data_852
#
_chem_comp.id 852
_chem_comp.name "2-{4-[2-ACETYLAMINO-2-(1-BIPHENYL-4-YLMETHYL-2-OXO-AZEPAN-3-YLCARBAMOYL)-ETHYL]-2-CARBOXY-PHENYL}-MALONIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C34 H35 N3 O9"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms RU85052
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2003-06-20
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 629.656
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 852
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1O44
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
852 C1 C1 C 0 1 Y N N 19.238 25.641 20.078 -0.685 0.052 -1.412 C1 852 1
852 C2 C2 C 0 1 Y N N 17.893 25.338 19.792 0.184 0.859 -2.124 C2 852 2
852 C3 C3 C 0 1 Y N N 17.174 26.197 18.959 0.333 0.690 -3.489 C3 852 3
852 C4 C4 C 0 1 Y N N 17.780 27.379 18.501 -0.384 -0.284 -4.150 C4 852 4
852 C5 C5 C 0 1 Y N N 19.147 27.735 18.842 -1.263 -1.102 -3.438 C5 852 5
852 C6 C6 C 0 1 Y N N 19.908 26.810 19.598 -1.406 -0.929 -2.059 C6 852 6
852 C7 C7 C 0 1 N N N 20.013 24.763 21.007 -0.841 0.243 0.074 C7 852 7
852 C8 C8 C 0 1 N N S 19.682 25.231 22.418 -1.960 1.251 0.344 C8 852 8
852 C9 C9 C 0 1 N N N 20.439 24.317 23.395 -2.116 1.442 1.830 C9 852 9
852 N10 N10 N 0 1 N N N 19.687 23.240 23.751 -2.963 0.657 2.525 N10 852 10
852 O11 O11 O 0 1 N N N 21.605 24.551 23.776 -1.479 2.302 2.401 O11 852 11
852 N12 N12 N 0 1 N N N 20.128 26.603 22.604 -1.623 2.533 -0.280 N12 852 12
852 C13 C13 C 0 1 N N N 19.327 27.501 23.164 -0.501 3.185 0.083 C13 852 13
852 O14 O14 O 0 1 N N N 18.231 27.244 23.643 0.228 2.712 0.928 O14 852 14
852 C15 C15 C 0 1 N N N 19.866 28.937 23.053 -0.155 4.504 -0.558 C15 852 15
852 C16 C16 C 0 1 N N S 20.277 22.246 24.606 -3.115 0.843 3.970 C16 852 16
852 C17 C17 C 0 1 N N N 21.342 21.486 23.786 -1.930 0.232 4.689 C17 852 17
852 N18 N18 N 0 1 N N N 22.152 20.667 24.557 -1.534 -1.009 4.389 N18 852 18
852 O19 O19 O 0 1 N N N 21.401 21.620 22.546 -1.343 0.864 5.541 O19 852 19
852 C20 C20 C 0 1 N N N 21.998 20.479 26.008 -2.234 -1.786 3.353 C20 852 20
852 C21 C21 C 0 1 N N N 20.735 19.659 26.195 -3.600 -2.208 3.897 C21 852 21
852 C22 C22 C 0 1 N N N 23.131 19.821 23.785 -0.393 -1.598 5.095 C22 852 22
852 C23 C23 C 0 1 Y N N 22.526 18.486 23.353 0.876 -1.277 4.351 C23 852 23
852 C24 C24 C 0 1 N N N 19.523 20.542 26.341 -4.636 -1.126 3.655 C24 852 24
852 C25 C25 C 0 1 N N N 19.181 21.293 25.063 -4.390 0.144 4.448 C25 852 25
852 C26 C26 C 0 1 Y N N 21.344 18.432 22.519 1.339 -2.139 3.373 C26 852 26
852 C27 C27 C 0 1 Y N N 20.705 17.190 22.262 2.499 -1.848 2.685 C27 852 27
852 C28 C28 C 0 1 Y N N 21.310 16.044 22.851 3.211 -0.688 2.985 C28 852 28
