data_8CT
#
_chem_comp.id 8CT
_chem_comp.name "(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C40 H56"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-10-12
_chem_comp.pdbx_modified_date 2018-11-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 536.873
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 8CT
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag Y
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6IGZ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8CT C01 C1 C 0 1 N N N 139.109 246.229 205.187 6.826 1.759 -0.663 C01 8CT 1
8CT C02 C2 C 0 1 N N N 139.217 247.771 205.014 7.713 0.639 -1.141 C02 8CT 2
8CT C03 C3 C 0 1 N N N 140.383 248.373 204.131 7.738 -0.481 -0.438 C03 8CT 3
8CT C04 C4 C 0 1 N N N 140.274 249.782 203.786 8.581 -1.670 -0.795 C04 8CT 4
8CT C05 C5 C 0 1 N N N 139.724 250.671 205.059 9.043 -1.570 -2.251 C05 8CT 5
8CT C06 C6 C 0 1 N N N 138.501 250.233 205.448 9.644 -0.176 -2.476 C06 8CT 6
8CT C07 C7 C 0 1 N N N 138.553 248.653 205.956 8.515 0.855 -2.391 C07 8CT 7
8CT C08 C8 C 0 1 N N N 141.627 250.316 203.312 9.804 -1.719 0.123 C08 8CT 8
8CT C09 C9 C 0 1 N N N 139.269 249.942 202.659 7.761 -2.948 -0.611 C09 8CT 9
8CT C10 C10 C 0 1 N N N 141.406 247.450 203.418 6.921 -0.563 0.717 C10 8CT 10
8CT C11 C11 C 0 1 N N N 141.136 246.970 202.194 5.577 -0.386 0.614 C11 8CT 11
8CT C12 C12 C 0 1 N N N 142.161 246.070 201.491 4.758 -0.551 1.745 C12 8CT 12
8CT C13 C13 C 0 1 N N N 141.788 244.907 200.873 3.409 -0.373 1.641 C13 8CT 13
8CT C14 C14 C 0 1 N N N 142.872 244.039 200.185 2.591 -0.538 2.768 C14 8CT 14
8CT C15 C15 C 0 1 N N N 142.671 242.819 199.566 1.222 -0.464 2.642 C15 8CT 15
8CT C16 C16 C 0 1 N N N 141.286 242.050 199.397 0.641 -0.339 1.374 C16 8CT 16
8CT C17 C17 C 0 1 N N N 141.119 241.291 198.280 -0.042 0.810 1.040 C17 8CT 17
8CT C18 C18 C 0 1 N N N 142.266 241.265 197.279 -0.156 1.851 1.968 C18 8CT 18
8CT C19 C19 C 0 1 N N N 142.425 240.337 196.298 -0.839 3.000 1.633 C19 8CT 19
8CT C20 C20 C 0 1 N N N 141.492 239.108 196.002 -1.420 3.125 0.366 C20 8CT 20
8CT C21 C21 C 0 1 N N N 141.458 238.661 194.719 -2.103 4.273 0.032 C21 8CT 21
8CT C22 C22 C 0 1 N N N 142.307 239.417 193.683 -2.225 5.395 1.031 C22 8CT 22
8CT C23 C23 C 0 1 N N N 140.552 237.418 194.335 -2.684 4.399 -1.238 C23 8CT 23
8CT C24 C24 C 0 1 N N N 140.792 236.503 193.313 -3.579 3.465 -1.674 C24 8CT 24
