data_86S # _chem_comp.id 86S _chem_comp.name ;[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H26 N10 O15 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-01-09 _chem_comp.pdbx_modified_date 2017-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 708.426 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 86S _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5UED _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 86S PA P1 P 0 1 N N N -2.603 44.648 42.482 1.276 -3.338 -0.835 PA 86S 1 86S O1A O1 O 0 1 N N N -3.246 43.237 42.159 0.822 -3.852 -2.147 O1A 86S 2 86S O2A O2 O 0 1 N N N -1.602 44.502 43.750 2.111 -4.483 -0.071 O2A 86S 3 86S O6A O3 O 0 1 N N N -8.531 46.568 39.127 9.500 1.969 3.432 O6A 86S 4 86S C6A C1 C 0 1 N N N -7.572 47.326 38.989 8.841 2.286 2.457 C6A 86S 5 86S N1A N1 N 0 1 N N N -7.918 48.655 38.660 8.931 3.530 1.935 N1A 86S 6 86S C2A C2 C 0 1 N N N -6.883 49.531 38.471 8.189 3.874 0.844 C2A 86S 7 86S N2A N2 N 0 1 N N N -7.184 50.785 38.158 8.302 5.143 0.336 N2A 86S 8 86S N3A N3 N 0 1 N N N -5.613 49.175 38.674 7.370 3.024 0.266 N3A 86S 9 86S C4A C3 C 0 1 Y N N -5.321 47.901 39.006 7.228 1.776 0.727 C4A 86S 10 86S C5A C4 C 0 1 Y N N -6.294 47.003 39.140 7.967 1.360 1.840 C5A 86S 11 86S N7A N4 N 0 1 Y N N -5.723 45.846 39.486 7.638 0.068 2.082 N7A 86S 12 86S C8A C5 C 0 1 Y N N -4.417 45.999 39.493 6.766 -0.326 1.200 C8A 86S 13 86S N9A N5 N 0 1 Y N N -4.132 47.282 39.220 6.475 0.699 0.347 N9A 86S 14 86S C1D C6 C 0 1 N N R -2.804 47.922 39.133 5.541 0.649 -0.780 C1D 86S 15 86S O4D O4 O 0 1 N N N -1.732 46.883 39.285 4.553 -0.384 -0.570 O4D 86S 16 86S C2D C7 C 0 1 N N R -2.507 49.036 40.140 6.278 0.232 -2.072 C2D 86S 17 86S O2D O5 O 0 1 N N N -1.530 49.955 39.631 6.600 1.381 -2.858 O2D 86S 18 86S C3D C8 C 0 1 N N S -1.822 48.241 41.229 5.261 -0.664 -2.813 C3D 86S 19 86S O3D O6 O 0 1 N N N -1.017 49.095 42.053 4.922 -0.095 -4.080 O3D 86S 20 86S C4D C9 C 0 1 N N R -0.935 47.234 40.437 4.029 -0.682 -1.882 C4D 86S 21 86S C5D C10 C 0 1 N N N -0.629 45.958 41.246 3.374 -2.065 -1.892 C5D 86S 22 86S O5D O7 O 0 1 N N N -1.761 45.088 41.199 2.213 -2.049 -1.059 O5D 86S 23 86S O3A O8 O 0 1 N N N -3.795 45.773 42.866 -0.004 -2.925 0.051 O3A 86S 24 86S PG P2 P 0 1 N N N -4.849 45.370 44.079 -1.420 -3.623 0.364 PG 86S 25 86S O1G O9 O 0 1 N N N -6.108 45.989 43.862 -1.942 -4.254 -0.869 O1G 86S 26 86S O2G O10 O 0 1 N N N -4.669 43.978 44.651 -1.226 -4.746 1.501 O2G 86S 27 86S O5E O11 O 0 1 N N N -3.744 46.453 44.685 -2.464 -2.511 0.880 O5E 86S 28 86S C5E C11 C 0 1 N N N -4.032 47.858 44.919 -3.839 -2.797 1.142 C5E 86S 29 86S C4E C12 C 0 1 N N R -4.755 48.675 43.788 -4.544 -1.524 1.616 C4E 86S 30 86S O4E O12 O 0 1 N N N -5.344 48.195 42.435 -4.659 -0.580 0.529 O4E 86S 31 86S C3E C13 C 0 1 N N S -5.986 49.362 44.416 -6.000 -1.836 2.024 C3E 86S 32 86S O3E O13 O 0 1 N N N -5.556 50.336 45.324 -6.102 -1.986 3.442 O3E 86S 33 86S C2E C14 C 0 1 N N R -6.620 50.059 43.261 -6.796 -0.598 1.553 C2E 86S 34 86S O2E O14 O 0 1 N N N -5.758 51.099 42.695 -7.415 0.053 2.664 O2E 86S 35 86S C1E C15 C 0 1 N N R -6.657 