data_87Y # _chem_comp.id 87Y _chem_comp.name "7,8-DIHYDRO-6-HYDROXYMETHYL-7-METHYL-7-[2-PHENYLETHYL]-PTERIN" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H19 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ;2-AMINO-6-HYDROXYMETHYL-7-METHYL-7-PHENETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE; 7,8-DIHYDRO-6-HYDROXYMETHYL-7-METHYL-7-[2-PHENYLETHYL]-PTERIN ; _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2000-01-24 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 313.354 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 87Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1DY3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 87Y N2 N2 N 0 1 Y N N 16.636 30.962 15.501 -2.022 0.675 3.301 N2 87Y 1 87Y C3 C3 C 0 1 Y N N 17.399 31.751 16.293 -0.719 0.995 3.143 C3 87Y 2 87Y O8 O8 O 0 1 N N N 18.472 32.210 15.789 -0.226 1.928 3.755 O8 87Y 3 87Y C7 C7 C 0 1 Y N N 16.942 31.867 17.673 0.055 0.225 2.253 C7 87Y 4 87Y N10 N10 N 0 1 N N N 17.718 32.599 18.607 1.373 0.499 2.037 N10 87Y 5 87Y C12 C12 C 0 1 N N N 17.288 32.844 19.784 2.022 -0.023 1.055 C12 87Y 6 87Y C15 C15 C 0 1 N N N 17.924 33.745 20.807 3.488 0.287 0.893 C15 87Y 7 87Y O16 O16 O 0 1 N N N 19.271 33.683 20.389 3.907 1.167 1.938 O16 87Y 8 87Y C11 C11 C 0 1 N N S 15.929 32.422 20.289 1.349 -0.941 0.067 C11 87Y 9 87Y C14 C14 C 0 1 N N N 15.764 32.037 21.735 0.850 -0.127 -1.128 C14 87Y 10 87Y C13 C13 C 0 1 N N N 15.181 33.836 20.108 2.347 -1.997 -0.412 C13 87Y 11 87Y N9 N9 N 0 1 N N N 15.193 31.601 19.313 0.209 -1.602 0.722 N9 87Y 12 87Y C6 C6 C 0 1 Y N N 15.741 31.402 18.103 -0.559 -0.840 1.582 C6 87Y 13 87Y N4 N4 N 0 1 Y N N 15.043 30.628 17.143 -1.849 -1.097 1.781 N4 87Y 14 87Y C1 C1 C 0 1 Y N N 15.512 30.392 15.941 -2.565 -0.366 2.613 C1 87Y 15 87Y N5 N5 N 0 1 N N N 14.825 29.597 15.134 -3.889 -0.663 2.790 N5 87Y 16 87Y C17 C17 C 0 1 N N N 16.578 30.697 21.847 0.164 -1.059 -2.128 C17 87Y 17 87Y C18 C18 C 0 1 Y N N 16.097 30.055 23.122 -0.326 -0.258 -3.306 C18 87Y 18 87Y C19 C19 C 0 1 Y N N 16.283 30.607 24.376 0.494 -0.065 -4.402 C19 87Y 19 87Y C20 C20 C 0 1 Y N N 15.882 30.041 25.589 0.043 0.669 -5.482 C20 87Y 20 87Y C21 C21 C 0 1 Y N N 15.235 28.798 25.525 -1.227 1.211 -5.468 C21 87Y 21 87Y C22 C22 C 0 1 Y N N 15.053 28.238 24.256 -2.049 1.018 -4.373 C22 87Y 22 87Y C23 C23 C 0 1 Y N N 15.459 28.797 23.039 -1.600 0.279 -3.294 C23 87Y 23 87Y H2 H2 H 0 1 N N N 16.918 30.790 14.536 -2.575 1.191 3.908 H2 87Y 24 87Y H152 2H15 H 0 0 N N N 17.488 34.768 20.890 4.063 -0.637 0.944 H152 87Y 25 87Y H151 1H15 H 0 0 N N N 17.734 33.479 21.873 3.654 0.765 -0.072 H151 87Y 26 87Y H16 H16 H 0 1 N N N 19.672 34.252 21.035 4.848 1.340 1.797 H16 87Y 27 87Y H142 2H14 H 0 0 N N N 16.067 32.825 22.462 0.140 0.624 -0.785 H142 87Y 28 87Y H141 1H14 H 0 0 N N N 14.705 31.966 22.077 1.695 0.364 -1.610 H141 87Y 29 87Y H133 3H13 H 0 0 N N N 14.177 33.524 20.480 2.701 -2.576 0.440 H133 87Y 30 87Y H132 2H13 H 0 0 N N N 15.648 34.718 20.603 1.858 -2.661 -1.124 H132 87Y 31 87Y H131 1H13 H 0 0 N N N 15.218 34.297 19.093 3.192 -1.505 -0.894 H131 87Y 32 87Y H9 H9 H 0 1 N N N 14.256 31.987 19.193 0.005 -2.536 0.556 H9 87Y 33 87Y H52 