8CT C25 C25 C 0 1 N N N 141.993 236.523 192.310 -4.015 2.449 -0.805 C25 8CT 25
8CT C26 C26 C 0 1 N N N 142.071 235.580 191.301 -4.979 1.580 -1.205 C26 8CT 26
8CT C27 C27 C 0 1 N N N 140.960 234.525 191.180 -5.583 1.705 -2.580 C27 8CT 27
8CT C28 C28 C 0 1 N N N 143.264 235.586 190.249 -5.418 0.555 -0.329 C28 8CT 28
8CT C29 C29 C 0 1 N N N 143.040 234.913 189.039 -6.367 -0.300 -0.723 C29 8CT 29
8CT C30 C30 C 0 1 N N R 144.034 234.800 187.855 -6.834 -1.389 0.208 C30 8CT 30
8CT C31 C31 C 0 1 N N N 145.420 234.608 188.274 -8.303 -1.225 0.469 C31 8CT 31
8CT C32 C32 C 0 1 N N N 146.226 233.361 187.691 -9.222 -1.952 -0.081 C32 8CT 32
8CT C33 C33 C 0 1 N N N 145.679 232.705 186.537 -8.947 -3.065 -1.049 C33 8CT 33
8CT C34 C34 C 0 1 N N N 144.067 232.484 186.751 -7.526 -2.941 -1.605 C34 8CT 34
8CT C35 C35 C 0 1 N N N 143.415 233.684 186.800 -6.560 -2.753 -0.429 C35 8CT 35
8CT C36 C36 C 0 1 N N N 143.470 234.286 185.411 -6.782 -3.861 0.602 C36 8CT 36
8CT C37 C37 C 0 1 N N N 141.916 233.400 187.154 -5.117 -2.803 -0.936 C37 8CT 37
8CT C38 C38 C 0 1 N N N 146.263 235.834 188.621 -8.734 -0.149 1.431 C38 8CT 38
8CT C39 C39 C 0 1 N N N 140.168 242.123 200.453 0.764 -1.461 0.375 C39 8CT 39
8CT C40 C40 C 0 1 N N N 143.634 246.499 201.471 5.369 -0.925 3.070 C40 8CT 40
8CT H1 H1 H 0 1 N N N 138.247 245.991 205.827 6.979 2.637 -1.291 H1 8CT 41
8CT H2 H2 H 0 1 N N N 138.975 245.758 204.202 5.783 1.448 -0.722 H2 8CT 42
8CT H3 H3 H 0 1 N N N 140.029 245.847 205.654 7.074 2.004 0.370 H3 8CT 43
8CT H6 H6 H 0 1 N N N 140.428 250.575 205.899 9.799 -2.330 -2.448 H6 8CT 44
8CT H7 H7 H 0 1 N N N 139.652 251.727 204.760 8.192 -1.714 -2.916 H7 8CT 45
8CT H8 H8 H 0 1 N N N 138.142 250.863 206.276 10.391 0.029 -1.710 H8 8CT 46
8CT H9 H9 H 0 1 N N N 137.806 250.313 204.599 10.105 -0.132 -3.463 H9 8CT 47
8CT H10 H10 H 0 1 N N N 137.522 248.298 206.100 7.864 0.756 -3.260 H10 8CT 48
8CT H11 H11 H 0 1 N N N 139.092 248.611 206.914 8.945 1.857 -2.376 H11 8CT 49
8CT H12 H12 H 0 1 N N N 142.368 250.207 204.118 9.477 -1.802 1.159 H12 8CT 50
8CT H13 H13 H 0 1 N N N 141.958 249.746 202.431 10.418 -2.582 -0.135 H13 8CT 51
8CT H14 H14 H 0 1 N N N 141.529 251.379 203.046 10.388 -0.807 -0.001 H14 8CT 52
8CT H15 H15 H 0 1 N N N 138.289 249.562 202.984 6.933 -2.954 -1.320 H15 8CT 53
8CT H16 H16 H 0 1 N N N 139.180 251.006 202.395 8.396 -3.816 -0.786 H16 8CT 54
8CT H17 H17 H 0 1 N N N 139.609 249.374 201.781 7.368 -2.984 0.405 H17 8CT 55
