2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]cytidine
non-polymer
HETAIN
C9 H17 N4 O12 P3
0
2017-01-19
2017-07-21
N
REL
466.172
8CP
N
Corina
N
5UGP
RCSB
N1
N
0
1
N
N
N
6.770
7.972
10.405
5.069
-0.636
0.674
N1
8CP
1
C1
C
0
1
N
N
N
7.612
8.317
9.332
5.251
-0.771
-0.653
C2
8CP
2
N2
N
0
1
N
N
N
8.931
8.319
9.510
6.022
-1.738
-1.146
N3
8CP
3
C2
C
0
1
N
N
N
9.473
7.981
10.683
6.633
-2.595
-0.339
C4
8CP
4
C3
C
0
1
N
N
N
8.650
7.634
11.789
6.464
-2.481
1.056
C5
8CP
5
C4
C
0
1
N
N
N
7.299
7.590
11.573
5.676
-1.493
1.542
C6
8CP
6
O1
O
0
1
N
N
N
7.102
8.621
8.256
4.700
0.005
-1.416
O2
8CP
7
N3
N
0
1
N
N
N
10.804
7.974
10.852
7.428
-3.590
-0.860
N4
8CP
8
C5
C
0
1
N
N
R
5.362
7.914
10.083
4.219
0.441
1.187
C1'
8CP
9
C6
C
0
1
N
N
N
4.973
6.524
9.656
4.797
1.818
0.790
C2'
8CP
10
C7
C
0
1
N
N
S
4.471
5.806
10.907
3.548
2.676
0.488
C3'
8CP
11
C8
C
0
1
N
N
R
3.744
6.966
11.589
2.364
1.717
0.738
C4'
8CP
12
O2
O
0
1
N
N
N
4.592
8.127
11.264
2.917
0.394
0.563
O4'
8CP
13
O3
O
0
1
N
N
N
3.599
4.734
10.546
3.483
3.794
1.376
O3'
8CP
14
C9
C
0
1
N
N
N
3.552
6.809
13.088
1.251
1.968
-0.282
C5'
8CP
15
O4
O
0
1
N
N
N
4.816
6.649
13.661
0.121
1.154
0.036
O5'
8CP
16
P1
P
0
1
N
N
N
5.074
5.498
14.787
-1.237
1.161
-0.830
PA
8CP
17
O5
O
0
1
N
N
N
6.430
5.702
15.412
-1.752
2.545
-0.928
O1A
8CP
18
O6
O
0
1
N
N
N
3.954
5.538
15.803
-0.934
0.595
-2.306
O2A
8CP
19
O7
O
0
1
N
N
N
5.073
4.086
13.975
-2.336
0.229
-0.112
O3A
8CP
20
P2
P
0
1
N
N
N
3.919
3.021
13.784
-3.928
0.052
-0.272
PB
8CP
21
O8
O
0
1
N
N
N
2.604
3.456
14.231
-4.658
1.452
0.041
O1B
8CP
22
O9
O
0
1
N
N
N
3.845
2.607
12.329
-4.241
-0.369
-1.656
O2B
8CP
23
P3
P
0
1
N
N
N
4.135
1.525
16.298
-6.137
-1.336
0.672
PG
8CP
24
O10
O
0
1
N
N
N
3.172
0.467
16.539
-6.826
-0.060
0.968
O1G
8CP
25
O11
O
0
1
N
N
N
5.483
1.173
16.976
-6.618
-2.461
1.719
O2G
8CP
26
O12
O
0
1
N
N
N
3.642
2.888
16.804
-6.497
-1.806
-0.825
O3G
8CP
27
N4
N
0
1
N
N
N
4.372
1.653
14.640
-4.473
-1.119
0.807
N3B
8CP
28
H1
H
0
1
N
N
N
9.073
7.414
12.758
6.955
-3.171
1.726
H1
8CP
29
H2
H
0
1
N
N
N
6.648
7.240
12.360
5.530
-1.385
2.607
H2
8CP
30
H3
H
0
1
N
N
N
11.406
8.224
10.093
7.542
-3.667
-1.821
H3
8CP
31
H4
H
0
1
N
N
N
11.194