2H5 H 0 1 N N N 13.966 29.161 15.470 -4.289 -1.403 2.307 H52 87Y 34 87Y H51 1H5 H 0 1 N N N 15.447 28.866 14.789 -4.428 -0.134 3.400 H51 87Y 35 87Y H172 2H17 H 0 0 N N N 16.492 30.040 20.950 0.875 -1.811 -2.471 H172 87Y 36 87Y H171 1H17 H 0 0 N N N 17.683 30.834 21.799 -0.680 -1.551 -1.646 H171 87Y 37 87Y H19 H19 H 0 1 N N N 16.795 31.583 24.411 1.487 -0.489 -4.413 H19 87Y 38 87Y H20 H20 H 0 1 N N N 16.067 30.550 26.549 0.685 0.820 -6.338 H20 87Y 39 87Y H21 H21 H 0 1 N N N 14.884 28.282 26.434 -1.579 1.786 -6.312 H21 87Y 40 87Y H22 H22 H 0 1 N N N 14.540 27.262 24.210 -3.042 1.441 -4.361 H22 87Y 41 87Y H23 H23 H 0 1 N N N 15.287 28.281 22.079 -2.241 0.128 -2.438 H23 87Y 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 87Y N2 C3 SING Y N 1 87Y N2 C1 SING Y N 2 87Y N2 H2 SING N N 3 87Y C3 O8 DOUB N N 4 87Y C3 C7 SING Y N 5 87Y C7 N10 SING N N 6 87Y C7 C6 DOUB Y N 7 87Y N10 C12 DOUB N N 8 87Y C12 C15 SING N N 9 87Y C12 C11 SING N N 10 87Y C15 O16 SING N N 11 87Y C15 H152 SING N N 12 87Y C15 H151 SING N N 13 87Y O16 H16 SING N N 14 87Y C11 C14 SING N N 15 87Y C11 C13 SING N N 16 87Y C11 N9 SING N N 17 87Y C14 C17 SING N N 18 87Y C14 H142 SING N N 19 87Y C14 H141 SING N N 20 87Y C13 H133 SING N N 21 87Y C13 H132 SING N N 22 87Y C13 H131 SING N N 23 87Y N9 C6 SING N N 24 87Y N9 H9 SING N N 25 87Y C6 N4 SING Y N 26 87Y N4 C1 DOUB Y N 27 87Y C1 N5 SING N N 28 87Y N5 H52 SING N N 29 87Y N5 H51 SING N N 30 87Y C17 C18 SING N N 31 87Y C17 H172 SING N N 32 87Y C17 H171 SING N N 33 87Y C18 C19 DOUB Y N 34 87Y C18 C23 SING Y N 35 87Y C19 C20 SING Y N 36 87Y C19 H19 SING N N 37 87Y C20 C21 DOUB Y N 38 87Y C20 H20 SING N N 39 87Y C21 C22 SING Y N 40 87Y C21 H21 SING N N 41 87Y C22 C23 DOUB Y N 42 87Y C22 H22 SING N N 43 87Y C23 H23 SING N N 44 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 87Y SMILES ACDLabs 10.04 "O=C1C=2N=C(CO)C(NC=2N=C(N1)N)(CCc3ccccc3)C" 87Y SMILES_CANONICAL CACTVS 3.341 "C[C@@]1(CCc2ccccc2)NC3=C(N=C1CO)C(=O)NC(=N3)N" 87Y SMILES CACTVS 3.341 "C[C]1(CCc2ccccc2)NC3=C(N=C1CO)C(=O)NC(=N3)N" 87Y SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@@]1(C(=NC2=C(N1)N=C(NC2=O)N)CO)CCc3ccccc3" 87Y SMILES "OpenEye OEToolkits" 1.5.0 "CC1(C(=NC2=C(N1)N=C(NC2=O)N)CO)CCc3ccccc3" 87Y InChI InChI 1.03 "InChI=1S/C16H19N5O2/c1-16(8-7-10-5-3-2-4-6-10)11(9-22)18-12-13(21-16)19-15(17)20-14(12)23/h2-6,22H,7-9H2,1H3,(H4,17,19,20,21,23)/t16-/m0/s1" 87Y InChIKey InChI 1.03 XMFJTCGUDFSWSW-INIZCTEOSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 87Y "SYSTEMATIC NAME" ACDLabs 10.04 "(7S)-2-amino-6-(hydroxymethyl)-7-methyl-7-(2-phenylethyl)-7,8-dihydropteridin-4(3H)-one" 87Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(7S)-2-amino-6-(hydroxymethyl)-7-methyl-7-phenethyl-3,8-dihydropteridin-4-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 87Y "Create component" 2000-01-24 EBI 87Y "Modify descriptor" 2011-06-04 RCSB 87Y "Modify synonyms" 2020-06-05 PDBE # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 87Y "2-AMINO-6-HYDROXYMETHYL-7-METHYL-7-PHENETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE" ? ? 2 87Y "7,8-DIHYDRO-6-HYDROXYMETHYL-7-METHYL-7-[2-PHENYLETHYL]-PTERIN" ? ? ##