48.932 42.281 -5.725 0.315 0.915 C1E 86S 36 86S N9B N6 N 0 1 Y N N -7.908 48.037 42.312 -6.271 0.996 -0.262 N9B 86S 37 86S C4B C16 C 0 1 Y N N -9.134 48.451 42.032 -6.931 2.194 -0.271 C4B 86S 38 86S N3B N7 N 0 1 N N N -9.560 49.703 41.762 -7.279 3.074 0.675 N3B 86S 39 86S C2B C17 C 0 1 N N N -10.878 49.845 41.541 -7.929 4.175 0.372 C2B 86S 40 86S N2B N8 N 0 1 N N N -11.400 51.046 41.314 -8.264 5.049 1.376 N2B 86S 41 86S N1B N9 N 0 1 N N N -11.744 48.733 41.578 -8.280 4.476 -0.910 N1B 86S 42 86S C6B C18 C 0 1 N N N -11.248 47.460 41.815 -7.963 3.634 -1.919 C6B 86S 43 86S O6B O15 O 0 1 N N N -12.015 46.458 41.845 -8.272 3.894 -3.069 O6B 86S 44 86S C5B C19 C 0 1 Y N N -9.948 47.362 42.051 -7.263 2.445 -1.607 C5B 86S 45 86S N7B N10 N 0 1 Y N N -9.197 46.294 42.309 -6.796 1.405 -2.340 N7B 86S 46 86S C8B C20 C 0 1 Y N N -7.958 46.704 42.428 -6.207 0.553 -1.552 C8B 86S 47 86S H1 H1 H 0 1 N N N -1.598 43.600 44.049 2.440 -4.216 0.798 H1 86S 48 86S H2 H2 H 0 1 N N N -8.872 48.942 38.570 9.526 4.180 2.339 H2 86S 49 86S H3 H3 H 0 1 N N N -6.458 51.467 38.073 8.903 5.781 0.752 H3 86S 50 86S H4 H4 H 0 1 N N N -8.137 51.048 38.007 7.780 5.403 -0.440 H4 86S 51 86S H5 H5 H 0 1 N N N -3.693 45.221 39.686 6.330 -1.313 1.157 H5 86S 52 86S H6 H6 H 0 1 N N N -2.704 48.357 38.128 5.056 1.616 -0.914 H6 86S 53 86S H7 H7 H 0 1 N N N -3.426 49.525 40.496 7.180 -0.332 -1.832 H7 86S 54 86S H8 H8 H 0 1 N N N -1.366 50.633 40.276 7.064 1.177 -3.681 H8 86S 55 86S H9 H9 H 0 1 N N N -2.565 47.691 41.825 5.660 -1.670 -2.942 H9 86S 56 86S H10 H10 H 0 1 N N N -0.596 48.578 42.730 5.672 -0.004 -4.683 H10 86S 57 86S H11 H11 H 0 1 N N N 0.004 47.723 40.139 3.312 0.080 -2.186 H11 86S 58 86S H12 H12 H 0 1 N N N 0.244 45.449 40.813 3.086 -2.323 -2.911 H12 86S 59 86S H13 H13 H 0 1 N N N -0.415 46.227 42.291 4.081 -2.805 -1.516 H13 86S 60 86S H14 H14 H 0 1 N N N -5.520 43.598 44.835 -0.886 -4.403 2.339 H14 86S 61 86S H15 H15 H 0 1 N N N -3.072 48.357 45.117 -4.315 -3.158 0.230 H15 86S 62 86S H16 H16 H 0 1 N N N -4.666 47.914 45.816 -3.911 -3.562 1.916 H16 86S 63 86S H17 H17 H 0 1 N N N -4.062 49.490 43.532 -4.002 -1.080 2.451 H17 86S 64 86S H18 H18 H 0 1 N N N -6.663 48.620 44.865 -6.355 -2.735 1.520 H18 86S 65 86S H19 H19 H 0 1 N N N -5.147 49.915 46.071 -6.996 -2.183 3.753 H19 86S 66 86S H20 H20 H 0 1 N N N -7.627 50.431 43.503 -7.544 -0.883 0.813 H20 86S 67 86S H21 H21 H 0 1 N N N -5.712 51.834 43.295 -8.053 -0.499 3.136 H21 86S 68 86S H22 H22 H 0 1 N N N -6.637 49.389 41.281 -5.365 1.044 1.641 H22 86S 69 86S H23 H23 H 0 1 N N N -10.811 51.854 41.307 -8.744 5.866 1.168 H23 86S 70 86S H24 H24 H 0 1 N N N -12.382 51.142 41.151 -8.022 4.849 2.294 H24 86S 71 86S H25 H25 H 0 1 N N N -12.725 48.864 41.432 -8.759 5.297 -1.100 H25 86S 72 86S H26 H26 H 0 1 N N N -7.105 46.063 42.595 -5.741 -0.368 -1.870 H26 86S 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 86S N2A C2A SING N N 1 86S C2A N1A SING N N 2 86S C2A N3A DOUB N N 3 86S N1A C6A SING N N 4 86S N3A C4A SING N N 5 86S C6A O6A DOUB N N 6 86S C6A C5A SING N N 7 86S C4A C5A DOUB Y N 8 86S C4A N9A SING