852 C29 C29 C 0 1 Y N N 22.475 16.061 23.640 2.744 0.173 3.975 C29 852 29
852 C30 C30 C 0 1 Y N N 23.084 17.298 23.902 1.579 -0.124 4.653 C30 852 30
852 C31 C31 C 0 1 Y N N 20.649 14.726 22.615 4.463 -0.372 2.253 C31 852 31
852 C32 C32 C 0 1 Y N N 21.456 13.542 22.467 4.737 0.938 1.870 C32 852 32
852 C33 C33 C 0 1 Y N N 20.799 12.311 22.136 5.905 1.227 1.195 C33 852 33
852 C34 C34 C 0 1 Y N N 19.413 12.283 21.975 6.797 0.216 0.886 C34 852 34
852 C35 C35 C 0 1 Y N N 18.616 13.423 22.137 6.527 -1.088 1.258 C35 852 35
852 C36 C36 C 0 1 Y N N 19.225 14.658 22.480 5.365 -1.387 1.940 C36 852 36
852 C37 C37 C 0 1 N N N 19.835 29.042 18.452 -2.036 -2.148 -4.138 C37 852 37
852 O38 O38 O 0 1 N N N 19.534 30.212 19.105 -2.229 -3.347 -3.556 O38 852 38
852 O39 O39 O 0 1 N N N 20.626 29.043 17.573 -2.498 -1.927 -5.240 O39 852 39
852 C40 C40 C 0 1 N N N 16.905 28.234 17.628 -0.220 -0.466 -5.637 C40 852 40
852 C41 C41 C 0 1 N N N 17.230 28.495 16.158 1.237 -0.672 -5.960 C41 852 41
852 O42 O42 O 0 1 N N N 17.365 27.356 15.519 1.623 -0.856 -7.232 O42 852 42
852 O43 O43 O 0 1 N N N 17.420 29.555 15.668 2.058 -0.670 -5.073 O43 852 43
852 C76 C76 C 0 1 N N N 15.471 28.571 17.994 -0.725 0.759 -6.352 C76 852 44
852 O78 O78 O 0 1 N N N 14.769 28.732 17.067 -0.678 0.822 -7.692 O78 852 45
852 O79 O79 O 0 1 N N N 15.196 28.844 19.245 -1.172 1.686 -5.720 O79 852 46
852 H2 H2 H 0 1 N N N 17.409 24.440 20.214 0.749 1.623 -1.612 H2 852 47
852 H3 H3 H 0 1 N N N 16.140 25.945 18.666 1.014 1.324 -4.039 H3 852 48
852 H6 H6 H 0 1 N N N 20.976 26.992 19.804 -2.084 -1.559 -1.502 H6 852 49
852 H71 1H7 H 0 1 N N N 19.825 23.675 20.846 0.092 0.616 0.492 H71 852 50
852 H72 2H7 H 0 1 N N N 21.106 24.748 20.791 -1.092 -0.710 0.538 H72 852 51
852 H8 H8 H 0 1 N N N 18.582 25.186 22.594 -2.894 0.878 -0.074 H8 852 52
852 H10 H10 H 0 1 N N N 18.732 23.181 23.396 -3.472 -0.030 2.068 H10 852 53
852 H12 H12 H 0 1 N N N 21.046 26.952 22.328 -2.207 2.912 -0.955 H12 852 54
852 H151 1H15 H 0 0 N N N 19.193 29.691 23.523 0.779 4.877 -0.139 H151 852 55
852 H152 2H15 H 0 0 N N N 20.897 29.008 23.469 -0.042 4.366 -1.633 H152 852 56
852 H153 3H15 H 0 0 N N N 20.080 29.201 21.991 -0.951 5.222 -0.365 H153 852 57
852 H16 H16 H 0 1 N N N 20.754 22.708 25.501 -3.172 1.907 4.199 H16 852 58
852 H201 1H20 H 0 0 N N N 22.894 20.030 26.495 -1.650 -2.672 3.104 H201 852 59
852 H202 2H20 H 0 0 N N N 21.995 21.435 26.581 -2.368 -1.172 2.463 H202 852 60
852 H211 1H21 H 0 0 N N N 20.603 18.917 25.372 -3.518 -2.394 4.968 H211 852 61
852 H212 2H21 H 0 0 N N N 20.830 18.951 27.051 -3.916 -3.125 3.398 H212 852 62