8CT H18 H18 H 0 1 N N N 142.335 247.194 203.906 7.366 -0.767 1.680 H18 8CT 56
8CT H19 H19 H 0 1 N N N 140.204 247.215 201.707 5.140 -0.117 -0.336 H19 8CT 57
8CT H20 H20 H 0 1 N N N 140.753 244.599 200.865 2.971 -0.104 0.691 H20 8CT 58
8CT H21 H21 H 0 1 N N N 143.881 244.424 200.189 3.036 -0.722 3.735 H21 8CT 59
8CT H22 H22 H 0 1 N N N 143.545 242.337 199.154 0.596 -0.504 3.521 H22 8CT 60
8CT H23 H23 H 0 1 N N N 140.211 240.731 198.111 -0.490 0.906 0.062 H23 8CT 61
8CT H24 H24 H 0 1 N N N 143.011 242.044 197.354 0.292 1.755 2.946 H24 8CT 62
8CT H25 H25 H 0 1 N N N 143.284 240.457 195.654 -0.927 3.804 2.349 H25 8CT 63
8CT H26 H26 H 0 1 N N N 140.906 238.641 196.780 -1.332 2.322 -0.350 H26 8CT 64
8CT H27 H27 H 0 1 N N N 142.847 240.237 194.179 -1.429 6.120 0.862 H27 8CT 65
8CT H28 H28 H 0 1 N N N 143.030 238.725 193.226 -3.193 5.883 0.912 H28 8CT 66
8CT H29 H29 H 0 1 N N N 141.651 239.830 192.903 -2.143 4.993 2.040 H29 8CT 67
8CT H30 H30 H 0 1 N N N 139.660 237.266 194.925 -2.424 5.234 -1.871 H30 8CT 68
8CT H31 H31 H 0 1 N N N 140.079 235.700 193.202 -3.953 3.507 -2.686 H31 8CT 69
8CT H32 H32 H 0 1 N N N 142.763 237.275 192.406 -3.582 2.359 0.181 H32 8CT 70
8CT H33 H33 H 0 1 N N N 140.225 234.671 191.985 -5.007 1.106 -3.286 H33 8CT 71
8CT H34 H34 H 0 1 N N N 140.461 234.628 190.205 -6.613 1.350 -2.559 H34 8CT 72
8CT H35 H35 H 0 1 N N N 141.399 233.520 191.262 -5.566 2.750 -2.891 H35 8CT 73
8CT H36 H36 H 0 1 N N N 144.200 236.084 190.456 -4.986 0.465 0.656 H36 8CT 74
8CT H37 H37 H 0 1 N N N 142.083 234.427 188.921 -6.800 -0.210 -1.708 H37 8CT 75
8CT H38 H38 H 0 1 N N N 143.985 235.760 187.320 -6.290 -1.316 1.150 H38 8CT 76
8CT H40 H40 H 0 1 N N N 147.146 233.024 188.146 -10.251 -1.744 0.172 H40 8CT 77
8CT H42 H42 H 0 1 N N N 146.169 231.729 186.402 -9.052 -4.023 -0.538 H42 8CT 78
8CT H43 H43 H 0 1 N N N 145.849 233.327 185.646 -9.662 -3.015 -1.870 H43 8CT 79
8CT H44 H44 H 0 1 N N N 143.670 231.892 185.913 -7.266 -3.848 -2.151 H44 8CT 80
8CT H45 H45 H 0 1 N N N 143.899 231.944 187.694 -7.467 -2.080 -2.270 H45 8CT 81
8CT H46 H46 H 0 1 N N N 142.953 235.257 185.411 -6.602 -4.831 0.138 H46 8CT 82
8CT H47 H47 H 0 1 N N N 144.520 234.429 185.115 -6.094 -3.724 1.436 H47 8CT 83
8CT H48 H48 H 0 1 N N N 142.977 233.608 184.698 -7.808 -3.818 0.967 H48 8CT 84
8CT H49 H49 H 0 1 N N N 141.853 232.962 188.161 -4.960 -2.008 -1.664 H49 8CT 85