Y N 9 86S C1D N9A SING N N 10 86S C1D O4D SING N N 11 86S C1D C2D SING N N 12 86S C5A N7A SING Y N 13 86S N9A C8A SING Y N 14 86S O4D C4D SING N N 15 86S N7A C8A DOUB Y N 16 86S O2D C2D SING N N 17 86S C2D C3D SING N N 18 86S C4D C3D SING N N 19 86S C4D C5D SING N N 20 86S O5D C5D SING N N 21 86S O5D PA SING N N 22 86S C3D O3D SING N N 23 86S N2B C2B SING N N 24 86S C2B N1B SING N N 25 86S C2B N3B DOUB N N 26 86S N1B C6B SING N N 27 86S N3B C4B SING N N 28 86S C6B O6B DOUB N N 29 86S C6B C5B SING N N 30 86S C4B C5B DOUB Y N 31 86S C4B N9B SING Y N 32 86S C5B N7B SING Y N 33 86S O1A PA DOUB N N 34 86S C1E N9B SING N N 35 86S C1E O4E SING N N 36 86S C1E C2E SING N N 37 86S N7B C8B DOUB Y N 38 86S N9B C8B SING Y N 39 86S O4E C4E SING N N 40 86S PA O3A SING N N 41 86S PA O2A SING N N 42 86S O2E C2E SING N N 43 86S O3A PG SING N N 44 86S C2E C3E SING N N 45 86S C4E C3E SING N N 46 86S C4E C5E SING N N 47 86S O1G PG DOUB N N 48 86S PG O2G SING N N 49 86S PG O5E SING N N 50 86S C3E O3E SING N N 51 86S O5E C5E SING N N 52 86S O2A H1 SING N N 53 86S N1A H2 SING N N 54 86S N2A H3 SING N N 55 86S N2A H4 SING N N 56 86S C8A H5 SING N N 57 86S C1D H6 SING N N 58 86S C2D H7 SING N N 59 86S O2D H8 SING N N 60 86S C3D H9 SING N N 61 86S O3D H10 SING N N 62 86S C4D H11 SING N N 63 86S C5D H12 SING N N 64 86S C5D H13 SING N N 65 86S O2G H14 SING N N 66 86S C5E H15 SING N N 67 86S C5E H16 SING N N 68 86S C4E H17 SING N N 69 86S C3E H18 SING N N 70 86S O3E H19 SING N N 71 86S C2E H20 SING N N 72 86S O2E H21 SING N N 73 86S C1E H22 SING N N 74 86S N2B H23 SING N N 75 86S N2B H24 SING N N 76 86S N1B H25 SING N N 77 86S C8B H26 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 86S SMILES ACDLabs 12.01 "P(OP(O)(OCC1C(O)C(O)C(O1)n2cnc3c2N=C(NC3=O)N)=O)(O)(=O)OCC6OC(n5c4N=C(NC(=O)c4nc5)N)C(C6O)O" 86S InChI InChI 1.03 ;InChI=1S/C20H26N10O15P2/c21-19-25-13-7(15(35)27-19)23-3-29(13)17-11(33)9(31)5(43-17)1-41-46(37,38)45-47(39,40)42-2-6-10(32)12(34)18(44-6)30-4-24-8-14(30)26-20(22)28-16(8)36/h3-6,9-12,17-18,31-34H,1-2H2,(H,37,38)(H,39,40)(H3,21,25,27,35)(H3,22,26,28,36)/t5-,6-,9-,10-,11-,12-,17-,18-/m1/s1 ; 86S InChIKey InChI 1.03 LFEYGVXBDRXHGF-MHARETSRSA-N 86S SMILES_CANONICAL CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6C(=O)NC(=Nc56)N)[C@@H](O)[C@H]3O" 86S SMILES CACTVS 3.385 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6C(=O)NC(=Nc56)N)[CH](O)[CH]3O" 86S SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5N=C(NC6=O)N)O)O)O)O)N=C(NC2=O)N" 86S SMILES "OpenEye OEToolkits" 2.0.6 "c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5N=C(NC6=O)N)O)O)O)O)N=C(NC2=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 86S "SYSTEMATIC NAME" ACDLabs 12.01 "bis{[(2R,3S,4R,5R)-5-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl} dihydrogen diphosphate (non-preferred name)" 86S "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ;[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate ; # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 86S "Create component" 2017-01-09 RCSB 86S "Initial release" 2017-07-05 RCSB #