852 H221 1H22 H 0 0 N N N 23.544 20.377 22.911 -0.519 -2.679 5.150 H221 852 63
852 H222 2H22 H 0 0 N N N 24.073 19.669 24.360 -0.338 -1.186 6.103 H222 852 64
852 H241 1H24 H 0 0 N N N 18.646 19.958 26.707 -5.618 -1.518 3.922 H241 852 65
852 H242 2H24 H 0 0 N N N 19.643 21.246 27.197 -4.640 -0.879 2.593 H242 852 66
852 H251 1H25 H 0 0 N N N 18.209 21.830 25.169 -4.289 -0.104 5.504 H251 852 67
852 H252 2H25 H 0 0 N N N 18.911 20.581 24.247 -5.238 0.818 4.318 H252 852 68
852 H26 H26 H 0 1 N N N 20.924 19.349 22.073 0.786 -3.037 3.141 H26 852 69
852 H27 H27 H 0 1 N N N 19.794 17.119 21.643 2.857 -2.519 1.919 H27 852 70
852 H29 H29 H 0 1 N N N 22.900 15.126 24.043 3.292 1.073 4.211 H29 852 71
852 H30 H30 H 0 1 N N N 23.989 17.336 24.531 1.216 0.542 5.420 H30 852 72
852 H32 H32 H 0 1 N N N 22.549 13.577 22.603 4.041 1.728 2.110 H32 852 73
852 H33 H33 H 0 1 N N N 21.366 11.374 22.003 6.122 2.244 0.902 H33 852 74
852 H34 H34 H 0 1 N N N 18.930 11.326 21.710 7.708 0.446 0.354 H34 852 75
852 H35 H35 H 0 1 N N N 17.524 13.349 21.996 7.227 -1.874 1.015 H35 852 76
852 H36 H36 H 0 1 N N N 18.600 15.552 22.639 5.155 -2.406 2.230 H36 852 77
852 H38 H38 H 0 1 N N N 19.961 31.024 18.862 -2.735 -4.032 -4.014 H38 852 78
852 H40 H40 H 0 1 N N N 17.523 28.960 18.205 -0.790 -1.337 -5.961 H40 852 79
852 H42 H42 H 0 1 N N N 17.567 27.518 14.605 2.558 -0.988 -7.439 H42 852 80
852 H78 H78 H 0 1 N N N 13.871 28.942 17.296 -1.002 1.609 -8.151 H78 852 81
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
852 C1 C2 DOUB Y N 1
852 C1 C6 SING Y N 2
852 C1 C7 SING N N 3
852 C2 C3 SING Y N 4
852 C2 H2 SING N N 5
852 C3 C4 DOUB Y N 6
852 C3 H3 SING N N 7
852 C4 C5 SING Y N 8
852 C4 C40 SING N N 9
852 C5 C6 DOUB Y N 10
852 C5 C37 SING N N 11
852 C6 H6 SING N N 12
852 C7 C8 SING N N 13
852 C7 H71 SING N N 14
852 C7 H72 SING N N 15
852 C8 C9 SING N N 16
852 C8 N12 SING N N 17
852 C8 H8 SING N N 18
852 C9 N10 SING N N 19
852 C9 O11 DOUB N N 20
852 N10 C16 SING N N 21
852 N10 H10 SING N N 22
852 N12 C13 SING N N 23
852 N12 H12 SING N N 24
852 C13 O14 DOUB N N 25
852 C13 C15 SING N N 26
852 C15 H151 SING N N 27
852 C15 H152 SING N N 28
852 C15 H153 SING N N 29
852 C16 C17 SING N N 30
852 C16 C25 SING N N 31
852 C16 H16 SING N N 32
852 C17 N18 SING N N 33
852 C17 O19 DOUB N N 34
852 N18 C20 SING N N 35
852 N18 C22 SING N N 36
852 C20 C21 SING N N 37
852 C20 H201 SING N N 38
852 C20 H202 SING N N 39
852 C21 C24 SING N N 40
852 C21 H211 SING N N 41
852 C21 H212 SING N N 42
852 C22 C23 SING N N 43
852 C22 H221 SING N N 44
852 C22 H222 SING N N 45
852 C23 C26 SING Y N 46
852 C23 C30 DOUB Y N 47
852 C24 C25 SING N N 48
852 C24 H241 SING N N 49