8CT H50 H50 H 0 1 N N N 141.348 234.342 187.128 -4.433 -2.669 -0.098 H50 8CT 86
8CT H51 H51 H 0 1 N N N 141.493 232.697 186.421 -4.931 -3.769 -1.406 H51 8CT 87
8CT H52 H52 H 0 1 N N N 145.611 236.629 189.012 -8.902 0.780 0.886 H52 8CT 88
8CT H53 H53 H 0 1 N N N 147.008 235.563 189.384 -9.658 -0.452 1.925 H53 8CT 89
8CT H54 H54 H 0 1 N N N 146.777 236.193 187.717 -7.956 0.004 2.178 H54 8CT 90
8CT H55 H55 H 0 1 N N N 140.483 242.780 201.277 -0.121 -2.095 0.431 H55 8CT 91
8CT H56 H56 H 0 1 N N N 139.254 242.526 199.992 0.851 -1.045 -0.629 H56 8CT 92
8CT H57 H57 H 0 1 N N N 139.967 241.115 200.844 1.650 -2.053 0.601 H57 8CT 93
8CT H58 H58 H 0 1 N N N 143.747 247.450 202.012 5.630 -0.020 3.618 H58 8CT 94
8CT H59 H59 H 0 1 N N N 144.248 245.726 201.957 4.652 -1.507 3.650 H59 8CT 95
8CT H60 H60 H 0 1 N N N 143.964 246.628 200.430 6.267 -1.520 2.901 H60 8CT 96
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8CT C36 C35 SING N N 1
8CT C33 C34 SING N N 2
8CT C33 C32 SING N N 3
8CT C34 C35 SING N N 4
8CT C35 C37 SING N N 5
8CT C35 C30 SING N N 6
8CT C32 C31 DOUB N N 7
8CT C30 C31 SING N N 8
8CT C30 C29 SING N N 9
8CT C31 C38 SING N N 10
8CT C29 C28 DOUB N E 11
8CT C28 C26 SING N N 12
8CT C27 C26 SING N N 13
8CT C26 C25 DOUB N E 14
8CT C25 C24 SING N N 15
8CT C24 C23 DOUB N Z 16
8CT C22 C21 SING N N 17
8CT C23 C21 SING N N 18
8CT C21 C20 DOUB N E 19
8CT C20 C19 SING N N 20
8CT C19 C18 DOUB N Z 21
8CT C18 C17 SING N N 22
8CT C17 C16 DOUB N Z 23
8CT C16 C15 SING N N 24
8CT C16 C39 SING N N 25
8CT C15 C14 DOUB N Z 26
8CT C14 C13 SING N N 27
8CT C13 C12 DOUB N E 28
8CT C40 C12 SING N N 29
8CT C12 C11 SING N N 30
8CT C11 C10 DOUB N E 31
8CT C09 C04 SING N N 32
8CT C08 C04 SING N N 33
8CT C10 C03 SING N N 34
8CT C04 C03 SING N N 35
8CT C04 C05 SING N N 36
8CT C03 C02 DOUB N N 37
8CT C02 C01 SING N N 38
8CT C02 C07 SING N N 39
8CT C05 C06 SING N N 40
8CT C06 C07 SING N N 41
8CT C01 H1 SING N N 42
8CT C01 H2 SING N N 43
8CT C01 H3 SING N N 44
8CT C05 H6 SING N N 45
8CT C05 H7 SING N N 46
8CT C06 H8 SING N N 47
8CT C06 H9 SING N N 48
8CT C07 H10 SING N N 49
8CT C07 H11 SING N N 50
8CT C08 H12 SING N N 51
8CT C08 H13 SING N N 52
8CT C08 H14 SING N N 53
8CT C09 H15 SING N N 54
8CT C09 H16 SING N N 55
8CT C09 H17 SING N N 56
8CT C10 H18 SING N N 57
8CT C11 H19 SING N N 58
8CT C13 H20 SING N N 59
8CT C14 H21 SING N N 60
8CT C15 H22 SING N N 61
