]naphthalen-7(1H)-yl]propanoyl}amino)benzoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 840 "Create component" 2009-07-10 RCSB 840 "Modify aromatic_flag" 2011-06-04 RCSB 840 "Modify descriptor" 2011-06-04 RCSB 840 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id 840 _pdbx_chem_comp_synonyms.name "2,4-dihydroxy-3-({3-[(1aR,2R,3R,3aS,7S,7aS,7bR)-3-hydroxy-2,7-dimethyl-6-oxo-2,3,7,7a-tetrahydro-6H-2,7b-epoxy-1a,3a-methanocyclopropa[a]naphthalen-7(1H)-yl]propanoyl}amino)benzoic acid" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##