852 C24 H242 SING N N 50
852 C25 H251 SING N N 51
852 C25 H252 SING N N 52
852 C26 C27 DOUB Y N 53
852 C26 H26 SING N N 54
852 C27 C28 SING Y N 55
852 C27 H27 SING N N 56
852 C28 C29 DOUB Y N 57
852 C28 C31 SING Y N 58
852 C29 C30 SING Y N 59
852 C29 H29 SING N N 60
852 C30 H30 SING N N 61
852 C31 C32 SING Y N 62
852 C31 C36 DOUB Y N 63
852 C32 C33 DOUB Y N 64
852 C32 H32 SING N N 65
852 C33 C34 SING Y N 66
852 C33 H33 SING N N 67
852 C34 C35 DOUB Y N 68
852 C34 H34 SING N N 69
852 C35 C36 SING Y N 70
852 C35 H35 SING N N 71
852 C36 H36 SING N N 72
852 C37 O38 SING N N 73
852 C37 O39 DOUB N N 74
852 O38 H38 SING N N 75
852 C40 C41 SING N N 76
852 C40 C76 SING N N 77
852 C40 H40 SING N N 78
852 C41 O42 SING N N 79
852 C41 O43 DOUB N N 80
852 O42 H42 SING N N 81
852 C76 O78 SING N N 82
852 C76 O79 DOUB N N 83
852 O78 H78 SING N N 84
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
852 SMILES ACDLabs 10.04 "O=C(O)C(C(=O)O)c1c(C(=O)O)cc(cc1)CC(NC(=O)C)C(=O)NC4C(=O)N(Cc3ccc(c2ccccc2)cc3)CCCC4"
852 SMILES_CANONICAL CACTVS 3.341 "CC(=O)N[C@@H](Cc1ccc(C(C(O)=O)C(O)=O)c(c1)C(O)=O)C(=O)N[C@H]2CCCCN(Cc3ccc(cc3)c4ccccc4)C2=O"
852 SMILES CACTVS 3.341 "CC(=O)N[CH](Cc1ccc(C(C(O)=O)C(O)=O)c(c1)C(O)=O)C(=O)N[CH]2CCCCN(Cc3ccc(cc3)c4ccccc4)C2=O"
852 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=O)N[C@@H](Cc1ccc(c(c1)C(=O)O)C(C(=O)O)C(=O)O)C(=O)N[C@H]2CCCCN(C2=O)Cc3ccc(cc3)c4ccccc4"
852 SMILES "OpenEye OEToolkits" 1.5.0 "CC(=O)NC(Cc1ccc(c(c1)C(=O)O)C(C(=O)O)C(=O)O)C(=O)NC2CCCCN(C2=O)Cc3ccc(cc3)c4ccccc4"
852 InChI InChI 1.03 "InChI=1S/C34H35N3O9/c1-20(38)35-28(18-22-12-15-25(26(17-22)32(41)42)29(33(43)44)34(45)46)30(39)36-27-9-5-6-16-37(31(27)40)19-21-10-13-24(14-11-21)23-7-3-2-4-8-23/h2-4,7-8,10-15,17,27-29H,5-6,9,16,18-19H2,1H3,(H,35,38)(H,36,39)(H,41,42)(H,43,44)(H,45,46)/t27-,28-/m0/s1"
852 InChIKey InChI 1.03 CGOGPQNYHFBUEF-NSOVKSMOSA-N
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
852 "SYSTEMATIC NAME" ACDLabs 10.04 "{4-[(2S)-2-(acetylamino)-3-{[(3S)-1-(biphenyl-4-ylmethyl)-2-oxoazepan-3-yl]amino}-3-oxopropyl]-2-carboxyphenyl}propanedioic acid"
852 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[4-[(2S)-2-acetamido-3-oxo-3-[[(3S)-2-oxo-1-[(4-phenylphenyl)methyl]azepan-3-yl]amino]propyl]-2-carboxy-phenyl]propanedioic acid"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
852 "Create component" 2003-06-20 RCSB
852 "Modify aromatic_flag" 2011-06-04 RCSB
852 "Modify descriptor" 2011-06-04 RCSB
852 "Modify synonyms" 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 852
_pdbx_chem_comp_synonyms.name RU85052
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##