8CT C17 H23 SING N N 62
8CT C18 H24 SING N N 63
8CT C19 H25 SING N N 64
8CT C20 H26 SING N N 65
8CT C22 H27 SING N N 66
8CT C22 H28 SING N N 67
8CT C22 H29 SING N N 68
8CT C23 H30 SING N N 69
8CT C24 H31 SING N N 70
8CT C25 H32 SING N N 71
8CT C27 H33 SING N N 72
8CT C27 H34 SING N N 73
8CT C27 H35 SING N N 74
8CT C28 H36 SING N N 75
8CT C29 H37 SING N N 76
8CT C30 H38 SING N N 77
8CT C32 H40 SING N N 78
8CT C33 H42 SING N N 79
8CT C33 H43 SING N N 80
8CT C34 H44 SING N N 81
8CT C34 H45 SING N N 82
8CT C36 H46 SING N N 83
8CT C36 H47 SING N N 84
8CT C36 H48 SING N N 85
8CT C37 H49 SING N N 86
8CT C37 H50 SING N N 87
8CT C37 H51 SING N N 88
8CT C38 H52 SING N N 89
8CT C38 H53 SING N N 90
8CT C38 H54 SING N N 91
8CT C39 H55 SING N N 92
8CT C39 H56 SING N N 93
8CT C39 H57 SING N N 94
8CT C40 H58 SING N N 95
8CT C40 H59 SING N N 96
8CT C40 H60 SING N N 97
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8CT SMILES ACDLabs 12.01 "CC=1CCCC(C=1[C@H]=[C@H]C(=[C@H][C@H]=[C@H]C(C)=[C@H][C@H]=[C@H][C@H]=C(C)[C@H]=[C@H][C@H]=C(C)[C@H]=[C@H]C2C(C)=CCCC2(C)C)C)(C)C"
8CT InChI InChI 1.03 "InChI=1S/C40H56/c1-31(19-13-21-33(3)25-27-37-35(5)23-15-29-39(37,7)8)17-11-12-18-32(2)20-14-22-34(4)26-28-38-36(6)24-16-30-40(38,9)10/h11-14,17-23,25-28,37H,15-16,24,29-30H2,1-10H3/b12-11-,19-13-,20-14-,27-25+,28-26+,31-17+,32-18-,33-21+,34-22+/t37-/m0/s1"
8CT InChIKey InChI 1.03 ANVAOWXLWRTKGA-GZSHKXEASA-N
8CT SMILES_CANONICAL CACTVS 3.385 "CC(=C/C=C\C=C(C)/C=C\C=C(C)\C=C\C1=C(C)CCCC1(C)C)\C=C/C=C(C)/C=C/[C@H]2C(=CCCC2(C)C)C"
8CT SMILES CACTVS 3.385 "CC(=CC=CC=C(C)C=CC=C(C)C=CC1=C(C)CCCC1(C)C)C=CC=C(C)C=C[CH]2C(=CCCC2(C)C)C"
8CT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC1=C(C(CCC1)(C)C)/C=C/C(=C/C=C\C(=C/C=C\C=C(/C)\C=C/C=C(\C)/C=C/[C@H]2C(=CCCC2(C)C)C)\C)/C"
8CT SMILES "OpenEye OEToolkits" 2.0.6 "CC1=C(C(CCC1)(C)C)C=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC2C(=CCCC2(C)C)C)C)C"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
8CT "SYSTEMATIC NAME" ACDLabs 12.01 "(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene"
8CT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1,3,3-trimethyl-2-[(1~{E},3~{E},5~{Z},7~{Z},9~{Z},11~{E},13~{Z},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R})-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8CT "Create component" 2018-10-12 PDBJ
8CT "Initial release" 2018-11-21 RCSB
##