7.719
11.737
7.873
-4.215
-0.268
H4
8CP
32
H5
H
0
1
N
N
N
5.104
8.640
9.298
4.124
0.365
2.270
H5
8CP
33
H6
H
0
1
N
N
N
4.176
6.569
8.899
5.364
2.246
1.617
H6
8CP
34
H7
H
0
1
N
N
N
5.845
5.997
9.240
5.423
1.728
-0.098
H7
8CP
35
H8
H
0
1
N
N
N
5.316
5.463
11.523
3.557
3.011
-0.549
H8
8CP
36
H9
H
0
1
N
N
N
2.758
7.090
11.117
1.983
1.840
1.752
H9
8CP
37
H10
H
0
1
N
N
N
3.699
4.021
11.166
4.234
4.398
1.304
H10
8CP
38
H11
H
0
1
N
N
N
3.064
7.705
13.500
0.962
3.018
-0.253
H11
8CP
39
H12
H
0
1
N
N
N
2.931
5.925
13.296
1.610
1.717
-1.280
H12
8CP
40
H13
H
0
1
N
N
N
4.316
5.688
16.668
-0.593
-0.309
-2.319
H13
8CP
41
H14
H
0
1
N
N
N
1.986
3.386
13.513
-4.496
1.789
0.933
H14
8CP
42
H15
H
0
1
N
N
N
5.408
0.333
17.414
-7.569
-2.638
1.696
H15
8CP
43
H16
H
0
1
N
N
N
2.780
2.790
17.190
-6.079
-2.637
-1.087
H16
8CP
44
H17
H
0
1
N
N
N
3.879
0.887
14.226
-3.983
-1.991
0.673
H17
8CP
45
doub
N
N
1
sing
N
N
2
sing
N
N
3
doub
N
N
4
sing
N
N
5
sing
N
N
6
sing
N
N
7
sing
N
N
8
sing
N
N
9
sing
N
N
10
sing
N
N
11
sing
N
N
12
sing
N
N
13
sing
N
N
14
doub
N
N
15
sing
N
N
16
doub
N
N
17
sing
N
N
18
sing
N
N
19
sing
N
N
20
sing
N
N
21
sing
N
N
22
sing
N
N
23
sing
N
N
24
doub
N
N
25
sing
N
N
26
doub
N
N
27
sing
N
N
28
sing
N
N
29
sing
N
N
30
sing
N
N
31
sing
N
N
32
sing
N
N
33
sing
N
N
34
sing
N
N
35
sing
N
N
36
sing
N
N
37
sing
N
N
38
sing
N
N
39
sing
N
N
40
sing
N
N
41
sing
N
N
42
sing
N
N
43
sing
N
N
44
sing
N
N
45
sing
N
N
46
N1(C=CC(=NC1=O)N)C2OC(C(C2)O)COP(=O)(O)OP(O)(NP(=O)(O)O)=O
InChI=1S/C9H17N4O12P3/c10-7-1-2-13(9(15)11-7)8-3-5(14)6(24-8)4-23-28(21,22)25-27(19,20)12-26(16,17)18/h1-2,5-6,8,14H,3-4H2,(H,21,22)(H2,10,11,15)(H4,12,16,17,18,19,20)/t5-,6+,8+/m0/s1
ICHPBSCTWPZUQK-SHYZEUOFSA-N
NC1=NC(=O)N(C=C1)[C@H]2C[C@H](O)[C@@H](CO[P](O)(=O)O[P](O)(=O)N[P](O)(O)=O)O2
NC1=NC(=O)N(C=C1)[CH]2C[CH](O)[CH](CO[P](O)(=O)O[P](O)(=O)N[P](O)(O)=O)O2
C1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)COP(=O)(O)OP(=O)(NP(=O)(O)O)O)O
C1C(C(OC1N2C=CC(=NC2=O)N)COP(=O)(O)OP(=O)(NP(=O)(O)O)O)O
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]cytidine
[[[[(2~{R},3~{S},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]amino]phosphonic acid
RCSB
RCSB